RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 RRP12Q5JTH9 1297 aaKnown RBP4.45□□□□□ -1.7
CLHC1-201ENST00000401408 TRIM68Q6AZZ1 485 aa4.45□□□□□ -1.7
CLHC1-201ENST00000401408 ITPRIPL1Q6GPH6 555 aa4.45□□□□□ -1.7
CLHC1-201ENST00000401408 LLGL2Q6P1M3 1020 aa4.45□□□□□ -1.7
CLHC1-201ENST00000401408 C4orf50Q6ZRC1 276 aa4.45□□□□□ -1.7
CLHC1-201ENST00000401408 LHFPL2Q6ZUX7 228 aa4.45□□□□□ -1.7
CLHC1-201ENST00000401408 MYLK4Q86YV6 388 aaPredicted RBP4.45□□□□□ -1.7
CLHC1-201ENST00000401408 USP6NLQ92738 828 aa4.45□□□□□ -1.7
CLHC1-201ENST00000401408 ACSBG1Q96GR2 724 aa4.45□□□□□ -1.7
CLHC1-201ENST00000401408 ABHD8Q96I13 439 aa4.45□□□□□ -1.7
CLHC1-201ENST00000401408 KATNAL1Q9BW62 490 aa4.45□□□□□ -1.7
CLHC1-201ENST00000401408 FANCFQ9NPI8 374 aa4.45□□□□□ -1.7
CLHC1-201ENST00000401408 HCN4Q9Y3Q4 1203 aa4.45□□□□□ -1.7
CLHC1-201ENST00000401408 KDM6AO15550 1401 aaPredicted RBP4.45□□□□□ -1.7
CLHC1-201ENST00000401408 FRMPD2Q68DX3 1309 aaPredicted RBP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 A0A0B4J203 849 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 C2orf81A6NN90 581 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 GSG1L2A8MUP6 293 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 PER1O15534 1290 aaPredicted RBP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 CPEP16870 476 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 RPS6KB1P23443 525 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 CHKAP35790 457 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 ADCY1Q08828 1119 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 MAP7D1Q3KQU3 841 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 C8orf34Q49A92 452 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 TNNI3KQ59H18 835 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 INTS11Q5TA45 600 aaKnown RBP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 KIAA0319Q5VV43 1072 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 FIP1L1Q6UN15 594 aaKnown RBP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 SPATC1Q76KD6 591 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 NLRP14Q86W24 1093 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 AMIGO3Q86WK7 504 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 IQCA1Q86XH1 822 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 SLC44A2Q8IWA5 706 aaPredicted RBP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 SPATA5Q8NB90 893 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 CCDC191Q8NCU4 936 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 SPATA18Q8TC71 538 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 BRSK1Q8TDC3 778 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 NSUN6Q8TEA1 469 aaKnown RBP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 ANKRD49Q8WVL7 239 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 BAP1Q92560 729 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 NLRP3Q96P20 1036 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 HAUS7Q99871 368 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 PDCL3Q9H2J4 239 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 MAN1C1Q9NR34 630 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 ZNHIT6Q9NWK9 470 aaKnown RBP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 IRAK4Q9NWZ3 460 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 PDP2Q9P2J9 529 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 NFKBIL1Q9UBC1 381 aaPredicted RBP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 PPARGC1AQ9UBK2 798 aaKnown RBP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 RCAN3Q9UKA8 241 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 TRHDEQ9UKU6 1024 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 C4BP0C0L5 1744 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 THSD7BQ9C0I4 1608 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 KRT13P13646 458 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 ATP6V1B1P15313 513 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 XPAP23025 273 aaPredicted RBP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 CCNCP24863 283 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 AK2P54819 239 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 CSE1LP55060 971 aaKnown RBP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 KCNQ4P56696 695 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 NLRP12P59046 1061 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 GTF2IP78347 998 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 STRN3Q13033 797 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 PABPC4Q13310 644 aaKnown RBP eCLIP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 GALEQ14376 348 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 GBX1Q14549 363 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 CBX2Q14781 532 aaPredicted RBP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 ARHGAP29Q52LW3 1261 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 SLC45A4Q5BKX6 768 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 HECTD3Q5T447 861 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 C6orf118Q5T5N4 469 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 RETSATQ6NUM9 610 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 ABRAXAS1Q6UWZ7 409 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 SH3RF1Q7Z6J0 888 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 PHTF2Q8N3S3 785 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 KLHL23Q8NBE8 558 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 SMC1BQ8NDV3 1235 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 TDRD7Q8NHU6 1098 aaKnown RBP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 BICD2Q8TD16 824 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 HDAC2Q92769 488 aaKnown RBP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 TTC17Q96AE7 1141 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 GCC1Q96CN9 775 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 MYD88Q99836 296 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 SLC26A6Q9BXS9 759 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 ELAC1Q9H777 363 aaKnown RBP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 POGKQ9P215 609 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 FNIP2Q9P278 1114 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 DDX20Q9UHI6 824 aaKnown RBP4.44□□□□□ -1.7
CLHC1-201ENST00000401408 ZNF112Q9UJU3 913 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 MAPRE3Q9UPY8 281 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 GPR52Q9Y2T5 361 aa4.44□□□□□ -1.7
CLHC1-201ENST00000401408 ANKRD36BQ8N2N9 1353 aa4.43□□□□□ -1.7
CLHC1-201ENST00000401408 GABRDO14764 452 aa4.43□□□□□ -1.7
CLHC1-201ENST00000401408 DDX3YO15523 660 aaKnown RBP4.43□□□□□ -1.7
CLHC1-201ENST00000401408 TLR5O60602 858 aa4.43□□□□□ -1.7
CLHC1-201ENST00000401408 HSD3B1P14060 373 aa4.43□□□□□ -1.7
CLHC1-201ENST00000401408 SSRP1Q08945 709 aaKnown RBP4.43□□□□□ -1.7
CLHC1-201ENST00000401408 GALNT13Q8IUC8 556 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms