RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 ERVK-21P61565 698 aa14.39□□□□□ -0.11
APOBEC3B-204ENST00000407298 STXBP2Q15833 593 aa14.39□□□□□ -0.11
APOBEC3B-204ENST00000407298 PUS10Q3MIT2 529 aaKnown RBP14.39□□□□□ -0.11
APOBEC3B-204ENST00000407298 CCDC178Q5BJE1 867 aa14.39□□□□□ -0.11
APOBEC3B-204ENST00000407298 SEPT14Q6ZU15 432 aa14.39□□□□□ -0.11
APOBEC3B-204ENST00000407298 PPP1R13LQ8WUF5 828 aa14.39□□□□□ -0.11
APOBEC3B-204ENST00000407298 TANC1Q9C0D5 1861 aa14.39□□□□□ -0.11
APOBEC3B-204ENST00000407298 TET1Q8NFU7 2136 aa14.39□□□□□ -0.11
APOBEC3B-204ENST00000407298 BRWD1Q9NSI6 2320 aa14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 TRIP12Q14669 1992 aaPredicted RBP14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 LCHNA4D1U4 455 aa14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 ARIH2O95376 493 aa14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 SNHG28P0DPA3 235 aa14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 PTK7Q13308 1070 aa14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 LY6KQ17RY6 165 aa14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 USH1GQ495M9 461 aa14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 MCMDC2Q4G0Z9 681 aa14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 VPS53Q5VIR6 699 aa14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 MFSD6Q6ZSS7 791 aa14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 GDPD5Q8WTR4 605 aa14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 RNF41Q9H4P4 317 aaPredicted RBP14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 UBE2ZQ9H832 354 aaPredicted RBP14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 SUGCTQ9HAC7 445 aa14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 GTF2IRD1Q9UHL9 959 aa14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 INSL6Q9Y581 213 aa14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 ABCB11O95342 1321 aa14.38□□□□□ -0.11
APOBEC3B-204ENST00000407298 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.37□□□□□ -0.11
APOBEC3B-204ENST00000407298 ALADP13716 330 aa14.37□□□□□ -0.11
APOBEC3B-204ENST00000407298 DEFB103AP81534 67 aa14.37□□□□□ -0.11
APOBEC3B-204ENST00000407298 ARHGAP1Q07960 439 aa14.37□□□□□ -0.11
APOBEC3B-204ENST00000407298 LAMC2Q13753 1193 aa14.37□□□□□ -0.11
APOBEC3B-204ENST00000407298 LEXMQ3ZCV2 418 aa14.37□□□□□ -0.11
APOBEC3B-204ENST00000407298 CHST3Q7LGC8 479 aa14.37□□□□□ -0.11
APOBEC3B-204ENST00000407298 ESR2Q92731 530 aa14.37□□□□□ -0.11
APOBEC3B-204ENST00000407298 EMID1Q96A84 441 aaPredicted RBP14.37□□□□□ -0.11
APOBEC3B-204ENST00000407298 RMDN3Q96TC7 470 aa14.37□□□□□ -0.11
APOBEC3B-204ENST00000407298 MRPL11Q9Y3B7 192 aaKnown RBP14.37□□□□□ -0.11
APOBEC3B-204ENST00000407298 ZMYM6O95789 1325 aa14.37□□□□□ -0.11
APOBEC3B-204ENST00000407298 EMSYQ7Z589 1322 aa14.37□□□□□ -0.11
APOBEC3B-204ENST00000407298 MUC6Q6W4X9 2439 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 LINC01553A4QN01 128 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 PRR33A8MZF0 331 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 NBNO60934 754 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 EIF3JO75822 258 aaKnown RBP14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 PSEN2P49810 448 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 MFAP1P55081 439 aaKnown RBP14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 GPNMBQ14956 572 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 PTPROQ16827 1216 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 ARHGEF16Q5VV41 709 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 KCNV1Q6PIU1 500 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 DGKHQ86XP1 1220 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 GJD3Q8N144 294 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 FBXO22Q8NEZ5 403 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 PPTC7Q8NI37 304 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 SYTL5Q8TDW5 730 aaPredicted RBP14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 OTUD7AQ8TE49 926 aaPredicted RBP14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 DHX38Q92620 1227 aaKnown RBP14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 KAT2BQ92831 832 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 SAMD11Q96NU1 681 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 CTAGE1Q96RT6 745 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 HDAC6Q9UBN7 1215 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 MTUS1Q9ULD2 1270 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 FAM50BQ9Y247 325 aa14.36□□□□□ -0.11
APOBEC3B-204ENST00000407298 AMHP03971 560 aa14.35□□□□□ -0.11
APOBEC3B-204ENST00000407298 HSPD1P10809 573 aaKnown RBP14.35□□□□□ -0.11
APOBEC3B-204ENST00000407298 SSTR3P32745 418 aaPredicted RBP14.35□□□□□ -0.11
APOBEC3B-204ENST00000407298 MFSD10Q14728 455 aa14.35□□□□□ -0.11
APOBEC3B-204ENST00000407298 IQCA1Q86XH1 822 aa14.35□□□□□ -0.11
APOBEC3B-204ENST00000407298 FAM178BQ8IXR5 827 aa14.35□□□□□ -0.11
APOBEC3B-204ENST00000407298 DHX37Q8IY37 1157 aaKnown RBP14.35□□□□□ -0.11
APOBEC3B-204ENST00000407298 TAAR1Q96RJ0 339 aa14.35□□□□□ -0.11
APOBEC3B-204ENST00000407298 ALG1Q9BT22 464 aa14.35□□□□□ -0.11
APOBEC3B-204ENST00000407298 C11orf16Q9NQ32 467 aa14.35□□□□□ -0.11
APOBEC3B-204ENST00000407298 DDX41Q9UJV9 622 aaKnown RBP14.35□□□□□ -0.11
APOBEC3B-204ENST00000407298 MRVI1Q9Y6F6 885 aa14.35□□□□□ -0.11
APOBEC3B-204ENST00000407298 FAM86C2PA6NEL3 165 aa14.34□□□□□ -0.11
APOBEC3B-204ENST00000407298 PPFIA4O75335 1185 aa14.34□□□□□ -0.11
APOBEC3B-204ENST00000407298 LGR5O75473 907 aa14.34□□□□□ -0.11
APOBEC3B-204ENST00000407298 F2P00734 622 aa14.34□□□□□ -0.11
APOBEC3B-204ENST00000407298 KCNA5P22460 613 aa14.34□□□□□ -0.11
APOBEC3B-204ENST00000407298 CDC37Q16543 378 aaPredicted RBP14.34□□□□□ -0.11
APOBEC3B-204ENST00000407298 CSPP1Q1MSJ5 1256 aa14.34□□□□□ -0.11
APOBEC3B-204ENST00000407298 KIAA0753Q2KHM9 967 aa14.34□□□□□ -0.11
APOBEC3B-204ENST00000407298 SPRED2Q7Z698 418 aa14.34□□□□□ -0.11
APOBEC3B-204ENST00000407298 TMCO2Q7Z6W1 182 aaPredicted RBP14.34□□□□□ -0.11
APOBEC3B-204ENST00000407298 KHSRPQ92945 711 aaKnown RBP eCLIP14.34□□□□□ -0.11
APOBEC3B-204ENST00000407298 MRPL38Q96DV4 380 aaKnown RBP14.34□□□□□ -0.11
APOBEC3B-204ENST00000407298 UBA5Q9GZZ9 404 aa14.34□□□□□ -0.11
APOBEC3B-204ENST00000407298 SALL3Q9BXA9 1300 aa14.34□□□□□ -0.11
APOBEC3B-204ENST00000407298 NR3C2P08235 984 aa14.33□□□□□ -0.12
APOBEC3B-204ENST00000407298 GOLGA8HP0CJ92 632 aa14.33□□□□□ -0.12
APOBEC3B-204ENST00000407298 HAND2P61296 217 aa14.33□□□□□ -0.12
APOBEC3B-204ENST00000407298 TIGD5Q53EQ6 642 aa14.33□□□□□ -0.12
APOBEC3B-204ENST00000407298 ASPRV1Q53RT3 343 aa14.33□□□□□ -0.12
APOBEC3B-204ENST00000407298 ZNF618Q5T7W0 954 aa14.33□□□□□ -0.12
APOBEC3B-204ENST00000407298 ANKRD45Q5TZF3 282 aa14.33□□□□□ -0.12
APOBEC3B-204ENST00000407298 PTCRAQ6ISU1 281 aaPredicted RBP14.33□□□□□ -0.12
APOBEC3B-204ENST00000407298 FAM117BQ6P1L5 589 aa14.33□□□□□ -0.12
APOBEC3B-204ENST00000407298 FBXO11Q86XK2 927 aa14.33□□□□□ -0.12
APOBEC3B-204ENST00000407298 ADGRF4Q8IZF3 695 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms