RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 TFF2Q03403 129 aa14.4□□□□□ -0.1
PRAME-204ENST00000403441 STXBP2Q15833 593 aa14.4□□□□□ -0.1
PRAME-204ENST00000403441 CCDC62Q6P9F0 684 aa14.4□□□□□ -0.1
PRAME-204ENST00000403441 SESTD1Q86VW0 696 aa14.4□□□□□ -0.1
PRAME-204ENST00000403441 ADGRF4Q8IZF3 695 aa14.4□□□□□ -0.1
PRAME-204ENST00000403441 SYTL5Q8TDW5 730 aaPredicted RBP14.4□□□□□ -0.1
PRAME-204ENST00000403441 RMDN3Q96TC7 470 aa14.4□□□□□ -0.1
PRAME-204ENST00000403441 CPVLQ9H3G5 476 aa14.4□□□□□ -0.1
PRAME-204ENST00000403441 PRRC2BQ5JSZ5 2229 aaKnown RBP14.39□□□□□ -0.11
PRAME-204ENST00000403441 REV3LO60673 3130 aa14.39□□□□□ -0.11
PRAME-204ENST00000403441 RFXAPO00287 272 aa14.39□□□□□ -0.11
PRAME-204ENST00000403441 PARNO95453 639 aaKnown RBP14.39□□□□□ -0.11
PRAME-204ENST00000403441 SELPP16109 830 aa14.39□□□□□ -0.11
PRAME-204ENST00000403441 TAP1Q03518 808 aa14.39□□□□□ -0.11
PRAME-204ENST00000403441 ARHGAP1Q07960 439 aa14.39□□□□□ -0.11
PRAME-204ENST00000403441 DGKDQ16760 1214 aa14.39□□□□□ -0.11
PRAME-204ENST00000403441 LY6KQ17RY6 165 aa14.39□□□□□ -0.11
PRAME-204ENST00000403441 ARHGEF16Q5VV41 709 aa14.39□□□□□ -0.11
PRAME-204ENST00000403441 GDF6Q6KF10 455 aaPredicted RBP14.39□□□□□ -0.11
PRAME-204ENST00000403441 LRRC8DQ7L1W4 858 aa14.39□□□□□ -0.11
PRAME-204ENST00000403441 CHST3Q7LGC8 479 aa14.39□□□□□ -0.11
PRAME-204ENST00000403441 C7orf31Q8N865 590 aa14.39□□□□□ -0.11
PRAME-204ENST00000403441 ZSCAN10Q96SZ4 725 aaPredicted RBP14.39□□□□□ -0.11
PRAME-204ENST00000403441 ZBED2Q9BTP6 218 aa14.39□□□□□ -0.11
PRAME-204ENST00000403441 KATNAL1Q9BW62 490 aa14.39□□□□□ -0.11
PRAME-204ENST00000403441 IL25Q9H293 177 aa14.39□□□□□ -0.11
PRAME-204ENST00000403441 DIAPH3Q9NSV4 1193 aa14.39□□□□□ -0.11
PRAME-204ENST00000403441 COG5Q9UP83 839 aa14.39□□□□□ -0.11
PRAME-204ENST00000403441 MRPL11Q9Y3B7 192 aaKnown RBP14.39□□□□□ -0.11
PRAME-204ENST00000403441 EPOPA6NHQ4 379 aa14.38□□□□□ -0.11
PRAME-204ENST00000403441 PARP1P09874 1014 aaKnown RBP14.38□□□□□ -0.11
PRAME-204ENST00000403441 BMP1P13497 986 aa14.38□□□□□ -0.11
PRAME-204ENST00000403441 KCNQ1P51787 676 aa14.38□□□□□ -0.11
PRAME-204ENST00000403441 WDR5P61964 334 aaKnown RBP14.38□□□□□ -0.11
PRAME-204ENST00000403441 QRICH1Q2TAL8 776 aa14.38□□□□□ -0.11
PRAME-204ENST00000403441 FBXO11Q86XK2 927 aa14.38□□□□□ -0.11
PRAME-204ENST00000403441 NECAB3Q96P71 396 aaPredicted RBP14.38□□□□□ -0.11
PRAME-204ENST00000403441 TAAR1Q96RJ0 339 aa14.38□□□□□ -0.11
PRAME-204ENST00000403441 UBAC1Q9BSL1 405 aa14.38□□□□□ -0.11
PRAME-204ENST00000403441 B4E1Z4 1266 aa14.37□□□□□ -0.11
PRAME-204ENST00000403441 EIF3JO75822 258 aaKnown RBP14.37□□□□□ -0.11
PRAME-204ENST00000403441 EIF2AK2P19525 551 aaKnown RBP14.37□□□□□ -0.11
PRAME-204ENST00000403441 RBL2Q08999 1139 aa14.37□□□□□ -0.11
PRAME-204ENST00000403441 IMMTQ16891 758 aaKnown RBP14.37□□□□□ -0.11
PRAME-204ENST00000403441 CNKSR3Q6P9H4 555 aa14.37□□□□□ -0.11
PRAME-204ENST00000403441 CWC27Q6UX04 472 aaKnown RBP14.37□□□□□ -0.11
PRAME-204ENST00000403441 ENAHQ8N8S7 591 aaPredicted RBP14.37□□□□□ -0.11
PRAME-204ENST00000403441 PPTC7Q8NI37 304 aa14.37□□□□□ -0.11
PRAME-204ENST00000403441 TBC1D5Q92609 795 aa14.37□□□□□ -0.11
PRAME-204ENST00000403441 ANKS1AQ92625 1134 aa14.37□□□□□ -0.11
PRAME-204ENST00000403441 KAT2BQ92831 832 aa14.37□□□□□ -0.11
PRAME-204ENST00000403441 EMID1Q96A84 441 aaPredicted RBP14.37□□□□□ -0.11
PRAME-204ENST00000403441 CTAGE1Q96RT6 745 aa14.37□□□□□ -0.11
PRAME-204ENST00000403441 DSCC1Q9BVC3 393 aa14.37□□□□□ -0.11
PRAME-204ENST00000403441 C1QTNF1Q9BXJ1 281 aa14.37□□□□□ -0.11
PRAME-204ENST00000403441 COL20A1Q9P218 1284 aa14.37□□□□□ -0.11
PRAME-204ENST00000403441 GTF2IRD1Q9UHL9 959 aa14.37□□□□□ -0.11
PRAME-204ENST00000403441 CTNNA3Q9UI47 895 aa14.37□□□□□ -0.11
PRAME-204ENST00000403441 MRVI1Q9Y6F6 885 aa14.37□□□□□ -0.11
PRAME-204ENST00000403441 KIAA1217Q5T5P2 1943 aa14.37□□□□□ -0.11
PRAME-204ENST00000403441 EFCAB14O75071 495 aa14.36□□□□□ -0.11
PRAME-204ENST00000403441 ARHGEF15O94989 841 aa14.36□□□□□ -0.11
PRAME-204ENST00000403441 CFBP00751 764 aa14.36□□□□□ -0.11
PRAME-204ENST00000403441 GRB10Q13322 594 aa14.36□□□□□ -0.11
PRAME-204ENST00000403441 LAMC2Q13753 1193 aa14.36□□□□□ -0.11
PRAME-204ENST00000403441 MFSD10Q14728 455 aa14.36□□□□□ -0.11
PRAME-204ENST00000403441 KRT40Q6A162 431 aa14.36□□□□□ -0.11
PRAME-204ENST00000403441 DHX37Q8IY37 1157 aaKnown RBP14.36□□□□□ -0.11
PRAME-204ENST00000403441 DHX38Q92620 1227 aaKnown RBP14.36□□□□□ -0.11
PRAME-204ENST00000403441 HLA-CQ95604 372 aa14.36□□□□□ -0.11
PRAME-204ENST00000403441 AMNQ9BXJ7 453 aa14.36□□□□□ -0.11
PRAME-204ENST00000403441 KRT23Q9C075 422 aa14.36□□□□□ -0.11
PRAME-204ENST00000403441 CNNM2Q9H8M5 875 aa14.36□□□□□ -0.11
PRAME-204ENST00000403441 VAT1LQ9HCJ6 419 aa14.36□□□□□ -0.11
PRAME-204ENST00000403441 PXMP2Q9NR77 195 aa14.36□□□□□ -0.11
PRAME-204ENST00000403441 TET1Q8NFU7 2136 aa14.36□□□□□ -0.11
PRAME-204ENST00000403441 COL4A4P53420 1690 aaPredicted RBP14.36□□□□□ -0.11
PRAME-204ENST00000403441 MYH6P13533 1939 aa14.35□□□□□ -0.11
PRAME-204ENST00000403441 TRIP12Q14669 1992 aaPredicted RBP14.35□□□□□ -0.11
PRAME-204ENST00000403441 ABHD14A-ACY1A0A1B0GW23 586 aa14.35□□□□□ -0.11
PRAME-204ENST00000403441 F2P00734 622 aa14.35□□□□□ -0.11
PRAME-204ENST00000403441 CXCL10P02778 98 aa14.35□□□□□ -0.11
PRAME-204ENST00000403441 NR3C2P08235 984 aa14.35□□□□□ -0.11
PRAME-204ENST00000403441 ZNF286BP0CG31 522 aa14.35□□□□□ -0.11
PRAME-204ENST00000403441 CKBP12277 381 aa14.35□□□□□ -0.11
PRAME-204ENST00000403441 CHMLP26374 656 aa14.35□□□□□ -0.11
PRAME-204ENST00000403441 PSEN2P49810 448 aa14.35□□□□□ -0.11
PRAME-204ENST00000403441 PTK7Q13308 1070 aa14.35□□□□□ -0.11
PRAME-204ENST00000403441 KIAA0753Q2KHM9 967 aa14.35□□□□□ -0.11
PRAME-204ENST00000403441 ALG1Q9BT22 464 aa14.35□□□□□ -0.11
PRAME-204ENST00000403441 JMJD4Q9H9V9 463 aa14.35□□□□□ -0.11
PRAME-204ENST00000403441 ZSWIM5Q9P217 1185 aa14.35□□□□□ -0.11
PRAME-204ENST00000403441 HDAC6Q9UBN7 1215 aa14.35□□□□□ -0.11
PRAME-204ENST00000403441 DDX41Q9UJV9 622 aaKnown RBP14.35□□□□□ -0.11
PRAME-204ENST00000403441 TCF20Q9UGU0 1960 aaKnown RBP14.34□□□□□ -0.11
PRAME-204ENST00000403441 HSD17B4P51659 736 aa14.34□□□□□ -0.11
PRAME-204ENST00000403441 DEFB103AP81534 67 aa14.34□□□□□ -0.11
PRAME-204ENST00000403441 IKBKEQ14164 716 aa14.34□□□□□ -0.11
PRAME-204ENST00000403441 IFIT1BQ5T764 474 aaKnown RBP14.34□□□□□ -0.11
PRAME-204ENST00000403441 KCNV1Q6PIU1 500 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms