RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 TRAPPC3LQ5T215 181 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 COG1Q8WTW3 980 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 HDAC7Q8WUI4 952 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 EXOC4Q96A65 974 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 NUP58Q9BVL2 599 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 NDST4Q9H3R1 872 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 RIC8AQ9NPQ8 531 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 FAN1Q9Y2M0 1017 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 ZNFX1Q9P2E3 1918 aaKnown RBP10.97□□□□□ -0.65
MSH2-202ENST00000406134 PVALEFA0A1B0GWK0 134 aa10.96□□□□□ -0.65
MSH2-202ENST00000406134 TRIM21P19474 475 aaKnown RBP10.96□□□□□ -0.65
MSH2-202ENST00000406134 ATP2B4P23634 1241 aa10.96□□□□□ -0.65
MSH2-202ENST00000406134 RFC4P35249 363 aa10.96□□□□□ -0.65
MSH2-202ENST00000406134 ZNF543Q08ER8 600 aa10.96□□□□□ -0.65
MSH2-202ENST00000406134 PPP4R3AQ6IN85 833 aa10.96□□□□□ -0.65
MSH2-202ENST00000406134 DYMQ7RTS9 669 aa10.96□□□□□ -0.65
MSH2-202ENST00000406134 GPIHBP1Q8IV16 184 aa10.96□□□□□ -0.65
MSH2-202ENST00000406134 GUF1Q8N442 669 aaKnown RBP10.96□□□□□ -0.65
MSH2-202ENST00000406134 DDX12PQ92771 950 aa10.96□□□□□ -0.65
MSH2-202ENST00000406134 STK17AQ9UEE5 414 aa10.96□□□□□ -0.65
MSH2-202ENST00000406134 HPCAL4Q9UM19 191 aa10.96□□□□□ -0.65
MSH2-202ENST00000406134 LRRC53A6NM62 1247 aa10.96□□□□□ -0.65
MSH2-202ENST00000406134 POLRMTO00411 1230 aaKnown RBP10.96□□□□□ -0.65
MSH2-202ENST00000406134 EIF6P56537 245 aaKnown RBP10.96□□□□□ -0.65
MSH2-202ENST00000406134 STIM1Q13586 685 aa10.96□□□□□ -0.65
MSH2-202ENST00000406134 PDIA5Q14554 519 aa10.96□□□□□ -0.65
MSH2-202ENST00000406134 FOXR2Q6PJQ5 311 aa10.96□□□□□ -0.65
MSH2-202ENST00000406134 EHD2Q9NZN4 543 aa10.96□□□□□ -0.65
MSH2-202ENST00000406134 GGA1Q9UJY5 639 aa10.96□□□□□ -0.65
MSH2-202ENST00000406134 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.96□□□□□ -0.66
MSH2-202ENST00000406134 ANO9A1A5B4 782 aa10.96□□□□□ -0.66
MSH2-202ENST00000406134 TARSL2A2RTX5 802 aaKnown RBP10.96□□□□□ -0.66
MSH2-202ENST00000406134 RBAK-RBAKDNI3L0D1 243 aa10.96□□□□□ -0.66
MSH2-202ENST00000406134 LDHCP07864 332 aa10.96□□□□□ -0.66
MSH2-202ENST00000406134 SPIRE1Q08AE8 756 aa10.96□□□□□ -0.66
MSH2-202ENST00000406134 C2orf54Q08AI8 447 aa10.96□□□□□ -0.66
MSH2-202ENST00000406134 LRRC41Q15345 812 aa10.96□□□□□ -0.66
MSH2-202ENST00000406134 ZFPM1Q8IX07 1006 aa10.96□□□□□ -0.66
MSH2-202ENST00000406134 CAPZA3Q96KX2 299 aa10.96□□□□□ -0.66
MSH2-202ENST00000406134 SMARCAL1Q9NZC9 954 aa10.96□□□□□ -0.66
MSH2-202ENST00000406134 hCG_1984214I3L0E3 225 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 PJA2O43164 708 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 ZMYND10O75800 440 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 FOXR1Q6PIV2 292 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 DPP8Q6V1X1 898 aaPredicted RBP10.95□□□□□ -0.66
MSH2-202ENST00000406134 ZNF713Q8N859 430 aaPredicted RBP10.95□□□□□ -0.66
MSH2-202ENST00000406134 KCTD10Q9H3F6 313 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 RNF216Q9NWF9 866 aaPredicted RBP10.95□□□□□ -0.66
MSH2-202ENST00000406134 SNX12Q9UMY4 172 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 PCDHA13Q9Y5I0 950 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 PCDHAC2Q9Y5I4 1007 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 ERCC3P19447 782 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 HOXD13P35453 343 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 KIF11P52732 1056 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 TUBB4BP68371 445 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 CERS3Q8IU89 383 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 SIAH1Q8IUQ4 282 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 RASSF8Q8NHQ8 419 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 OLIG1Q8TAK6 271 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 AENQ8WTP8 325 aaKnown RBP10.95□□□□□ -0.66
MSH2-202ENST00000406134 LCMT1Q9UIC8 334 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 FRMD3A2A2Y4 597 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 EIF4A3P38919 411 aaKnown RBP10.95□□□□□ -0.66
MSH2-202ENST00000406134 MTIF2P46199 727 aaKnown RBP10.95□□□□□ -0.66
MSH2-202ENST00000406134 ADCY7P51828 1080 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 KRT83P78385 493 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 COASYQ13057 564 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 MAN2A1Q16706 1144 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 ASPRV1Q53RT3 343 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 ARSHQ5FYA8 562 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 SV2BQ7L1I2 683 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 MBOAT7Q96N66 472 aa10.95□□□□□ -0.66
MSH2-202ENST00000406134 FAM207AQ9NSI2 230 aaPredicted RBP10.95□□□□□ -0.66
MSH2-202ENST00000406134 MAGEC2Q9UBF1 373 aaPredicted RBP10.95□□□□□ -0.66
MSH2-202ENST00000406134 MYH11P35749 1972 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 NPHP3-ACAD11A0A0J9YXS1 232 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 MACROD2A1Z1Q3 448 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 MOCS3O95396 460 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 SERPINB2P05120 415 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 ZBTB48P10074 688 aaPredicted RBP10.94□□□□□ -0.66
MSH2-202ENST00000406134 PDXDC1Q6P996 788 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 RIN2Q8WYP3 895 aaPredicted RBP10.94□□□□□ -0.66
MSH2-202ENST00000406134 VIPAS39Q9H9C1 493 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 SEC63Q9UGP8 760 aaKnown RBP10.94□□□□□ -0.66
MSH2-202ENST00000406134 UTRNP46939 3433 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 FER1L6Q2WGJ9 1857 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 BCAS3Q9H6U6 928 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 KCNMB3Q9NPA1 279 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 GPCPD1Q9NPB8 672 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 VPS18Q9P253 973 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 MYO3BQ8WXR4 1341 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 PNMA6FA0A0J9YX94 578 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 USP17L10C9JJH3 530 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 PES1O00541 588 aaKnown RBP10.94□□□□□ -0.66
MSH2-202ENST00000406134 RPS6KA5O75582 802 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 CYLC1P35663 651 aaPredicted RBP10.94□□□□□ -0.66
MSH2-202ENST00000406134 SLC16A2P36021 539 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 MARSP56192 900 aaKnown RBP10.94□□□□□ -0.66
MSH2-202ENST00000406134 LRRC63Q05C16 580 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 RAD51AP2Q09MP3 1159 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms