RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 SYNGAP1Q96PV0 1343 aa14.01□□□□□ -0.17
LINC00339-201ENST00000404210 FOXN1O15353 648 aa14.01□□□□□ -0.17
LINC00339-201ENST00000404210 MAFGO15525 162 aa14.01□□□□□ -0.17
LINC00339-201ENST00000404210 EIF3JO75822 258 aaKnown RBP14.01□□□□□ -0.17
LINC00339-201ENST00000404210 IGHA2P01877 340 aa14.01□□□□□ -0.17
LINC00339-201ENST00000404210 HSPA1AP0DMV8 641 aaKnown RBP14.01□□□□□ -0.17
LINC00339-201ENST00000404210 HSPA1BP0DMV9 641 aaKnown RBP14.01□□□□□ -0.17
LINC00339-201ENST00000404210 HSPA8P11142 646 aaKnown RBP14.01□□□□□ -0.17
LINC00339-201ENST00000404210 MYCLP12524 364 aaPredicted RBP14.01□□□□□ -0.17
LINC00339-201ENST00000404210 GCFC2P16383 781 aaKnown RBP14.01□□□□□ -0.17
LINC00339-201ENST00000404210 ZNF76P36508 570 aa14.01□□□□□ -0.17
LINC00339-201ENST00000404210 CTCFP49711 727 aaPredicted RBP14.01□□□□□ -0.17
LINC00339-201ENST00000404210 UBXN2AP68543 259 aa14.01□□□□□ -0.17
LINC00339-201ENST00000404210 MRPS9P82933 396 aaKnown RBP14.01□□□□□ -0.17
LINC00339-201ENST00000404210 PRKCZQ05513 592 aa14.01□□□□□ -0.17
LINC00339-201ENST00000404210 PDE4DQ08499 809 aa14.01□□□□□ -0.17
LINC00339-201ENST00000404210 ORC2Q13416 577 aaPredicted RBP14.01□□□□□ -0.17
LINC00339-201ENST00000404210 LETM2Q2VYF4 491 aa14.01□□□□□ -0.17
LINC00339-201ENST00000404210 TTC38Q5R3I4 469 aa14.01□□□□□ -0.17
LINC00339-201ENST00000404210 OLFML2BQ68BL8 750 aa14.01□□□□□ -0.17
LINC00339-201ENST00000404210 MBOAT7Q96N66 472 aa14.01□□□□□ -0.17
LINC00339-201ENST00000404210 ZNF396Q96N95 335 aaPredicted RBP14.01□□□□□ -0.17
LINC00339-201ENST00000404210 MXRA8Q9BRK3 442 aa14.01□□□□□ -0.17
LINC00339-201ENST00000404210 TINF2Q9BSI4 451 aa14.01□□□□□ -0.17
LINC00339-201ENST00000404210 UBIAD1Q9Y5Z9 338 aa14.01□□□□□ -0.17
LINC00339-201ENST00000404210 ZSWIM8A7E2V4 1837 aa14.01□□□□□ -0.17
LINC00339-201ENST00000404210 CCNT1O60563 726 aaKnown RBP14□□□□□ -0.17
LINC00339-201ENST00000404210 ATP2B1P20020 1258 aa14□□□□□ -0.17
LINC00339-201ENST00000404210 Q4G0T1 1027 aa14□□□□□ -0.17
LINC00339-201ENST00000404210 CEP55Q53EZ4 464 aa14□□□□□ -0.17
LINC00339-201ENST00000404210 FAM173BQ6P4H8 233 aa14□□□□□ -0.17
LINC00339-201ENST00000404210 OTOP1Q7RTM1 612 aa14□□□□□ -0.17
LINC00339-201ENST00000404210 NIPA1Q7RTP0 329 aa14□□□□□ -0.17
LINC00339-201ENST00000404210 IL31RAQ8NI17 732 aa14□□□□□ -0.17
LINC00339-201ENST00000404210 JADE2Q9NQC1 790 aa14□□□□□ -0.17
LINC00339-201ENST00000404210 EIF4ENIF1Q9NRA8 985 aaKnown RBP14□□□□□ -0.17
LINC00339-201ENST00000404210 RTEL1Q9NZ71 1219 aa14□□□□□ -0.17
LINC00339-201ENST00000404210 MEIS1O00470 390 aa13.99□□□□□ -0.17
LINC00339-201ENST00000404210 SNAI1O95863 264 aaPredicted RBP13.99□□□□□ -0.17
LINC00339-201ENST00000404210 ZNF174Q15697 407 aa13.99□□□□□ -0.17
LINC00339-201ENST00000404210 ARMCX2Q7L311 632 aa13.99□□□□□ -0.17
LINC00339-201ENST00000404210 NLRX1Q86UT6 975 aa13.99□□□□□ -0.17
LINC00339-201ENST00000404210 PXYLP1Q8TE99 480 aa13.99□□□□□ -0.17
LINC00339-201ENST00000404210 GPRASP2Q96D09 838 aa13.99□□□□□ -0.17
LINC00339-201ENST00000404210 ABHD16BQ9H3Z7 469 aa13.99□□□□□ -0.17
LINC00339-201ENST00000404210 FLRT1Q9NZU1 646 aa13.99□□□□□ -0.17
LINC00339-201ENST00000404210 CFAP45Q9UL16 551 aa13.99□□□□□ -0.17
LINC00339-201ENST00000404210 TRIM17Q9Y577 477 aa13.99□□□□□ -0.17
LINC00339-201ENST00000404210 PCDHB6Q9Y5E3 794 aa13.99□□□□□ -0.17
LINC00339-201ENST00000404210 CASP8AP2Q9UKL3 1982 aa13.99□□□□□ -0.17
LINC00339-201ENST00000404210 MYH15Q9Y2K3 1946 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 IGLV3-22A0A075B6J6 115 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 FAM86B1E9PN63 330 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 WNT7AO00755 349 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 BMP15O95972 392 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 FAM86B2P0C5J1 330 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 ITGB5P18084 799 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 ICAM3P32942 547 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 LBX1P52954 281 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 CCL14Q16627 93 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 GNPTABQ3T906 1256 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 ANO1Q5XXA6 986 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 KCNV1Q6PIU1 500 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 PLA2G4DQ86XP0 818 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 RAET1EQ8TD07 263 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 CDHR1Q96JP9 859 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 INPP4AQ96PE3 977 aaPredicted RBP13.98□□□□□ -0.17
LINC00339-201ENST00000404210 VTA1Q9NP79 307 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 POLR3EQ9NVU0 708 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.98□□□□□ -0.17
LINC00339-201ENST00000404210 TFIP11Q9UBB9 837 aaKnown RBP13.98□□□□□ -0.17
LINC00339-201ENST00000404210 DDX25Q9UHL0 483 aaKnown RBP13.98□□□□□ -0.17
LINC00339-201ENST00000404210 NRBP1Q9UHY1 535 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 CEP131Q9UPN4 1083 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 KIAA1217Q5T5P2 1943 aa13.98□□□□□ -0.17
LINC00339-201ENST00000404210 MCM3APO60318 1980 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 RBM47A0AV96 593 aaKnown RBP13.97□□□□□ -0.17
LINC00339-201ENST00000404210 SPATA31C2B4DYI2 1134 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 TBX3O15119 743 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 ADCY3O60266 1144 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 RGS20O76081 388 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 TDP2O95551 362 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 TGFB3P10600 412 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 MCM7P33993 719 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 KRT85P78386 507 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 SETQ01105 290 aaPredicted RBP13.97□□□□□ -0.17
LINC00339-201ENST00000404210 DNM1Q05193 864 aaKnown RBP13.97□□□□□ -0.17
LINC00339-201ENST00000404210 SF3A1Q15459 793 aaKnown RBP13.97□□□□□ -0.17
LINC00339-201ENST00000404210 PRR16Q569H4 304 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 MFSD14CQ5VZR4 134 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 C4orf32Q8N8J7 132 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 CYP2W1Q8TAV3 490 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 TNPO1Q92973 898 aaKnown RBP13.97□□□□□ -0.17
LINC00339-201ENST00000404210 ZFP91Q96JP5 570 aaPredicted RBP13.97□□□□□ -0.17
LINC00339-201ENST00000404210 USP28Q96RU2 1077 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 WDR11Q9BZH6 1224 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 PTPN22Q9Y2R2 807 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 CLIC4Q9Y696 253 aa13.97□□□□□ -0.17
LINC00339-201ENST00000404210 MORC2Q9Y6X9 1032 aaPredicted RBP13.97□□□□□ -0.17
LINC00339-201ENST00000404210 TCHHQ07283 1943 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms