RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SMC1BQ8NDV3 1235 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 NETO1Q8TDF5 533 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 UBE2FQ969M7 185 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 CHMP4CQ96CF2 233 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 CHAMP1Q96JM3 812 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 FCRL2Q96LA5 508 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 HSPA12BQ96MM6 686 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 AP5S1Q9NUS5 200 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 PCDHA2Q9Y5H9 948 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 H7BY64 318 aa6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 KIF3BO15066 747 aa6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 FKTNO75072 461 aa6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 KPNA1P52294 538 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 CRY1Q16526 586 aa6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 SYDE2Q5VT97 1194 aa6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 HLA-DQA1Q5Y7H0 255 aa6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 ABHD17CQ6PCB6 329 aa6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 ZBTB46Q86UZ6 589 aa6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 PASD1Q8IV76 773 aa6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 CNTD1Q8N815 330 aa6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 C2orf69Q8N8R5 385 aa6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 SMAD5Q99717 465 aaKnown RBP6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 LRRC4CQ9HCJ2 640 aa6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 ADGRE2Q9UHX3 823 aa6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 COQ6Q9Y2Z9 468 aa6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 PCDHA11Q9Y5I1 949 aa6.32□□□□□ -1.4
HMGB3P18-201ENST00000406327 ZNF891A8MT65 544 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 WDR64B1ANS9 1081 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 PRC1O43663 620 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 MSCO60682 206 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 IGLV1-40P01703 118 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 CKMP06732 381 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 LCP1P13796 627 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 ADCYAP1R1P41586 468 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 DNM2P50570 870 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 SESN3P58005 492 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 EGR3Q06889 387 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 MCL1Q07820 350 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 LCE1DQ5T752 114 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 WAPLQ7Z5K2 1190 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 CREG2Q8IUH2 290 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 FAM181AQ8N9Y4 354 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 ASB11Q8WXH4 323 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 CAMKK2Q96RR4 588 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 IPPKQ9H8X2 491 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 CATSPERZQ9NTU4 200 aa6.31□□□□□ -1.4
HMGB3P18-201ENST00000406327 PITPNM2Q9BZ72 1349 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 H7C1D1 291 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 K7ESF4 209 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 TRAF5O00463 557 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 CYP26A1O43174 497 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 TSPAN6O43657 245 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 FBXO21O94952 628 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 RPL10P27635 214 aaKnown RBP6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 SPIRE1Q08AE8 756 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 PIN1Q13526 163 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 HLTFQ14527 1009 aaKnown RBP eCLIP6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 CCSAPQ6IQ19 270 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 EP400NLQ6ZTU2 488 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 LHFPL2Q6ZUX7 228 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 OVCH1Q7RTY7 1134 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 NXPE1Q8N323 547 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 EFHBQ8N7U6 833 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 SHKBP1Q8TBC3 707 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 TMEM169Q96HH4 297 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 HRASLS5Q96KN8 279 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 GPR101Q96P66 508 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 BOCQ9BWV1 1114 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 CRTAC1Q9NQ79 661 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 AASDHPPTQ9NRN7 309 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 SEMA3GQ9NS98 782 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 THG1LQ9NWX6 298 aaKnown RBP6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 CLDND1Q9NY35 253 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 TNFRSF10DQ9UBN6 386 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 TRHDEQ9UKU6 1024 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 COA3Q9Y2R0 106 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 NUB1Q9Y5A7 615 aa6.3□□□□□ -1.4
HMGB3P18-201ENST00000406327 ARID4BQ4LE39 1312 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 WASHC2AQ641Q2 1341 aa6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 CCDC194A0A1B0GVG4 234 aa6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 TMEM82A0PJX8 343 aa6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 PTPDC1A2A3K4 754 aa6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 C7orf72A4D263 438 aa6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 U2AF1L5P0DN76 240 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 GNAT1P11488 350 aa6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 MECP2P51608 486 aaKnown RBP6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 TBX4P57082 545 aa6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 LACTBP83111 547 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 U2AF1Q01081 240 aaKnown RBP eCLIP6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 TEKQ02763 1124 aa6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 DUSP4Q13115 394 aa6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 ZNF174Q15697 407 aa6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 INF2Q27J81 1249 aa6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 CPNE8Q86YQ8 564 aa6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 WDR75Q8IWA0 830 aaKnown RBP6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 MISP3Q96FF7 219 aa6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 EMC7Q9NPA0 242 aa6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 ERVK13-1Q9NX77 482 aa6.29□□□□□ -1.4
HMGB3P18-201ENST00000406327 PIM2Q9P1W9 311 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms