RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 TESPA1A2RU30 521 aaPredicted RBP4.18□□□□□ -1.74
RTN4-208ENST00000404909 ATP2A1O14983 1001 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 MSH4O15457 936 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 CHMP2AO43633 222 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 ERCC3P19447 782 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 CYP3A7P24462 503 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 STAT6P42226 847 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 DHX8Q14562 1220 aaKnown RBP4.18□□□□□ -1.74
RTN4-208ENST00000404909 RRAGBQ5VZM2 374 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 SAPCD2Q86UD0 394 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 CABP7Q86V35 215 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 FAM43AQ8N2R8 423 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 ANKRD13CQ8N6S4 541 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 IQUBQ8NA54 791 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 LENG9Q96B70 501 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 CDK5RAP3Q96JB5 506 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 R3HDMLQ9H3Y0 253 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 CYP39A1Q9NYL5 469 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 RBPJLQ9UBG7 517 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 CCDC39Q9UFE4 941 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 MORC2Q9Y6X9 1032 aaPredicted RBP4.18□□□□□ -1.74
RTN4-208ENST00000404909 FAM237AA0A1B0GTK4 181 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 DDX39AO00148 427 aaKnown RBP4.18□□□□□ -1.74
RTN4-208ENST00000404909 KIF3CO14782 793 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 CYP3A4P08684 503 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 ZBTB48P10074 688 aaPredicted RBP4.18□□□□□ -1.74
RTN4-208ENST00000404909 CASP1P29466 404 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 CIITAP33076 1130 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 CNTN2Q02246 1040 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 TYRO3Q06418 890 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 PGM5Q15124 567 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 TKFCQ3LXA3 575 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 Q4G0T1 1027 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 KRT79Q5XKE5 535 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 NCAPH2Q6IBW4 605 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 SLFN12Q8IYM2 578 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 IGSF22Q8N9C0 903 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 SMC1BQ8NDV3 1235 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 CHST13Q8NET6 341 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 SNX29Q8TEQ0 813 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 CCDC34Q96HJ3 373 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 AK8Q96MA6 479 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 TIGD1Q96MW7 591 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 ZNF577Q9BSK1 485 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 WDR11Q9BZH6 1224 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 KCNMB3Q9NPA1 279 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 PXMP2Q9NR77 195 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 DISC1Q9NRI5 854 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 KIAA1468Q9P260 1216 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 HOOK1Q9UJC3 728 aaKnown RBP4.18□□□□□ -1.74
RTN4-208ENST00000404909 PAPPA2Q9BXP8 1791 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 PTPRFP10586 1907 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 ACTN4O43707 911 aaKnown RBP4.18□□□□□ -1.74
RTN4-208ENST00000404909 CNMDO75829 334 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 SLFN14P0C7P3 912 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 ARP10275 920 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 ITGB5P18084 799 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 PLCG1P19174 1290 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 FXR2P51116 673 aaKnown RBP eCLIP4.18□□□□□ -1.742e-7■□□□□ 9.1
RTN4-208ENST00000404909 ERVK-9P63128 1117 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 ERVK-24P63145 666 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 POSTNQ15063 836 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 ANO6Q4KMQ2 910 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 LRCH2Q5VUJ6 765 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 RGMBQ6NW40 437 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 MOXD1Q6UVY6 613 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 RIOX2Q8IUF8 465 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 TEX2Q8IWB9 1127 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 ETNPPLQ8TBG4 499 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 NSUN6Q8TEA1 469 aaKnown RBP4.18□□□□□ -1.74
RTN4-208ENST00000404909 CALML4Q96GE6 196 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 PTPN18Q99952 460 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 NUDT12Q9BQG2 462 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 PDCD2LQ9BRP1 358 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 RBSNQ9H1K0 784 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 BLZF1Q9H2G9 400 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 MAP3K20Q9NYL2 800 aaKnown RBP4.18□□□□□ -1.74
RTN4-208ENST00000404909 FBXO40Q9UH90 709 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 RABGAP1Q9Y3P9 1069 aa4.18□□□□□ -1.74
RTN4-208ENST00000404909 IGLV3-22A0A075B6J6 115 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 POTEB2H3BUK9 544 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 GAS7O60861 476 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 PGK2P07205 417 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 NR3C2P08235 984 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 PRR29P0C7W0 189 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 DEKP35659 375 aaKnown RBP4.17□□□□□ -1.74
RTN4-208ENST00000404909 CCT6AP40227 531 aaKnown RBP4.17□□□□□ -1.74
RTN4-208ENST00000404909 MRPS9P82933 396 aaKnown RBP4.17□□□□□ -1.74
RTN4-208ENST00000404909 MTMR1Q13613 665 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 PCNX4Q63HM2 1172 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 PAGE5Q96GU1 130 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 FAM20AQ96MK3 541 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 MBOAT7Q96N66 472 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 MXRA8Q9BRK3 442 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 MMTAG2Q9BU76 263 aaKnown RBP4.17□□□□□ -1.74
RTN4-208ENST00000404909 DNAJC25Q9H1X3 360 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 EFCC1Q9HA90 598 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 GRPEL1Q9HAV7 217 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 KCNH7Q9NS40 1196 aa4.17□□□□□ -1.74
RTN4-208ENST00000404909 PCDHA5Q9Y5H7 936 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms