RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 ZMAT2Q96NC0 199 aaKnown RBP7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 NLRP3Q96P20 1036 aa7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 TRIM8Q9BZR9 551 aa7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 TRIM4Q9C037 500 aa7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 LUZP4Q9P127 313 aa7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 TTLL3Q9Y4R7 772 aa7.27□□□□□ -1.24
TM9SF4-202ENST00000398022 EME2A4GXA9 379 aaPredicted RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 PPP1R12BO60237 982 aaPredicted RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 DIAPH2O60879 1101 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 GZMAP12544 262 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 ZFXP17010 805 aaPredicted RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 RASA1P20936 1047 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 CDC25BP30305 580 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 CCDC129Q6ZRS4 1044 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 MILR1Q7Z6M3 343 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 TMCO5AQ8N6Q1 288 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 SLC35B4Q969S0 331 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 EAF2Q96CJ1 260 aaPredicted RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 C8orf76Q96K31 380 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 AP1M1Q9BXS5 423 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 SIL1Q9H173 461 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 PRDM11Q9NQV5 511 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 SNRKQ9NRH2 765 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 TAGLN3Q9UI15 199 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 TIAM2Q8IVF5 1701 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 KIF2AO00139 706 aaPredicted RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 STK25O00506 426 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 RNMTO43148 476 aaKnown RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 KLHL41O60662 606 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 VIMP08670 466 aaKnown RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 TMOD1P28289 359 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 AIMP1Q12904 312 aaKnown RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 BNIP1Q12981 228 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 CWF19L2Q2TBE0 894 aaKnown RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 WDR44Q5JSH3 913 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 ATL3Q6DD88 541 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 PPP4R3AQ6IN85 833 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 FAM173BQ6P4H8 233 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 PODNQ7Z5L7 613 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 SGCDQ92629 289 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 BRF1Q92994 677 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 RELTQ969Z4 430 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 TCEANC2Q96MN5 208 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 BICC1Q9H694 974 aaKnown RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 ANO10Q9NW15 660 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 A0A0D9SFI3 127 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 ENO4A6NNW6 628 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 CTIFO43310 598 aaKnown RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 ZBED4O75132 1171 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 NOS2P35228 1153 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 TPD52P55327 224 aaPredicted RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 TPM4P67936 248 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 GUCY1B3Q02153 619 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 PABPC4Q13310 644 aaKnown RBP eCLIP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 SLC10A5Q5PT55 438 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 ZSCAN25Q6NSZ9 544 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 ERAP2Q6P179 960 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 RBM43Q6ZSC3 357 aaKnown RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 AMIGO3Q86WK7 504 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 ZNF784Q8NCA9 323 aaPredicted RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 GTF3C6Q969F1 213 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 ALPK1Q96QP1 1244 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 LLPHQ9BRT6 129 aaKnown RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 ALG1Q9BT22 464 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 NACAP1Q9BZK3 213 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 MRPL46Q9H2W6 279 aaKnown RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 SEMA4AQ9H3S1 761 aa7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 DDX21Q9NR30 783 aaKnown RBP eCLIP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 TYW1Q9NV66 732 aaKnown RBP7.27□□□□□ -1.25
TM9SF4-202ENST00000398022 KCNQ3O43525 872 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 PCP11498 1178 aaKnown RBP7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 RBL2Q08999 1139 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 PROSER3Q2NL68 480 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 ARHGEF18Q6ZSZ5 1173 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 SUCLG2Q96I99 432 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 DBNDD1Q9H9R9 158 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 TCP11L1Q9NUJ3 509 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 TNRC6CQ9HCJ0 1690 aaKnown RBP7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 ANKRD31Q8N7Z5 1873 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 PNPLA7Q6ZV29 1317 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 A0A1B0GUA9 196 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 SKIP12755 728 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 HALP42357 657 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 DSTYKQ6XUX3 929 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 BPHLQ86WA6 291 aaPredicted RBP7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 PLA2G4DQ86XP0 818 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 ESX1Q8N693 406 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 TRIML2Q8N7C3 387 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 EPS8L3Q8TE67 593 aaKnown RBP7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 SRRTQ9BXP5 876 aaKnown RBP7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 BCORQ6W2J9 1755 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 DICER1Q9UPY3 1922 aaKnown RBP7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 FAM177BA6PVY3 158 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 GOLGA8AA7E2F4 631 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 H0YC42 278 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 AP5Z1O43299 807 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 SNX2O60749 519 aa7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 ENDOUP21128 410 aaKnown RBP7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 MRPS35P82673 323 aaKnown RBP7.26□□□□□ -1.25
TM9SF4-202ENST00000398022 ST3GAL1Q11201 340 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms