RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.2■□□□□ 0.5
HMGA1-204ENST00000401473 RTEL1Q9NZ71 1219 aa18.2■□□□□ 0.5
HMGA1-204ENST00000401473 LOC102724159A0A0B4J2E5 919 aa18.19■□□□□ 0.5
HMGA1-204ENST00000401473 CCDC194A0A1B0GVG4 234 aa18.19■□□□□ 0.5
HMGA1-204ENST00000401473 CACNB2Q08289 660 aaPredicted RBP18.19■□□□□ 0.5
HMGA1-204ENST00000401473 PWP2Q15269 919 aaKnown RBP18.19■□□□□ 0.5
HMGA1-204ENST00000401473 STXBP2Q15833 593 aa18.19■□□□□ 0.5
HMGA1-204ENST00000401473 KRT25Q7Z3Z0 450 aa18.19■□□□□ 0.5
HMGA1-204ENST00000401473 NOSTRINQ8IVI9 506 aa18.19■□□□□ 0.5
HMGA1-204ENST00000401473 KIAA0100Q14667 2235 aaKnown RBP18.19■□□□□ 0.5
HMGA1-204ENST00000401473 WNT7AO00755 349 aa18.18■□□□□ 0.5
HMGA1-204ENST00000401473 MYCP01106 439 aaPredicted RBP18.18■□□□□ 0.5
HMGA1-204ENST00000401473 HMGCRP04035 888 aa18.18■□□□□ 0.5
HMGA1-204ENST00000401473 INHAP05111 366 aa18.18■□□□□ 0.5
HMGA1-204ENST00000401473 PDE4DQ08499 809 aa18.18■□□□□ 0.5
HMGA1-204ENST00000401473 NONOQ15233 471 aaKnown RBP eCLIP18.18■□□□□ 0.56e-7■□□□□ 10
HMGA1-204ENST00000401473 TRPV1Q8NER1 839 aa18.18■□□□□ 0.5
HMGA1-204ENST00000401473 PDGFCQ9NRA1 345 aa18.18■□□□□ 0.5
HMGA1-204ENST00000401473 ZDHHC9Q9Y397 364 aa18.18■□□□□ 0.5
HMGA1-204ENST00000401473 FAM86B1E9PN63 330 aa18.18■□□□□ 0.5
HMGA1-204ENST00000401473 EIF3JO75822 258 aaKnown RBP18.18■□□□□ 0.5
HMGA1-204ENST00000401473 CYP3A4P08684 503 aa18.18■□□□□ 0.5
HMGA1-204ENST00000401473 FAM86B2P0C5J1 330 aa18.18■□□□□ 0.5
HMGA1-204ENST00000401473 ITGB5P18084 799 aa18.18■□□□□ 0.5
HMGA1-204ENST00000401473 TMEM63BQ5T3F8 832 aa18.18■□□□□ 0.5
HMGA1-204ENST00000401473 MAP3K21Q5TCX8 1036 aa18.18■□□□□ 0.5
HMGA1-204ENST00000401473 TAPT1Q6NXT6 567 aa18.18■□□□□ 0.5
HMGA1-204ENST00000401473 FBXO16Q8IX29 292 aaPredicted RBP18.18■□□□□ 0.5
HMGA1-204ENST00000401473 TRMT44Q8IYL2 757 aaKnown RBP18.18■□□□□ 0.5
HMGA1-204ENST00000401473 ARMC5Q96C12 935 aa18.18■□□□□ 0.5
HMGA1-204ENST00000401473 ABHD16BQ9H3Z7 469 aa18.18■□□□□ 0.5
HMGA1-204ENST00000401473 ZNF865P0CJ78 1059 aaPredicted RBP18.17■□□□□ 0.5
HMGA1-204ENST00000401473 CCND2P30279 289 aa18.17■□□□□ 0.5
HMGA1-204ENST00000401473 USP11P51784 963 aa18.17■□□□□ 0.5
HMGA1-204ENST00000401473 ACVR2BQ13705 512 aa18.17■□□□□ 0.5
HMGA1-204ENST00000401473 MTFR1Q15390 333 aa18.17■□□□□ 0.5
HMGA1-204ENST00000401473 FOXD4L5Q5VV16 416 aaPredicted RBP18.17■□□□□ 0.5
HMGA1-204ENST00000401473 MFSD14CQ5VZR4 134 aa18.17■□□□□ 0.5
HMGA1-204ENST00000401473 FOXD4L4Q8WXT5 416 aaPredicted RBP18.17■□□□□ 0.5
HMGA1-204ENST00000401473 ZNF333Q96JL9 665 aa18.17■□□□□ 0.5
HMGA1-204ENST00000401473 IPO9Q96P70 1041 aaKnown RBP18.17■□□□□ 0.5
HMGA1-204ENST00000401473 WDR11Q9BZH6 1224 aa18.17■□□□□ 0.5
HMGA1-204ENST00000401473 LRRC37A2A6NM11 1700 aa18.17■□□□□ 0.5
HMGA1-204ENST00000401473 PRKAR2AP13861 404 aaKnown RBP18.16■□□□□ 0.5
HMGA1-204ENST00000401473 TOB1P50616 345 aaPredicted RBP18.16■□□□□ 0.5
HMGA1-204ENST00000401473 GNL2Q13823 731 aaKnown RBP18.16■□□□□ 0.5
HMGA1-204ENST00000401473 INPP4AQ96PE3 977 aaPredicted RBP18.16■□□□□ 0.5
HMGA1-204ENST00000401473 EHMT1Q9H9B1 1298 aa18.16■□□□□ 0.5
HMGA1-204ENST00000401473 DAXXQ9UER7 740 aaPredicted RBP18.16■□□□□ 0.5
HMGA1-204ENST00000401473 B4DLN1 442 aa18.16■□□□□ 0.5
HMGA1-204ENST00000401473 CYBAP13498 195 aa18.16■□□□□ 0.5
HMGA1-204ENST00000401473 CIITAP33076 1130 aa18.16■□□□□ 0.5
HMGA1-204ENST00000401473 LETM2Q2VYF4 491 aa18.16■□□□□ 0.5
HMGA1-204ENST00000401473 XRRA1Q6P2D8 792 aa18.16■□□□□ 0.5
HMGA1-204ENST00000401473 FAM173BQ6P4H8 233 aa18.16■□□□□ 0.5
HMGA1-204ENST00000401473 SEPT14Q6ZU15 432 aa18.16■□□□□ 0.5
HMGA1-204ENST00000401473 CNPY2Q9Y2B0 182 aa18.16■□□□□ 0.5
HMGA1-204ENST00000401473 UBIAD1Q9Y5Z9 338 aa18.16■□□□□ 0.5
HMGA1-204ENST00000401473 IGLV3-22A0A075B6J6 115 aa18.15■□□□□ 0.5
HMGA1-204ENST00000401473 MEIS1O00470 390 aa18.15■□□□□ 0.5
HMGA1-204ENST00000401473 TDP2O95551 362 aa18.15■□□□□ 0.5
HMGA1-204ENST00000401473 RESTQ13127 1097 aa18.15■□□□□ 0.5
HMGA1-204ENST00000401473 SEMA3FQ13275 785 aa18.15■□□□□ 0.5
HMGA1-204ENST00000401473 CEP55Q53EZ4 464 aa18.15■□□□□ 0.5
HMGA1-204ENST00000401473 NEK8Q86SG6 692 aa18.15■□□□□ 0.5
HMGA1-204ENST00000401473 MPHOSPH6Q99547 160 aaKnown RBP18.15■□□□□ 0.5
HMGA1-204ENST00000401473 MXRA8Q9BRK3 442 aa18.15■□□□□ 0.5
HMGA1-204ENST00000401473 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.14■□□□□ 0.49
HMGA1-204ENST00000401473 ADCY6O43306 1168 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 ARIH2O95376 493 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 ZSCAN22P10073 491 aaPredicted RBP18.14■□□□□ 0.49
HMGA1-204ENST00000401473 PTGS1P23219 599 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 CCND3P30281 292 aaPredicted RBP18.14■□□□□ 0.49
HMGA1-204ENST00000401473 ADCYAP1R1P41586 468 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 NBR1Q14596 966 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 CCDC144BQ3MJ40 725 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 LENG9Q96B70 501 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 UNC93B1Q9H1C4 597 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 VTA1Q9NP79 307 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 ZHX1Q9UKY1 873 aaPredicted RBP18.14■□□□□ 0.49
HMGA1-204ENST00000401473 CYP3A7-CYP3A51PA0A087WV96 503 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 STAM2O75886 525 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 BRD1O95696 1058 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 ARP10275 920 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 PDIA4P13667 645 aaKnown RBP18.14■□□□□ 0.49
HMGA1-204ENST00000401473 ATP2B1P20020 1258 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 CYP3A7P24462 503 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 SP2Q02086 613 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 TNS4Q8IZW8 715 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 BCAS3Q9H6U6 928 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 JADE2Q9NQC1 790 aa18.14■□□□□ 0.49
HMGA1-204ENST00000401473 RBM47A0AV96 593 aaKnown RBP18.13■□□□□ 0.49
HMGA1-204ENST00000401473 CCNT1O60563 726 aaKnown RBP18.13■□□□□ 0.49
HMGA1-204ENST00000401473 ATP9AO75110 1047 aa18.13■□□□□ 0.49
HMGA1-204ENST00000401473 ZNF76P36508 570 aa18.13■□□□□ 0.49
HMGA1-204ENST00000401473 PRR16Q569H4 304 aa18.13■□□□□ 0.49
HMGA1-204ENST00000401473 PPP4R3AQ6IN85 833 aa18.13■□□□□ 0.49
HMGA1-204ENST00000401473 CCDC62Q6P9F0 684 aa18.13■□□□□ 0.49
HMGA1-204ENST00000401473 ABHD8Q96I13 439 aa18.13■□□□□ 0.49
HMGA1-204ENST00000401473 UIMC1Q96RL1 719 aa18.13■□□□□ 0.49
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