RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CENPHQ9H3R5 247 aa15.47■□□□□ 0.07
APOB-202ENST00000399256 COL1A1P02452 1464 aaPredicted RBP15.46■□□□□ 0.07
APOB-202ENST00000399256 NUP98P52948 1817 aa15.46■□□□□ 0.07
APOB-202ENST00000399256 HPDP32754 393 aaPredicted RBP15.46■□□□□ 0.07
APOB-202ENST00000399256 MAATS1Q7Z4T9 603 aa15.46■□□□□ 0.07
APOB-202ENST00000399256 CCDC155Q8N6L0 562 aa15.46■□□□□ 0.07
APOB-202ENST00000399256 CASKIN2Q8WXE0 1202 aa15.46■□□□□ 0.07
APOB-202ENST00000399256 TCP11L1Q9NUJ3 509 aa15.46■□□□□ 0.07
APOB-202ENST00000399256 PACSIN2Q9UNF0 486 aaPredicted RBP15.46■□□□□ 0.07
APOB-202ENST00000399256 KIF5BP33176 963 aa15.46■□□□□ 0.07
APOB-202ENST00000399256 GLE1Q53GS7 698 aaKnown RBP15.46■□□□□ 0.07
APOB-202ENST00000399256 MICALCLQ6ZW33 695 aa15.46■□□□□ 0.07
APOB-202ENST00000399256 NLRP14Q86W24 1093 aa15.46■□□□□ 0.07
APOB-202ENST00000399256 CCT8L2Q96SF2 557 aa15.46■□□□□ 0.07
APOB-202ENST00000399256 E7EVH7 732 aa15.46■□□□□ 0.06
APOB-202ENST00000399256 IFT88Q13099 833 aa15.46■□□□□ 0.06
APOB-202ENST00000399256 SF3B2Q13435 895 aaKnown RBP15.46■□□□□ 0.06
APOB-202ENST00000399256 CACNA2D4Q7Z3S7 1137 aa15.46■□□□□ 0.06
APOB-202ENST00000399256 SPATS2Q86XZ4 545 aaKnown RBP15.46■□□□□ 0.06
APOB-202ENST00000399256 MYCBPAPQ8TBZ2 947 aa15.46■□□□□ 0.06
APOB-202ENST00000399256 GJD4Q96KN9 370 aaPredicted RBP15.46■□□□□ 0.06
APOB-202ENST00000399256 DLEC1Q9Y238 1755 aa15.45■□□□□ 0.06
APOB-202ENST00000399256 M0R2N6 131 aa15.45■□□□□ 0.06
APOB-202ENST00000399256 PJA2O43164 708 aa15.45■□□□□ 0.06
APOB-202ENST00000399256 PALMO75781 387 aa15.45■□□□□ 0.06
APOB-202ENST00000399256 CCDC152Q4G0S7 254 aa15.45■□□□□ 0.06
APOB-202ENST00000399256 RCSD1Q6JBY9 416 aa15.45■□□□□ 0.06
APOB-202ENST00000399256 BAP1Q92560 729 aa15.45■□□□□ 0.06
APOB-202ENST00000399256 ACSBG1Q96GR2 724 aa15.45■□□□□ 0.06
APOB-202ENST00000399256 ATP6V1G3Q96LB4 118 aa15.45■□□□□ 0.06
APOB-202ENST00000399256 C7orf25Q9BPX7 421 aa15.45■□□□□ 0.06
APOB-202ENST00000399256 NLRC4Q9NPP4 1024 aa15.45■□□□□ 0.06
APOB-202ENST00000399256 ORC4O43929 436 aa15.45■□□□□ 0.06
APOB-202ENST00000399256 MDH1P40925 334 aaKnown RBP15.45■□□□□ 0.06
APOB-202ENST00000399256 CEP85LQ5SZL2 805 aa15.45■□□□□ 0.06
APOB-202ENST00000399256 PAXIP1Q6ZW49 1069 aaPredicted RBP15.45■□□□□ 0.06
APOB-202ENST00000399256 PPANQ9NQ55 473 aaKnown RBP15.45■□□□□ 0.06
APOB-202ENST00000399256 PCP11498 1178 aaKnown RBP15.44■□□□□ 0.06
APOB-202ENST00000399256 LETM2Q2VYF4 491 aa15.44■□□□□ 0.06
APOB-202ENST00000399256 CNNM4Q6P4Q7 775 aa15.44■□□□□ 0.06
APOB-202ENST00000399256 TANGO6Q9C0B7 1094 aa15.44■□□□□ 0.06
APOB-202ENST00000399256 PLAAQ9Y263 795 aa15.44■□□□□ 0.06
APOB-202ENST00000399256 ERVV-1B6SEH8 477 aa15.44■□□□□ 0.06
APOB-202ENST00000399256 TECP42680 631 aa15.44■□□□□ 0.06
APOB-202ENST00000399256 MAN2A1Q16706 1144 aa15.44■□□□□ 0.06
APOB-202ENST00000399256 KCTD19Q17RG1 926 aaPredicted RBP15.44■□□□□ 0.06
APOB-202ENST00000399256 PDXDC1Q6P996 788 aa15.44■□□□□ 0.06
APOB-202ENST00000399256 IQCDQ96DY2 449 aa15.44■□□□□ 0.06
APOB-202ENST00000399256 CUEDC2Q9H467 287 aa15.44■□□□□ 0.06
APOB-202ENST00000399256 CCNT1O60563 726 aaKnown RBP15.43■□□□□ 0.06
APOB-202ENST00000399256 IBSPP21815 317 aaPredicted RBP15.43■□□□□ 0.06
APOB-202ENST00000399256 ATP6V1AP38606 617 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 ASTE1Q2TB18 679 aaPredicted RBP15.43■□□□□ 0.06
APOB-202ENST00000399256 KLHL7Q8IXQ5 586 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 DCP1AQ9NPI6 582 aaPredicted RBP15.43■□□□□ 0.06
APOB-202ENST00000399256 SH3GLB2Q9NR46 395 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 TRPC5Q9UL62 973 aaPredicted RBP15.43■□□□□ 0.06
APOB-202ENST00000399256 CACNA1SQ13698 1873 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 A0A0G2JS52 829 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 OR52Z1P0C646 297 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 SEMA3FQ13275 785 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 ITGB3BPQ13352 177 aaPredicted RBP15.43■□□□□ 0.06
APOB-202ENST00000399256 SLC35G1Q2M3R5 365 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 CENPPQ6IPU0 288 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 DYMQ7RTS9 669 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 PNMA1Q8ND90 353 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 EHHADHQ08426 723 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 ENOX2Q16206 610 aaKnown RBP15.43■□□□□ 0.06
APOB-202ENST00000399256 HGSNATQ68CP4 663 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 CCDC84Q86UT8 332 aaPredicted RBP15.43■□□□□ 0.06
APOB-202ENST00000399256 CCDC13Q8IYE1 715 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 OR2W6PQ8NHA6 318 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 VCPKMTQ9H867 229 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 MAGEF1Q9HAY2 307 aa15.43■□□□□ 0.06
APOB-202ENST00000399256 RAD51CO43502 376 aa15.42■□□□□ 0.06
APOB-202ENST00000399256 ACTN3Q08043 901 aaPredicted RBP15.42■□□□□ 0.06
APOB-202ENST00000399256 CD302Q8IX05 232 aa15.42■□□□□ 0.06
APOB-202ENST00000399256 PAGR1Q9BTK6 254 aa15.42■□□□□ 0.06
APOB-202ENST00000399256 TSKSQ9UJT2 592 aa15.42■□□□□ 0.06
APOB-202ENST00000399256 ZNF804BA4D1E1 1349 aa15.42■□□□□ 0.06
APOB-202ENST00000399256 PRPHP41219 470 aa15.42■□□□□ 0.06
APOB-202ENST00000399256 HLTFQ14527 1009 aaKnown RBP eCLIP15.42■□□□□ 0.06
APOB-202ENST00000399256 CCDC40Q4G0X9 1142 aa15.42■□□□□ 0.06
APOB-202ENST00000399256 YTHDF3Q7Z739 585 aaKnown RBP15.42■□□□□ 0.06
APOB-202ENST00000399256 MREGQ8N565 214 aa15.42■□□□□ 0.06
APOB-202ENST00000399256 PROCA1Q8NCQ7 364 aaPredicted RBP15.42■□□□□ 0.06
APOB-202ENST00000399256 ZKSCAN4Q969J2 545 aaPredicted RBP15.42■□□□□ 0.06
APOB-202ENST00000399256 KLC4Q9NSK0 619 aa15.42■□□□□ 0.06
APOB-202ENST00000399256 HMGB1P1B2RPK0 211 aaPredicted RBP15.41■□□□□ 0.06
APOB-202ENST00000399256 STXBP3O00186 592 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 FAM107AO95990 144 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 KLRC1P26715 233 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 PPP1R2P41236 205 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 AMPD3Q01432 767 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 TFAP4Q01664 338 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 DDR1Q08345 913 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 RNF10Q8N5U6 811 aaKnown RBP15.41■□□□□ 0.06
APOB-202ENST00000399256 CPVLQ9H3G5 476 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 COL4A1P02462 1669 aa15.41■□□□□ 0.06
APOB-202ENST00000399256 LAD1O00515 517 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms