RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 USP17L11C9JVI0 530 aa16.15■□□□□ 0.18
CCDC144A-205ENST00000399264 USP17L18D6R9N7 530 aa16.15■□□□□ 0.18
CCDC144A-205ENST00000399264 USP17L22D6RA61 530 aa16.15■□□□□ 0.18
CCDC144A-205ENST00000399264 USP17L17D6RBQ6 530 aa16.15■□□□□ 0.18
CCDC144A-205ENST00000399264 USP17L19D6RCP7 530 aa16.15■□□□□ 0.18
CCDC144A-205ENST00000399264 USP17L20D6RJB6 530 aa16.15■□□□□ 0.18
CCDC144A-205ENST00000399264 TNNT3P45378 269 aaPredicted RBP16.15■□□□□ 0.18
CCDC144A-205ENST00000399264 CACNB3P54284 484 aa16.15■□□□□ 0.18
CCDC144A-205ENST00000399264 USP17L24Q0WX57 530 aa16.15■□□□□ 0.18
CCDC144A-205ENST00000399264 USP17L6PQ6QN14 398 aa16.15■□□□□ 0.18
CCDC144A-205ENST00000399264 LRRC55Q6ZSA7 311 aa16.15■□□□□ 0.18
CCDC144A-205ENST00000399264 UNC13DQ70J99 1090 aa16.15■□□□□ 0.18
CCDC144A-205ENST00000399264 RAD54LQ92698 747 aa16.15■□□□□ 0.18
CCDC144A-205ENST00000399264 PLEKHA4Q9H4M7 779 aa16.15■□□□□ 0.18
CCDC144A-205ENST00000399264 PLAGL2Q9UPG8 496 aa16.15■□□□□ 0.18
CCDC144A-205ENST00000399264 SNAP25P60880 206 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 GFPT1Q06210 699 aaPredicted RBP16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 KIF5AQ12840 1032 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 ENOX2Q16206 610 aaKnown RBP16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 DOK7Q18PE1 504 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 NFRKBQ6P4R8 1299 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 NELFCDQ8IXH7 590 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 NUP58Q9BVL2 599 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 IFIH1Q9BYX4 1025 aaKnown RBP16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 USP21Q9UK80 565 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 PCDHA13Q9Y5I0 950 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 ZNF831Q5JPB2 1677 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 E9PMD0 336 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 MPHOSPH10O00566 681 aaKnown RBP16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 IPO7O95373 1038 aaKnown RBP16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 KIF11P52732 1056 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 VAV2P52735 878 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 GABPAQ06546 454 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 CRY2Q49AN0 593 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 SECISBP2LQ93073 1101 aaKnown RBP16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 TANGO6Q9C0B7 1094 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 MAGEF1Q9HAY2 307 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 KCNQ5Q9NR82 932 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 GAKO14976 1311 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 ATP2B4P23634 1241 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 NOVP48745 357 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 FXR2P51116 673 aaKnown RBP eCLIP16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 DNA2P51530 1060 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 SLC7A5Q01650 507 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 DDR1Q08345 913 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 KCNMA1Q12791 1236 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 NFIAQ12857 509 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 WDR93Q6P2C0 686 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 C15orf52Q6ZUT6 534 aaKnown RBP16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 FAM114A1Q8IWE2 563 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 CCDC170Q8IYT3 715 aa16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 PURBQ96QR8 312 aaKnown RBP16.14■□□□□ 0.17
CCDC144A-205ENST00000399264 BUB1O43683 1085 aa16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 STAT3P40763 770 aa16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 ZSCAN26Q16670 478 aa16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 CREG2Q8IUH2 290 aa16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 RETREG2Q8NC44 543 aa16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 DNAJC19Q96DA6 116 aa16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 BCAS3Q9H6U6 928 aa16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 MYH7BA7E2Y1 1941 aa16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 AKR1B10O60218 316 aa16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 SPA17Q15506 151 aa16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 KRT79Q5XKE5 535 aa16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 DNAAF5Q86Y56 855 aa16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 BAP1Q92560 729 aa16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 FAM163AQ96GL9 167 aaPredicted RBP16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 DDX25Q9UHL0 483 aaKnown RBP16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 DMGDHQ9UI17 866 aaKnown RBP16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 LCMT1Q9UIC8 334 aa16.13■□□□□ 0.17
CCDC144A-205ENST00000399264 FAM193AP78312 1265 aa16.12■□□□□ 0.17
CCDC144A-205ENST00000399264 RASSF7Q02833 373 aa16.12■□□□□ 0.17
CCDC144A-205ENST00000399264 ZNF543Q08ER8 600 aa16.12■□□□□ 0.17
CCDC144A-205ENST00000399264 DEF6Q9H4E7 631 aa16.12■□□□□ 0.17
CCDC144A-205ENST00000399264 CALCOCO1Q9P1Z2 691 aa16.12■□□□□ 0.17
CCDC144A-205ENST00000399264 ESYT2A0FGR8 921 aa16.12■□□□□ 0.17
CCDC144A-205ENST00000399264 SYF2O95926 243 aaKnown RBP16.12■□□□□ 0.17
CCDC144A-205ENST00000399264 PLCG2P16885 1265 aa16.12■□□□□ 0.17
CCDC144A-205ENST00000399264 SHMT1P34896 483 aa16.12■□□□□ 0.17
CCDC144A-205ENST00000399264 ARID5AQ03989 594 aa16.12■□□□□ 0.17
CCDC144A-205ENST00000399264 TMEM266Q2M3C6 531 aa16.12■□□□□ 0.17
CCDC144A-205ENST00000399264 EXOC4Q96A65 974 aa16.12■□□□□ 0.17
CCDC144A-205ENST00000399264 LRRC1Q9BTT6 524 aa16.12■□□□□ 0.17
CCDC144A-205ENST00000399264 USP40Q9NVE5 1235 aa16.12■□□□□ 0.17
CCDC144A-205ENST00000399264 TAF1LQ8IZX4 1826 aa16.12■□□□□ 0.17
CCDC144A-205ENST00000399264 TRAF5O00463 557 aa16.11■□□□□ 0.17
CCDC144A-205ENST00000399264 MARCH6O60337 910 aa16.11■□□□□ 0.17
CCDC144A-205ENST00000399264 SNHG28P0DPA3 235 aa16.11■□□□□ 0.17
CCDC144A-205ENST00000399264 CAPN2P17655 700 aa16.11■□□□□ 0.17
CCDC144A-205ENST00000399264 SLC1A4P43007 532 aa16.11■□□□□ 0.17
CCDC144A-205ENST00000399264 EHHADHQ08426 723 aa16.11■□□□□ 0.17
CCDC144A-205ENST00000399264 COASYQ13057 564 aa16.11■□□□□ 0.17
CCDC144A-205ENST00000399264 MAN2A1Q16706 1144 aa16.11■□□□□ 0.17
CCDC144A-205ENST00000399264 SKIDA1Q1XH10 827 aa16.11■□□□□ 0.17
CCDC144A-205ENST00000399264 TXLNBQ8N3L3 684 aa16.11■□□□□ 0.17
CCDC144A-205ENST00000399264 GUF1Q8N442 669 aaKnown RBP16.11■□□□□ 0.17
CCDC144A-205ENST00000399264 MTMR8Q96EF0 704 aa16.11■□□□□ 0.17
CCDC144A-205ENST00000399264 P2RX7Q99572 595 aaKnown RBP16.11■□□□□ 0.17
CCDC144A-205ENST00000399264 SH2D4AQ9H788 454 aa16.11■□□□□ 0.17
CCDC144A-205ENST00000399264 ZC3H4Q9UPT8 1303 aaKnown RBP16.11■□□□□ 0.17
CCDC144A-205ENST00000399264 KIAA1024Q9UPX6 916 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms