RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 LACRTQ9GZZ8 138 aa16.65■□□□□ 0.26
ATG4B-206ENST00000405546 ESYT3A0FGR9 886 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 FAM196BA6NMK8 535 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 KRT14P02533 472 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 KRT18P05783 430 aaKnown RBP16.64■□□□□ 0.25
ATG4B-206ENST00000405546 CCDC172P0C7W6 258 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 SEC24CP53992 1094 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 ARID5AQ03989 594 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 RC3H1Q5TC82 1133 aaKnown RBP16.64■□□□□ 0.25
ATG4B-206ENST00000405546 KRT79Q5XKE5 535 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 ZC3H12CQ9C0D7 883 aaKnown RBP16.64■□□□□ 0.25
ATG4B-206ENST00000405546 STRCQ7RTU9 1775 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 BCL9LQ86UU0 1499 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 ABCA3Q99758 1704 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 BICDL2A1A5D9 508 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 AKR1B10O60218 316 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 PLCG2P16885 1265 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 CYLC1P35663 651 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-206ENST00000405546 TTBK2Q6IQ55 1244 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 GBP6Q6ZN66 633 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 CACNA2D4Q7Z3S7 1137 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 KRT26Q7Z3Y9 468 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 C2CD5Q86YS7 1000 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 RBM17Q96I25 401 aaKnown RBP16.64■□□□□ 0.25
ATG4B-206ENST00000405546 LZTS2Q9BRK4 669 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 DUOX1Q9NRD9 1551 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 RCCD1A6NED2 376 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 LRRC10BA6NIK2 292 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 EEF1GP26641 437 aaKnown RBP16.64■□□□□ 0.25
ATG4B-206ENST00000405546 ADCY7P51828 1080 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 CACNB3P54284 484 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 AMPD2Q01433 879 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 GUCY1A3Q02108 690 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 GALNT17Q6IS24 598 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 SLF2Q8IX21 1173 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 GIMAP8Q8ND71 665 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-206ENST00000405546 NEDD1Q8NHV4 660 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 LRRC15Q8TF66 581 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 RUFY1Q96T51 708 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 CCSER1Q9C0I3 900 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 KANSL2Q9H9L4 492 aa16.64■□□□□ 0.25
ATG4B-206ENST00000405546 FAM170AA1A519 330 aa16.63■□□□□ 0.25
ATG4B-206ENST00000405546 KRT86O43790 486 aa16.63■□□□□ 0.25
ATG4B-206ENST00000405546 KIAA0754O94854 1291 aa16.63■□□□□ 0.25
ATG4B-206ENST00000405546 AKR1B1P15121 316 aa16.63■□□□□ 0.25
ATG4B-206ENST00000405546 TDRD12Q587J7 1177 aaKnown RBP16.63■□□□□ 0.25
ATG4B-206ENST00000405546 ZMYND12Q9H0C1 365 aa16.63■□□□□ 0.25
ATG4B-206ENST00000405546 TMX4Q9H1E5 349 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-206ENST00000405546 SLC24A3Q9HC58 644 aa16.63■□□□□ 0.25
ATG4B-206ENST00000405546 USP40Q9NVE5 1235 aa16.63■□□□□ 0.25
ATG4B-206ENST00000405546 KBTBD4Q9NVX7 518 aa16.63■□□□□ 0.25
ATG4B-206ENST00000405546 POLLQ9UGP5 575 aa16.63■□□□□ 0.25
ATG4B-206ENST00000405546 CCNE1P24864 410 aa16.63■□□□□ 0.25
ATG4B-206ENST00000405546 CNNM4Q6P4Q7 775 aa16.63■□□□□ 0.25
ATG4B-206ENST00000405546 NELFCDQ8IXH7 590 aa16.63■□□□□ 0.25
ATG4B-206ENST00000405546 LRRC1Q9BTT6 524 aa16.63■□□□□ 0.25
ATG4B-206ENST00000405546 KLRC4O43908 158 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 RHOBTB3O94955 611 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 ATP2B4P23634 1241 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 KRT83P78385 493 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 KIF5AQ12840 1032 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 FAM114A1Q8IWE2 563 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 GIMAP7Q8NHV1 300 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 NHEJ1Q9H9Q4 299 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-206ENST00000405546 NLRC4Q9NPP4 1024 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 CEP83Q9Y592 693 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 ITIH6Q6UXX5 1313 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 NKRFO15226 690 aaKnown RBP eCLIP16.62■□□□□ 0.259e-11■■□□□ 11.5
ATG4B-206ENST00000405546 E2F5Q15329 346 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 TSEN2Q8NCE0 465 aaKnown RBP16.62■□□□□ 0.25
ATG4B-206ENST00000405546 RAB34Q9BZG1 259 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 THAP9Q9H5L6 903 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 HPDP32754 393 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-206ENST00000405546 PPP4CP60510 307 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 TTI2Q6NXR4 508 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 RRAGAQ7L523 313 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 SUGP1Q8IWZ8 645 aaKnown RBP16.62■□□□□ 0.25
ATG4B-206ENST00000405546 PROCA1Q8NCQ7 364 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-206ENST00000405546 IFT81Q8WYA0 676 aa16.62■□□□□ 0.25
ATG4B-206ENST00000405546 DHTKD1Q96HY7 919 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-206ENST00000405546 ZC3H4Q9UPT8 1303 aaKnown RBP16.61■□□□□ 0.25
ATG4B-206ENST00000405546 ZSCAN5CA6NGD5 496 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-206ENST00000405546 TRAF5O00463 557 aa16.61■□□□□ 0.25
ATG4B-206ENST00000405546 SLC37A4O43826 429 aa16.61■□□□□ 0.25
ATG4B-206ENST00000405546 PLEKP08567 350 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-206ENST00000405546 GUCY2FP51841 1108 aa16.61■□□□□ 0.25
ATG4B-206ENST00000405546 SNAP25P60880 206 aa16.61■□□□□ 0.25
ATG4B-206ENST00000405546 SETQ01105 290 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-206ENST00000405546 PTPROQ16827 1216 aa16.61■□□□□ 0.25
ATG4B-206ENST00000405546 CCDC40Q4G0X9 1142 aa16.61■□□□□ 0.25
ATG4B-206ENST00000405546 C16orf86Q6ZW13 317 aa16.61■□□□□ 0.25
ATG4B-206ENST00000405546 LAD1O00515 517 aa16.61■□□□□ 0.25
ATG4B-206ENST00000405546 LARP4BQ92615 738 aaKnown RBP16.61■□□□□ 0.25
ATG4B-206ENST00000405546 DUSP9Q99956 384 aaKnown RBP16.61■□□□□ 0.25
ATG4B-206ENST00000405546 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-206ENST00000405546 MYH8P13535 1937 aa16.61■□□□□ 0.25
ATG4B-206ENST00000405546 IFT88Q13099 833 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 KCNB1Q14721 858 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 VPS72Q15906 364 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 TRAPPC11Q7Z392 1133 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms