RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ZMYM5Q9UJ78 669 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 ZBTB21Q9ULJ3 1066 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 RBM8AQ9Y5S9 174 aaKnown RBP7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 PYGLP06737 847 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 TATP17735 454 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 GPTP24298 496 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 CABP4P57796 275 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 SLMAPQ14BN4 828 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 BRICD5Q6PL45 260 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 CCDC81Q6ZN84 652 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 FASTKD5Q7L8L6 764 aaKnown RBP7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 FAM186BQ8IYM0 893 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 AGAP3Q96P47 875 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 EPB41L4AQ9HCS5 686 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 CEMIPQ8WUJ3 1361 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 GPR39O43194 453 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 TIPRLO75663 272 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 IL33O95760 270 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 HSPA4P34932 840 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 GUCY1B3Q02153 619 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 MINDY4Q4G0A6 757 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 LMBR1LQ6UX01 489 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 HAUS7Q99871 368 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 PIH1D1Q9NWS0 290 aaKnown RBP7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 HERC5Q9UII4 1024 aaKnown RBP7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 FKBPLQ9UIM3 349 aa7.01□□□□□ -1.29
TRAPPC13-202ENST00000399438 FAM25EA8MYX2 175 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 RTCAO00442 366 aaKnown RBP7□□□□□ -1.29
TRAPPC13-202ENST00000399438 EIF1AYO14602 144 aaKnown RBP7□□□□□ -1.29
TRAPPC13-202ENST00000399438 TLR5O60602 858 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 JAK2O60674 1132 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 PRKAR2AP13861 404 aaKnown RBP7□□□□□ -1.29
TRAPPC13-202ENST00000399438 SYT1P21579 422 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 GJB2P29033 226 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 LARP7Q4G0J3 582 aaKnown RBP eCLIP7□□□□□ -1.29
TRAPPC13-202ENST00000399438 NUGGCQ68CJ6 796 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 JAKMIP2Q96AA8 810 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 PUS3Q9BZE2 481 aaKnown RBP7□□□□□ -1.29
TRAPPC13-202ENST00000399438 UTP6Q9NYH9 597 aaKnown RBP7□□□□□ -1.29
TRAPPC13-202ENST00000399438 DBNLQ9UJU6 430 aaKnown RBP7□□□□□ -1.29
TRAPPC13-202ENST00000399438 RAD50Q92878 1312 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 WNK3Q9BYP7 1800 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 NEURL1BA8MQ27 555 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 M0R3H8 397 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 SNAP23O00161 211 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 MAP3K6O95382 1288 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 ADAMTS2O95450 1211 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 RCAN1P53805 252 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 HAND2P61296 217 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 ST3GAL1Q11201 340 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 ME3Q16798 604 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 CARNMT1Q8N4J0 409 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 ERCC4Q92889 916 aaPredicted RBP7□□□□□ -1.29
TRAPPC13-202ENST00000399438 SLC52A2Q9HAB3 445 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 NKIRAS2Q9NYR9 191 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 FAM198AQ9UFP1 575 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 WDR17Q8IZU2 1322 aa7□□□□□ -1.29
TRAPPC13-202ENST00000399438 AREL1O15033 823 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 GLRX3O76003 335 aaKnown RBP6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 GCKRQ14397 625 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 LRRC24Q50LG9 513 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 IRGCQ6NXR0 463 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 SMIM5Q71RC9 77 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 STAG2Q8N3U4 1231 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 GABPB2Q8TAK5 448 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 CCDC94Q9BW85 323 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 FTOQ9C0B1 505 aaKnown RBP eCLIP6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 ELAC1Q9H777 363 aaKnown RBP6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 LUC7LQ9NQ29 371 aaKnown RBP6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 POLIQ9UNA4 740 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 BHMG1C9JSJ3 638 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 C6orf229H3BNL8 230 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 RFPL3O75679 317 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 XPAP23025 273 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 GCGRP47871 477 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 COL9A2Q14055 689 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 SLC45A4Q5BKX6 768 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 TMEM67Q5HYA8 995 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 GPR158Q5T848 1215 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 RETSATQ6NUM9 610 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 CDC37L1Q7L3B6 337 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 PHC3Q8NDX5 983 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 LINS1Q8NG48 757 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 NSUN6Q8TEA1 469 aaKnown RBP6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 CEP95Q96GE4 821 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 BARD1Q99728 777 aaKnown RBP6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 BTG4Q9NY30 223 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 TSR3Q9UJK0 312 aaKnown RBP6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 SLC4A7Q9Y6M7 1214 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 PLEKHG2Q9H7P9 1386 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 NBPF26B4DH59 902 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 NCAM2O15394 837 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 GJB6O95452 261 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 BTF3P20290 206 aaKnown RBP6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 GARTP22102 1010 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 PLIN5Q00G26 463 aa6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 SHROOM1Q2M3G4 852 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 SKOR2Q2VWA4 1001 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC13-202ENST00000399438 AMOTQ4VCS5 1084 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms