RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 RFC4P35249 363 aa9.2□□□□□ -0.94
SNX13-201ENST00000409076 CYP2J2P51589 502 aa9.2□□□□□ -0.94
SNX13-201ENST00000409076 MTM1Q13496 603 aa9.2□□□□□ -0.94
SNX13-201ENST00000409076 PRR16Q569H4 304 aa9.2□□□□□ -0.94
SNX13-201ENST00000409076 MFSD14BQ5SR56 506 aa9.2□□□□□ -0.94
SNX13-201ENST00000409076 GPBP1Q86WP2 473 aa9.2□□□□□ -0.94
SNX13-201ENST00000409076 IRF2BP1Q8IU81 584 aa9.2□□□□□ -0.94
SNX13-201ENST00000409076 ADSSL1Q8N142 457 aa9.2□□□□□ -0.94
SNX13-201ENST00000409076 LRRC15Q8TF66 581 aa9.2□□□□□ -0.94
SNX13-201ENST00000409076 DDX12PQ92771 950 aa9.2□□□□□ -0.94
SNX13-201ENST00000409076 NSUN4Q96CB9 384 aaKnown RBP9.2□□□□□ -0.94
SNX13-201ENST00000409076 CEP95Q96GE4 821 aa9.2□□□□□ -0.94
SNX13-201ENST00000409076 OSBPL9Q96SU4 736 aa9.2□□□□□ -0.94
SNX13-201ENST00000409076 JPH2Q9BR39 696 aaPredicted RBP9.2□□□□□ -0.94
SNX13-201ENST00000409076 TACO1Q9BSH4 297 aaKnown RBP9.2□□□□□ -0.94
SNX13-201ENST00000409076 CELF4Q9BZC1 486 aaKnown RBP9.2□□□□□ -0.94
SNX13-201ENST00000409076 MYO1AQ9UBC5 1043 aa9.2□□□□□ -0.94
SNX13-201ENST00000409076 PTPN22Q9Y2R2 807 aa9.2□□□□□ -0.94
SNX13-201ENST00000409076 JRKLQ9Y4A0 524 aa9.2□□□□□ -0.94
SNX13-201ENST00000409076 RFX7Q2KHR2 1363 aa9.2□□□□□ -0.94
SNX13-201ENST00000409076 SLIT1O75093 1534 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 SLC37A4O43826 429 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 YY1P25490 414 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 RDXP35241 583 aaKnown RBP9.19□□□□□ -0.94
SNX13-201ENST00000409076 ERFP50548 548 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 CCDC38Q502W7 563 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 IQCEQ6IPM2 695 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 OTUD6AQ7L8S5 288 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 APTXQ7Z2E3 356 aaKnown RBP9.19□□□□□ -0.94
SNX13-201ENST00000409076 KCNK18Q7Z418 384 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 NEK8Q86SG6 692 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 SPATA4Q8NEY3 305 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 RIOK1Q9BRS2 568 aaKnown RBP9.19□□□□□ -0.94
SNX13-201ENST00000409076 FGFBP2Q9BYJ0 223 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 MYO5AQ9Y4I1 1855 aaKnown RBP9.19□□□□□ -0.94
SNX13-201ENST00000409076 CYTH3O43739 400 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 GDF11O95390 407 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 BAG3O95817 575 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 BMP15O95972 392 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 ZNF746Q6NUN9 644 aaPredicted RBP9.19□□□□□ -0.94
SNX13-201ENST00000409076 PIGOQ8TEQ8 1089 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 NOX5Q96PH1 765 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 ARHGAP20Q9P2F6 1191 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 SALL4Q9UJQ4 1053 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 FBXO3Q9UK99 471 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 CD2APQ9Y5K6 639 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 ZNF804BA4D1E1 1349 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 LAMA4Q16363 1823 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 POTEFA5A3E0 1075 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 POTEIP0CG38 1075 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 FGFR2P21802 821 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 IRX3P78415 501 aaPredicted RBP9.19□□□□□ -0.94
SNX13-201ENST00000409076 AMPD3Q01432 767 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 POTEGQ6S5H5 508 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 POTEEQ6S8J3 1075 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 ZNF384Q8TF68 577 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 DYDC1Q8WWB3 177 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 MTMR8Q96EF0 704 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 CCDC114Q96M63 670 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 IL17RBQ9NRM6 502 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 STK36Q9NRP7 1315 aa9.19□□□□□ -0.94
SNX13-201ENST00000409076 BICDL2A1A5D9 508 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 CCNE1P24864 410 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 KRT71Q3SY84 523 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 NAALADL2Q58DX5 795 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 SFMBT2Q5VUG0 894 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 LARP4BQ92615 738 aaKnown RBP9.18□□□□□ -0.94
SNX13-201ENST00000409076 FAM212AQ96EL1 285 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 TRIM9Q9C026 710 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 ATP8A1Q9Y2Q0 1164 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 ZNF263O14978 683 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 GFPT2O94808 682 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 SYF2O95926 243 aaKnown RBP9.18□□□□□ -0.94
SNX13-201ENST00000409076 CDR1P51861 262 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 TRIP13Q15645 432 aaPredicted RBP9.18□□□□□ -0.94
SNX13-201ENST00000409076 FAM114A1Q8IWE2 563 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 FAM84AQ96KN4 292 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 ZIM3Q96PE6 472 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 FAM118BQ9BPY3 351 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 SEMA6BQ9H3T3 888 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 PCIF1Q9H4Z3 704 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 PANK4Q9NVE7 773 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 C5P01031 1676 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 GCNT3O95395 438 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 GLI1P08151 1106 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 KLRC1P26715 233 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 CTNNA1P35221 906 aaKnown RBP9.18□□□□□ -0.94
SNX13-201ENST00000409076 LONP1P36776 959 aaKnown RBP9.18□□□□□ -0.94
SNX13-201ENST00000409076 ZBED6P86452 979 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 ADAM9Q13443 819 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 MSL1Q68DK7 614 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 CNNM4Q6P4Q7 775 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 CPLX4Q7Z7G2 160 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 PNMA8AQ86V59 439 aaPredicted RBP9.18□□□□□ -0.94
SNX13-201ENST00000409076 KIAA0825Q8IV33 1275 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 KLHL34Q8N239 644 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 ZNF579Q8NAF0 562 aaKnown RBP9.18□□□□□ -0.94
SNX13-201ENST00000409076 RETREG2Q8NC44 543 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 MDM1Q8TC05 714 aa9.18□□□□□ -0.94
SNX13-201ENST00000409076 CEP89Q96ST8 783 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms