RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 NEUROG2Q9H2A3 272 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 TMEM247A6NEH6 219 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 SCG2P13521 617 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 EHHADHQ08426 723 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 KRT80Q6KB66 452 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 KLC3Q6P597 504 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 EXOC8Q8IYI6 725 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 CNOT6LQ96LI5 555 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 PLEKHG3A1L390 1219 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 WDR64B1ANS9 1081 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 TBCCQ15814 346 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 SPATA1Q5VX52 437 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 OTUD7AQ8TE49 926 aaPredicted RBP13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 GPKOWQ92917 476 aaPredicted RBP eCLIP13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 ZNF653Q96CK0 615 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 KIFC3Q9BVG8 833 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 RPSAP08865 295 aaKnown RBP13.33□□□□□ -0.27
CACNA1C-219ENST00000399649 TRIM67Q6ZTA4 783 aa13.33□□□□□ -0.27
CACNA1C-219ENST00000399649 RPAINQ86UA6 219 aa13.33□□□□□ -0.27
CACNA1C-219ENST00000399649 FAM186BQ8IYM0 893 aa13.33□□□□□ -0.27
CACNA1C-219ENST00000399649 GDAP1Q8TB36 358 aa13.33□□□□□ -0.27
CACNA1C-219ENST00000399649 ZC3H15Q8WU90 426 aaKnown RBP13.33□□□□□ -0.27
CACNA1C-219ENST00000399649 ABTB1Q969K4 478 aaPredicted RBP13.33□□□□□ -0.27
CACNA1C-219ENST00000399649 ACCSQ96QU6 501 aa13.33□□□□□ -0.27
CACNA1C-219ENST00000399649 PRKAG2Q9UGJ0 569 aa13.33□□□□□ -0.27
CACNA1C-219ENST00000399649 ZSCAN20P17040 1043 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 PPARGP37231 505 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 ICA1Q05084 483 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 GLE1Q53GS7 698 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 TRMT10CQ7L0Y3 403 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 DPP9Q86TI2 863 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 TTC25Q96NG3 672 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 JPH2Q9BR39 696 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 SCINQ9Y6U3 715 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 SOS2Q07890 1332 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 H3BRJ5 948 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 ECEL1O95672 775 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 IFNAR2P48551 515 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 TTLL7Q6ZT98 887 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 TRIM59Q8IWR1 403 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 BCL2L12Q9HB09 334 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 TXLNGQ9NUQ3 528 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 GAP43P17677 238 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 NCF2P19878 526 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 ABCD1P33897 745 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 EPHB1P54762 984 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 TMED1Q13445 227 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 ANGPTL8Q6UXH0 198 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 PIP4K2CQ8TBX8 421 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 MYCBPQ99417 103 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 ZMYM3Q14202 1370 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 USP17L12C9JPN9 530 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 USP17L21D6R901 530 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 HNRNPDLO14979 420 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 MT-ND3P03897 115 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 A1BGP04217 495 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 CCND2P30279 289 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 FAM26FQ5R3K3 315 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 IFNL3Q8IZI9 196 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 SYMPKQ92797 1274 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 ALKBH8Q96BT7 664 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 MID2Q9UJV3 735 aa13.33□□□□□ -0.28
CACNA1C-219ENST00000399649 ARHGEF37A1IGU5 675 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 KLRF2D3W0D1 207 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 CCT5P48643 541 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 COPB1P53618 953 aaKnown RBP13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 ARPP19P56211 112 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 ODR4Q5SWX8 454 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 PHACTR3Q96KR7 559 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 KMT5AQ9NQR1 393 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 KAT6BQ8WYB5 2073 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 AFPP02771 609 aaKnown RBP13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 PNMA1Q8ND90 353 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 SCOCQ9UIL1 159 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 JRKLQ9Y4A0 524 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 IFNA8P32881 189 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 ME3Q16798 604 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 LRRC8AQ8IWT6 810 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 GANCQ8TET4 914 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 ZNF577Q9BSK1 485 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 EPN1Q9Y6I3 576 aaPredicted RBP13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 BTDP43251 543 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 DYNLT1P63172 113 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 KCTD16Q68DU8 428 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 FAM149B1Q96BN6 582 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 USP19O94966 1318 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 GOLGA8HP0CJ92 632 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 SULF1Q8IWU6 871 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 GJA10Q969M2 543 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 TEX12Q9BXU0 123 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 PDE11AQ9HCR9 933 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 LMBRD1Q9NUN5 540 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 CAPN11Q9UMQ6 739 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 BCS1LQ9Y276 419 aa13.32□□□□□ -0.28
CACNA1C-219ENST00000399649 ATP5JP18859 108 aa13.31□□□□□ -0.28
CACNA1C-219ENST00000399649 BASP1P80723 227 aaKnown RBP13.31□□□□□ -0.28
CACNA1C-219ENST00000399649 IFT88Q13099 833 aa13.31□□□□□ -0.28
CACNA1C-219ENST00000399649 KIAA1841Q6NSI8 718 aa13.31□□□□□ -0.28
CACNA1C-219ENST00000399649 NACC1Q96RE7 527 aa13.31□□□□□ -0.28
CACNA1C-219ENST00000399649 DAAM1Q9Y4D1 1078 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms