RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 TCP11L1Q9NUJ3 509 aa22.05■■□□□ 1.12
CCDC47-202ENST00000403162 MCM9Q9NXL9 1143 aa22.05■■□□□ 1.12
CCDC47-202ENST00000403162 MTIF2P46199 727 aaKnown RBP22.05■■□□□ 1.12
CCDC47-202ENST00000403162 ITIH3Q06033 890 aa22.05■■□□□ 1.12
CCDC47-202ENST00000403162 PDE4DQ08499 809 aa22.05■■□□□ 1.12
CCDC47-202ENST00000403162 GRIK5Q16478 980 aa22.05■■□□□ 1.12
CCDC47-202ENST00000403162 SLC35G1Q2M3R5 365 aa22.05■■□□□ 1.12
CCDC47-202ENST00000403162 FOXR1Q6PIV2 292 aa22.05■■□□□ 1.12
CCDC47-202ENST00000403162 NOC4LQ9BVI4 516 aaKnown RBP22.05■■□□□ 1.12
CCDC47-202ENST00000403162 TRIM34Q9BYJ4 488 aa22.05■■□□□ 1.12
CCDC47-202ENST00000403162 ROBO3Q96MS0 1386 aa22.04■■□□□ 1.12
CCDC47-202ENST00000403162 SOCS7O14512 581 aa22.04■■□□□ 1.12
CCDC47-202ENST00000403162 C12orf60Q5U649 245 aa22.04■■□□□ 1.12
CCDC47-202ENST00000403162 TRIM58Q8NG06 486 aa22.04■■□□□ 1.12
CCDC47-202ENST00000403162 SELENOOQ9BVL4 669 aa22.04■■□□□ 1.12
CCDC47-202ENST00000403162 JRKLQ9Y4A0 524 aa22.04■■□□□ 1.12
CCDC47-202ENST00000403162 DUSP10Q9Y6W6 482 aa22.04■■□□□ 1.12
CCDC47-202ENST00000403162 ZNF185O15231 689 aa22.04■■□□□ 1.12
CCDC47-202ENST00000403162 HEATR3Q7Z4Q2 680 aa22.04■■□□□ 1.12
CCDC47-202ENST00000403162 MMGT1Q8N4V1 131 aa22.04■■□□□ 1.12
CCDC47-202ENST00000403162 CRACR2AQ9BSW2 395 aa22.04■■□□□ 1.12
CCDC47-202ENST00000403162 JADE2Q9NQC1 790 aa22.04■■□□□ 1.12
CCDC47-202ENST00000403162 SNX12Q9UMY4 172 aa22.04■■□□□ 1.12
CCDC47-202ENST00000403162 NFKBIEO00221 500 aa22.03■■□□□ 1.12
CCDC47-202ENST00000403162 CYTH3O43739 400 aa22.03■■□□□ 1.12
CCDC47-202ENST00000403162 OR52Z1P0C646 297 aa22.03■■□□□ 1.12
CCDC47-202ENST00000403162 USP17L8P0C7I0 530 aa22.03■■□□□ 1.12
CCDC47-202ENST00000403162 MYBL2P10244 700 aa22.03■■□□□ 1.12
CCDC47-202ENST00000403162 STK4Q13043 487 aa22.03■■□□□ 1.12
CCDC47-202ENST00000403162 SPA17Q15506 151 aa22.03■■□□□ 1.12
CCDC47-202ENST00000403162 FKBP15Q5T1M5 1219 aa22.03■■□□□ 1.12
CCDC47-202ENST00000403162 CCDC70Q6NSX1 233 aa22.03■■□□□ 1.12
CCDC47-202ENST00000403162 PCMTD1Q96MG8 357 aaPredicted RBP22.03■■□□□ 1.12
CCDC47-202ENST00000403162 VPS33BQ9H267 617 aa22.03■■□□□ 1.12
CCDC47-202ENST00000403162 MACROD2A1Z1Q3 448 aa22.02■■□□□ 1.12
CCDC47-202ENST00000403162 ZNF263O14978 683 aa22.02■■□□□ 1.12
CCDC47-202ENST00000403162 PRLRP16471 622 aa22.02■■□□□ 1.12
CCDC47-202ENST00000403162 CYP27A1Q02318 531 aa22.02■■□□□ 1.12
CCDC47-202ENST00000403162 CCDC42Q96M95 316 aa22.02■■□□□ 1.12
CCDC47-202ENST00000403162 MXD3Q9BW11 206 aa22.02■■□□□ 1.12
CCDC47-202ENST00000403162 PLAGL2Q9UPG8 496 aa22.02■■□□□ 1.12
CCDC47-202ENST00000403162 USO1O60763 962 aaKnown RBP22.02■■□□□ 1.12
CCDC47-202ENST00000403162 PPFIA4O75335 1185 aa22.02■■□□□ 1.12
CCDC47-202ENST00000403162 GGCXP38435 758 aa22.02■■□□□ 1.12
CCDC47-202ENST00000403162 ASIC1P78348 528 aa22.02■■□□□ 1.12
CCDC47-202ENST00000403162 AMPD3Q01432 767 aa22.02■■□□□ 1.12
CCDC47-202ENST00000403162 AMOTL1Q8IY63 956 aa22.02■■□□□ 1.12
CCDC47-202ENST00000403162 AENQ8WTP8 325 aaKnown RBP22.02■■□□□ 1.12
CCDC47-202ENST00000403162 LZTS2Q9BRK4 669 aa22.02■■□□□ 1.12
CCDC47-202ENST00000403162 FAM184BQ9ULE4 1060 aa22.02■■□□□ 1.12
CCDC47-202ENST00000403162 FER1L6Q2WGJ9 1857 aa22.02■■□□□ 1.11
CCDC47-202ENST00000403162 AGPSO00116 658 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 TACC1O75410 805 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 ZMYND10O75800 440 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 C2orf54Q08AI8 447 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 CNNM4Q6P4Q7 775 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 KRT25Q7Z3Z0 450 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 CREG2Q8IUH2 290 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 ZMYND12Q9H0C1 365 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 SH2D4AQ9H788 454 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 LRWD1Q9UFC0 647 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 USP17L3A6NCW0 530 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 USP17L4A6NCW7 530 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 PALM3A6NDB9 673 aaPredicted RBP22.01■■□□□ 1.11
CCDC47-202ENST00000403162 YDJCA8MPS7 323 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 SHOX2O60902 331 aaPredicted RBP22.01■■□□□ 1.11
CCDC47-202ENST00000403162 LCA5LO95447 670 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 USP17L1Q7RTZ2 530 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 NIM1KQ8IY84 436 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 CERS5Q8N5B7 392 aa22.01■■□□□ 1.11
CCDC47-202ENST00000403162 FCER1AP12319 257 aa22■■□□□ 1.11
CCDC47-202ENST00000403162 GSTO1P78417 241 aa22■■□□□ 1.11
CCDC47-202ENST00000403162 CCDC96Q2M329 555 aa22■■□□□ 1.11
CCDC47-202ENST00000403162 STRIP1Q5VSL9 837 aa22■■□□□ 1.11
CCDC47-202ENST00000403162 CENPPQ6IPU0 288 aa22■■□□□ 1.11
CCDC47-202ENST00000403162 EEF2KMTQ96G04 330 aa22■■□□□ 1.11
CCDC47-202ENST00000403162 ARFGEF1Q9Y6D6 1849 aa22■■□□□ 1.11
CCDC47-202ENST00000403162 RASSF7Q02833 373 aa21.99■■□□□ 1.11
CCDC47-202ENST00000403162 GSPT2Q8IYD1 628 aaKnown RBP21.99■■□□□ 1.11
CCDC47-202ENST00000403162 IFIH1Q9BYX4 1025 aaKnown RBP21.99■■□□□ 1.11
CCDC47-202ENST00000403162 SIK3Q9Y2K2 1263 aa21.99■■□□□ 1.11
CCDC47-202ENST00000403162 ABCB11O95342 1321 aa21.99■■□□□ 1.11
CCDC47-202ENST00000403162 COL4A5P29400 1685 aa21.99■■□□□ 1.11
CCDC47-202ENST00000403162 F8W031 263 aaPredicted RBP21.99■■□□□ 1.11
CCDC47-202ENST00000403162 NONOQ15233 471 aaKnown RBP eCLIP21.99■■□□□ 1.11
CCDC47-202ENST00000403162 DIXDC1Q155Q3 683 aa21.99■■□□□ 1.11
CCDC47-202ENST00000403162 KIAA0895Q8NCT3 520 aa21.99■■□□□ 1.11
CCDC47-202ENST00000403162 RIN2Q8WYP3 895 aaPredicted RBP21.99■■□□□ 1.11
CCDC47-202ENST00000403162 SEMA6BQ9H3T3 888 aa21.99■■□□□ 1.11
CCDC47-202ENST00000403162 ARHGAP20Q9P2F6 1191 aa21.99■■□□□ 1.11
CCDC47-202ENST00000403162 RSPH14Q9UHP6 348 aa21.99■■□□□ 1.11
CCDC47-202ENST00000403162 PCDHA13Q9Y5I0 950 aa21.99■■□□□ 1.11
CCDC47-202ENST00000403162 SCN9AQ15858 1988 aa21.99■■□□□ 1.11
CCDC47-202ENST00000403162 MAGEA9P43362 315 aa21.98■■□□□ 1.11
CCDC47-202ENST00000403162 ORC2Q13416 577 aaPredicted RBP21.98■■□□□ 1.11
CCDC47-202ENST00000403162 DACT2Q5SW24 774 aa21.98■■□□□ 1.11
CCDC47-202ENST00000403162 KRT26Q7Z3Y9 468 aa21.98■■□□□ 1.11
CCDC47-202ENST00000403162 DYNLL2Q96FJ2 89 aa21.98■■□□□ 1.11
CCDC47-202ENST00000403162 SPZ1Q9BXG8 430 aa21.98■■□□□ 1.11
CCDC47-202ENST00000403162 MKNK2Q9HBH9 465 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms