RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 CCL23P55773 120 aa17.81■□□□□ 0.44
TPM1-207ENST00000403994 TRAF1Q13077 416 aa17.81■□□□□ 0.44
TPM1-207ENST00000403994 CREB3L3Q68CJ9 461 aa17.81■□□□□ 0.44
TPM1-207ENST00000403994 NFRKBQ6P4R8 1299 aa17.81■□□□□ 0.44
TPM1-207ENST00000403994 PPP1R13LQ8WUF5 828 aa17.81■□□□□ 0.44
TPM1-207ENST00000403994 MAP3K14Q99558 947 aa17.81■□□□□ 0.44
TPM1-207ENST00000403994 SPZ1Q9BXG8 430 aa17.81■□□□□ 0.44
TPM1-207ENST00000403994 VCANP13611 3396 aa17.81■□□□□ 0.44
TPM1-207ENST00000403994 DOCK5Q9H7D0 1870 aa17.8■□□□□ 0.44
TPM1-207ENST00000403994 FRMPD4Q14CM0 1322 aa17.8■□□□□ 0.44
TPM1-207ENST00000403994 TMEM265A0A087WTH1 108 aa17.8■□□□□ 0.44
TPM1-207ENST00000403994 RGS20O76081 388 aa17.8■□□□□ 0.44
TPM1-207ENST00000403994 CYP2C9P11712 490 aa17.8■□□□□ 0.44
TPM1-207ENST00000403994 DNAJB2P25686 324 aa17.8■□□□□ 0.44
TPM1-207ENST00000403994 PGM5Q15124 567 aa17.8■□□□□ 0.44
TPM1-207ENST00000403994 NECTIN1Q15223 517 aa17.8■□□□□ 0.44
TPM1-207ENST00000403994 FAM47CQ5HY64 1035 aa17.8■□□□□ 0.44
TPM1-207ENST00000403994 ZNF365Q70YC5 407 aa17.8■□□□□ 0.44
TPM1-207ENST00000403994 SAMD3Q8N6K7 520 aa17.8■□□□□ 0.44
TPM1-207ENST00000403994 CTCFLQ8NI51 663 aaPredicted RBP17.8■□□□□ 0.44
TPM1-207ENST00000403994 PIBF1Q8WXW3 757 aa17.8■□□□□ 0.44
TPM1-207ENST00000403994 EMID1Q96A84 441 aaPredicted RBP17.8■□□□□ 0.44
TPM1-207ENST00000403994 SEMA6BQ9H3T3 888 aa17.8■□□□□ 0.44
TPM1-207ENST00000403994 MRVI1Q9Y6F6 885 aa17.8■□□□□ 0.44
TPM1-207ENST00000403994 REV3LO60673 3130 aa17.8■□□□□ 0.44
TPM1-207ENST00000403994 GCOM1H8Y6P7 765 aaPredicted RBP17.79■□□□□ 0.44
TPM1-207ENST00000403994 SUPT20HL2P0C7V6 817 aa17.79■□□□□ 0.44
TPM1-207ENST00000403994 POLR2MP0CAP2 368 aa17.79■□□□□ 0.44
TPM1-207ENST00000403994 KIF5BP33176 963 aa17.79■□□□□ 0.44
TPM1-207ENST00000403994 TMEM87BQ96K49 555 aa17.79■□□□□ 0.44
TPM1-207ENST00000403994 DDX41Q9UJV9 622 aaKnown RBP17.79■□□□□ 0.44
TPM1-207ENST00000403994 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.78■□□□□ 0.44
TPM1-207ENST00000403994 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.78■□□□□ 0.44
TPM1-207ENST00000403994 PLEKHA8P1O95397 391 aa17.78■□□□□ 0.44
TPM1-207ENST00000403994 MYCLP12524 364 aaPredicted RBP17.78■□□□□ 0.44
TPM1-207ENST00000403994 NFXL1Q6ZNB6 911 aa17.78■□□□□ 0.44
TPM1-207ENST00000403994 FCHSD1Q86WN1 690 aa17.78■□□□□ 0.44
TPM1-207ENST00000403994 SLC17A8Q8NDX2 589 aa17.78■□□□□ 0.44
TPM1-207ENST00000403994 PPTC7Q8NI37 304 aa17.78■□□□□ 0.44
TPM1-207ENST00000403994 HERVK_113Q902F9 699 aa17.78■□□□□ 0.44
TPM1-207ENST00000403994 KAT2BQ92831 832 aa17.78■□□□□ 0.44
TPM1-207ENST00000403994 VWCEQ96DN2 955 aa17.78■□□□□ 0.44
TPM1-207ENST00000403994 SCLYQ96I15 445 aa17.78■□□□□ 0.44
TPM1-207ENST00000403994 CDX2Q99626 313 aaPredicted RBP17.78■□□□□ 0.44
TPM1-207ENST00000403994 CXXC1Q9P0U4 656 aaPredicted RBP17.78■□□□□ 0.44
TPM1-207ENST00000403994 CCDC69A6NI79 296 aa17.77■□□□□ 0.44
TPM1-207ENST00000403994 RXRAP19793 462 aa17.77■□□□□ 0.44
TPM1-207ENST00000403994 UBA1P22314 1058 aaKnown RBP17.77■□□□□ 0.44
TPM1-207ENST00000403994 CCND2P30279 289 aa17.77■□□□□ 0.44
TPM1-207ENST00000403994 LIFRP42702 1097 aa17.77■□□□□ 0.44
TPM1-207ENST00000403994 PTPN11Q06124 597 aaPredicted RBP17.77■□□□□ 0.44
TPM1-207ENST00000403994 DGKDQ16760 1214 aa17.77■□□□□ 0.44
TPM1-207ENST00000403994 VSIG10LQ86VR7 867 aa17.77■□□□□ 0.44
TPM1-207ENST00000403994 RRP36Q96EU6 259 aaKnown RBP17.77■□□□□ 0.44
TPM1-207ENST00000403994 LRRC2Q9BYS8 371 aa17.77■□□□□ 0.44
TPM1-207ENST00000403994 TRIP12Q14669 1992 aaPredicted RBP17.77■□□□□ 0.43
TPM1-207ENST00000403994 PITPNM1O00562 1244 aa17.76■□□□□ 0.43
TPM1-207ENST00000403994 CDC45O75419 566 aa17.76■□□□□ 0.43
TPM1-207ENST00000403994 ZNF286BP0CG31 522 aa17.76■□□□□ 0.43
TPM1-207ENST00000403994 HOXD8P13378 290 aaPredicted RBP17.76■□□□□ 0.43
TPM1-207ENST00000403994 CHMP4BP1P59074 171 aa17.76■□□□□ 0.43
TPM1-207ENST00000403994 TIFAQ96CG3 184 aa17.76■□□□□ 0.43
TPM1-207ENST00000403994 LZTS2Q9BRK4 669 aa17.76■□□□□ 0.43
TPM1-207ENST00000403994 PBX4Q9BYU1 374 aa17.76■□□□□ 0.43
TPM1-207ENST00000403994 MTIF3Q9H2K0 278 aaKnown RBP17.76■□□□□ 0.43
TPM1-207ENST00000403994 SEC63Q9UGP8 760 aaKnown RBP17.76■□□□□ 0.43
TPM1-207ENST00000403994 TET1Q8NFU7 2136 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 SPTBN5Q9NRC6 3674 aaKnown RBP17.75■□□□□ 0.43
TPM1-207ENST00000403994 GRXCR1A8MXD5 290 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 F2P00734 622 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 FGBP02675 491 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 CALM1P0DP23 149 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 CALM2P0DP24 149 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 CALM3P0DP25 149 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 SMARCA1P28370 1054 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 PBX2P40425 430 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 LAMC2Q13753 1193 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 RNF20Q5VTR2 975 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 OTOP2Q7RTS6 562 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 SESTD1Q86VW0 696 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 RAB11FIP4Q86YS3 637 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 TMTC2Q8N394 836 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 SRBD1Q8N5C6 995 aaKnown RBP17.75■□□□□ 0.43
TPM1-207ENST00000403994 MYLIPQ8WY64 445 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 GPKOWQ92917 476 aaPredicted RBP eCLIP17.75■□□□□ 0.43
TPM1-207ENST00000403994 CTAGE1Q96RT6 745 aa17.75■□□□□ 0.43
TPM1-207ENST00000403994 PTPRSQ13332 1948 aa17.74■□□□□ 0.43
TPM1-207ENST00000403994 SORBS3O60504 671 aa17.74■□□□□ 0.43
TPM1-207ENST00000403994 GGPS1O95749 300 aa17.74■□□□□ 0.43
TPM1-207ENST00000403994 PFKMP08237 780 aa17.74■□□□□ 0.43
TPM1-207ENST00000403994 CASTP20810 708 aaKnown RBP17.74■□□□□ 0.43
TPM1-207ENST00000403994 GNAQP50148 359 aa17.74■□□□□ 0.43
TPM1-207ENST00000403994 CELF3Q5SZQ8 465 aaKnown RBP17.74■□□□□ 0.43
TPM1-207ENST00000403994 MYSM1Q5VVJ2 828 aa17.74■□□□□ 0.43
TPM1-207ENST00000403994 GDF6Q6KF10 455 aaPredicted RBP17.74■□□□□ 0.43
TPM1-207ENST00000403994 KCNV1Q6PIU1 500 aa17.74■□□□□ 0.43
TPM1-207ENST00000403994 TMTC3Q6ZXV5 915 aa17.74■□□□□ 0.43
TPM1-207ENST00000403994 SGMS1Q86VZ5 419 aa17.74■□□□□ 0.43
TPM1-207ENST00000403994 MICU3Q86XE3 530 aa17.74■□□□□ 0.43
TPM1-207ENST00000403994 DHX37Q8IY37 1157 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms