RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 PDIA3P30101 505 aaKnown RBP19.25■□□□□ 0.67
APTR-201ENST00000398043 BMP8BP34820 402 aa19.25■□□□□ 0.67
APTR-201ENST00000398043 MAGEA10P43363 369 aaPredicted RBP19.25■□□□□ 0.67
APTR-201ENST00000398043 METAP2P50579 478 aaKnown RBP eCLIP19.25■□□□□ 0.67
APTR-201ENST00000398043 MRPS9P82933 396 aaKnown RBP19.25■□□□□ 0.67
APTR-201ENST00000398043 FGD1P98174 961 aa19.25■□□□□ 0.67
APTR-201ENST00000398043 NTRK3Q16288 839 aa19.25■□□□□ 0.67
APTR-201ENST00000398043 SH3RF1Q7Z6J0 888 aa19.25■□□□□ 0.67
APTR-201ENST00000398043 UPF3BQ9BZI7 483 aaKnown RBP19.25■□□□□ 0.67
APTR-201ENST00000398043 PSTPIP2Q9H939 334 aa19.25■□□□□ 0.67
APTR-201ENST00000398043 DDX41Q9UJV9 622 aaKnown RBP19.25■□□□□ 0.67
APTR-201ENST00000398043 CYP46A1Q9Y6A2 500 aa19.25■□□□□ 0.67
APTR-201ENST00000398043 A0A0U1RQG5 324 aaPredicted RBP19.24■□□□□ 0.67
APTR-201ENST00000398043 TRIM43BA6NCK2 446 aa19.24■□□□□ 0.67
APTR-201ENST00000398043 CABYRO75952 493 aa19.24■□□□□ 0.67
APTR-201ENST00000398043 ANAPC15P60006 121 aa19.24■□□□□ 0.67
APTR-201ENST00000398043 PURAQ00577 322 aaKnown RBP19.24■□□□□ 0.67
APTR-201ENST00000398043 ARHGAP1Q07960 439 aa19.24■□□□□ 0.67
APTR-201ENST00000398043 FAAP100Q0VG06 881 aa19.24■□□□□ 0.67
APTR-201ENST00000398043 LY6KQ17RY6 165 aa19.24■□□□□ 0.67
APTR-201ENST00000398043 OR6J1Q8NGC5 347 aa19.24■□□□□ 0.67
APTR-201ENST00000398043 TRIM43Q96BQ3 446 aaPredicted RBP19.24■□□□□ 0.67
APTR-201ENST00000398043 CCDC196A0A1B0GTZ2 297 aa19.23■□□□□ 0.67
APTR-201ENST00000398043 STXBP3O00186 592 aa19.23■□□□□ 0.67
APTR-201ENST00000398043 ARVCFO00192 962 aa19.23■□□□□ 0.67
APTR-201ENST00000398043 ZEB2O60315 1214 aa19.23■□□□□ 0.67
APTR-201ENST00000398043 MYCLP12524 364 aaPredicted RBP19.23■□□□□ 0.67
APTR-201ENST00000398043 PKN1Q16512 942 aa19.23■□□□□ 0.67
APTR-201ENST00000398043 HEATR3Q7Z4Q2 680 aa19.23■□□□□ 0.67
APTR-201ENST00000398043 EMID1Q96A84 441 aaPredicted RBP19.23■□□□□ 0.67
APTR-201ENST00000398043 hCG_1984214I3L0E3 225 aa19.22■□□□□ 0.67
APTR-201ENST00000398043 ITGB8P26012 769 aa19.22■□□□□ 0.67
APTR-201ENST00000398043 CCND2P30279 289 aa19.22■□□□□ 0.67
APTR-201ENST00000398043 CPT1AP50416 773 aa19.22■□□□□ 0.67
APTR-201ENST00000398043 SP2Q02086 613 aa19.22■□□□□ 0.67
APTR-201ENST00000398043 PFKFB3Q16875 520 aaPredicted RBP19.22■□□□□ 0.67
APTR-201ENST00000398043 PCNX4Q63HM2 1172 aa19.22■□□□□ 0.67
APTR-201ENST00000398043 FAM126BQ8IXS8 530 aa19.22■□□□□ 0.67
APTR-201ENST00000398043 ZNF713Q8N859 430 aaPredicted RBP19.22■□□□□ 0.67
APTR-201ENST00000398043 SMARCC2Q8TAQ2 1214 aa19.22■□□□□ 0.67
APTR-201ENST00000398043 CUL5Q93034 780 aa19.22■□□□□ 0.67
APTR-201ENST00000398043 ZFP91Q96JP5 570 aaPredicted RBP19.22■□□□□ 0.67
APTR-201ENST00000398043 INPP4AQ96PE3 977 aaPredicted RBP19.22■□□□□ 0.67
APTR-201ENST00000398043 BARHL2Q9NY43 387 aa19.22■□□□□ 0.67
APTR-201ENST00000398043 KIAA0355O15063 1070 aa19.21■□□□□ 0.67
APTR-201ENST00000398043 PRPF3O43395 683 aaKnown RBP19.21■□□□□ 0.67
APTR-201ENST00000398043 PQBP1O60828 265 aaKnown RBP19.21■□□□□ 0.67
APTR-201ENST00000398043 STAM2O75886 525 aa19.21■□□□□ 0.67
APTR-201ENST00000398043 GH1P01241 217 aa19.21■□□□□ 0.67
APTR-201ENST00000398043 CD4P01730 458 aa19.21■□□□□ 0.67
APTR-201ENST00000398043 CLTBP09497 229 aa19.21■□□□□ 0.67
APTR-201ENST00000398043 ICAM3P32942 547 aa19.21■□□□□ 0.67
APTR-201ENST00000398043 SEMA3FQ13275 785 aa19.21■□□□□ 0.67
APTR-201ENST00000398043 ITGA7Q13683 1181 aa19.21■□□□□ 0.67
APTR-201ENST00000398043 UBE2SQ16763 222 aa19.21■□□□□ 0.67
APTR-201ENST00000398043 PPP1R18Q6NYC8 613 aa19.21■□□□□ 0.67
APTR-201ENST00000398043 TEX2Q8IWB9 1127 aa19.21■□□□□ 0.67
APTR-201ENST00000398043 KAT6AQ92794 2004 aa19.21■□□□□ 0.67
APTR-201ENST00000398043 ZNF274Q96GC6 653 aaPredicted RBP19.21■□□□□ 0.67
APTR-201ENST00000398043 ALDH8A1Q9H2A2 487 aaPredicted RBP19.21■□□□□ 0.67
APTR-201ENST00000398043 RIC8AQ9NPQ8 531 aa19.21■□□□□ 0.67
APTR-201ENST00000398043 POLR3EQ9NVU0 708 aa19.21■□□□□ 0.67
APTR-201ENST00000398043 NAP1L2Q9ULW6 460 aaPredicted RBP19.21■□□□□ 0.67
APTR-201ENST00000398043 WDR81Q562E7 1941 aa19.21■□□□□ 0.67
APTR-201ENST00000398043 A0A1W2PPC1 479 aa19.2■□□□□ 0.66
APTR-201ENST00000398043 MMP3P08254 477 aa19.2■□□□□ 0.66
APTR-201ENST00000398043 TGFB3P10600 412 aa19.2■□□□□ 0.66
APTR-201ENST00000398043 IFNAR1P17181 557 aa19.2■□□□□ 0.66
APTR-201ENST00000398043 PSMC6P62333 389 aa19.2■□□□□ 0.66
APTR-201ENST00000398043 C8orf34Q49A92 452 aa19.2■□□□□ 0.66
APTR-201ENST00000398043 KCNV1Q6PIU1 500 aa19.2■□□□□ 0.66
APTR-201ENST00000398043 AFG1LQ8WV93 481 aa19.2■□□□□ 0.66
APTR-201ENST00000398043 NCOA5Q9HCD5 579 aaKnown RBP19.2■□□□□ 0.66
APTR-201ENST00000398043 PDRG1Q9NUG6 133 aa19.2■□□□□ 0.66
APTR-201ENST00000398043 TBX21Q9UL17 535 aa19.2■□□□□ 0.66
APTR-201ENST00000398043 MRVI1Q9Y6F6 885 aa19.2■□□□□ 0.66
APTR-201ENST00000398043 MROH7Q68CQ1 1323 aa19.2■□□□□ 0.66
APTR-201ENST00000398043 SPATA31C2B4DYI2 1134 aa19.19■□□□□ 0.66
APTR-201ENST00000398043 KPNA6O60684 536 aa19.19■□□□□ 0.66
APTR-201ENST00000398043 HOXD8P13378 290 aaPredicted RBP19.19■□□□□ 0.66
APTR-201ENST00000398043 SCG2P13521 617 aa19.19■□□□□ 0.66
APTR-201ENST00000398043 CLK2P49760 499 aaKnown RBP19.19■□□□□ 0.66
APTR-201ENST00000398043 NAPAP54920 295 aa19.19■□□□□ 0.66
APTR-201ENST00000398043 MDM2Q00987 491 aaPredicted RBP19.19■□□□□ 0.66
APTR-201ENST00000398043 MYSM1Q5VVJ2 828 aa19.19■□□□□ 0.66
APTR-201ENST00000398043 XRRA1Q6P2D8 792 aa19.19■□□□□ 0.66
APTR-201ENST00000398043 VTI1AQ96AJ9 217 aa19.19■□□□□ 0.66
APTR-201ENST00000398043 LARP6Q9BRS8 491 aaKnown RBP19.19■□□□□ 0.66
APTR-201ENST00000398043 SEZ6LQ9BYH1 1024 aa19.19■□□□□ 0.66
APTR-201ENST00000398043 LAMA3Q16787 3333 aa19.18■□□□□ 0.66
APTR-201ENST00000398043 DCDC2CA8MYV0 355 aa19.18■□□□□ 0.66
APTR-201ENST00000398043 ADAMTS3O15072 1205 aa19.18■□□□□ 0.66
APTR-201ENST00000398043 MYL3P08590 195 aa19.18■□□□□ 0.66
APTR-201ENST00000398043 UBA1P22314 1058 aaKnown RBP19.18■□□□□ 0.66
APTR-201ENST00000398043 CCT2P78371 535 aaKnown RBP19.18■□□□□ 0.66
APTR-201ENST00000398043 CELF3Q5SZQ8 465 aaKnown RBP19.18■□□□□ 0.66
APTR-201ENST00000398043 PPTC7Q8NI37 304 aa19.18■□□□□ 0.66
APTR-201ENST00000398043 PHKBQ93100 1093 aa19.18■□□□□ 0.66
APTR-201ENST00000398043 MTG1Q9BT17 334 aaPredicted RBP19.18■□□□□ 0.66
APTR-201ENST00000398043 RNF26Q9BY78 433 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms