RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 MBIPQ9NS73 344 aa2.55□□□□□ -2
HMGN2P39-201ENST00000398005 TRMT13Q9NUP7 481 aaKnown RBP2.55□□□□□ -2
HMGN2P39-201ENST00000398005 CGGBP1Q9UFW8 167 aaPredicted RBP2.55□□□□□ -2
HMGN2P39-201ENST00000398005 POLG2Q9UHN1 485 aa2.55□□□□□ -2
HMGN2P39-201ENST00000398005 FBXL21Q9UKT6 434 aa2.55□□□□□ -2
HMGN2P39-201ENST00000398005 LRCH1Q9Y2L9 728 aa2.55□□□□□ -2
HMGN2P39-201ENST00000398005 HIF3AQ9Y2N7 669 aa2.55□□□□□ -2
HMGN2P39-201ENST00000398005 COQ6Q9Y2Z9 468 aa2.55□□□□□ -2
HMGN2P39-201ENST00000398005 PCDHGB6Q9Y5F9 930 aa2.55□□□□□ -2
HMGN2P39-201ENST00000398005 PTPDC1A2A3K4 754 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 LRRC10BA6NIK2 292 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 A6NNZ2 444 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 PRSS47A8MTI9 375 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 H7C1W4 665 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 TRAF5O00463 557 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 PCDHGA12O60330 932 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 SNX2O60749 519 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 H2AFYO75367 372 aaKnown RBP2.54□□□□□ -2
HMGN2P39-201ENST00000398005 VAMP4O75379 141 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 KRT37O76014 449 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 RHOBTB3O94955 611 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 ZBED1O96006 694 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 CPP00450 1065 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 BCRP11274 1271 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 SLC5A1P13866 664 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 ATP2A2P16615 1042 aaKnown RBP2.54□□□□□ -2
HMGN2P39-201ENST00000398005 AKAP5P24588 427 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 GRK2P25098 689 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 ZEB1P37275 1124 aaPredicted RBP2.54□□□□□ -2
HMGN2P39-201ENST00000398005 GRK6P43250 576 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 DNM2P50570 870 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 TERF1P54274 439 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 KRT85P78386 507 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 GPSM2P81274 684 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 AMPD2Q01433 879 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 BTKQ06187 659 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 C19orf57Q0VDD7 668 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 TBX2Q13207 712 aaPredicted RBP2.54□□□□□ -2
HMGN2P39-201ENST00000398005 AUHQ13825 339 aaKnown RBP2.54□□□□□ -2
HMGN2P39-201ENST00000398005 LRRC32Q14392 662 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 KIAA0753Q2KHM9 967 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 DPY19L1Q2PZI1 675 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 TMEM177Q53S58 311 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 NBPF12Q5TAG4 269 aaPredicted RBP2.54□□□□□ -2
HMGN2P39-201ENST00000398005 DUSP27Q5VZP5 1158 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 CYB5RLQ6IPT4 315 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 MZT2AQ6P582 158 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 DARS2Q6PI48 645 aaKnown RBP2.54□□□□□ -2
HMGN2P39-201ENST00000398005 TXNDC11Q6PKC3 985 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 LVRNQ6Q4G3 990 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 B3GNT9Q6UX72 402 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 TTLL7Q6ZT98 887 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 CDC37L1Q7L3B6 337 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 SYT9Q86SS6 491 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 SLC41A1Q8IVJ1 513 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 CMIPQ8IY22 773 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 C7orf61Q8IZ16 206 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 FAM43AQ8N2R8 423 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 ARHGEF39Q8N4T4 335 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 MYCT1Q8N699 235 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 BEND7Q8N7W2 519 aaPredicted RBP2.54□□□□□ -2
HMGN2P39-201ENST00000398005 CHST14Q8NCH0 376 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 ZNF507Q8TCN5 953 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 XAGE3Q8WTP9 111 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 ACDQ96AP0 544 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 ERP27Q96DN0 273 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 SGCZQ96LD1 299 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 TEKT5Q96M29 485 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 TBATAQ96M53 351 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 FAM193BQ96PV7 902 aaPredicted RBP2.54□□□□□ -2
HMGN2P39-201ENST00000398005 TBCBQ99426 244 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 MAP3K14Q99558 947 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 ACO2Q99798 780 aaKnown RBP2.54□□□□□ -2
HMGN2P39-201ENST00000398005 ALG1Q9BT22 464 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 PHF20Q9BVI0 1012 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 APOL5Q9BWW9 433 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 USP26Q9BXU7 913 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 VPS11Q9H270 941 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 NKX2-4Q9H2Z4 354 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 SOX17Q9H6I2 414 aaPredicted RBP2.54□□□□□ -2
HMGN2P39-201ENST00000398005 GP6Q9HCN6 339 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 RAD18Q9NS91 495 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 SMC4Q9NTJ3 1288 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 SAGE1Q9NXZ1 904 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 RRN3Q9NYV6 651 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 RTEL1Q9NZ71 1219 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 H2AFY2Q9P0M6 372 aaPredicted RBP2.54□□□□□ -2
HMGN2P39-201ENST00000398005 B4GALT6Q9UBX8 382 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 ASAP1Q9ULH1 1129 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 SLC6A14Q9UN76 642 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 PTPN22Q9Y2R2 807 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 GPR55Q9Y2T6 319 aaPredicted RBP2.54□□□□□ -2
HMGN2P39-201ENST00000398005 NOC2LQ9Y3T9 749 aaKnown RBP2.54□□□□□ -2
HMGN2P39-201ENST00000398005 PCDHB12Q9Y5F1 795 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 PCDHGA9Q9Y5G4 932 aaKnown RBP2.54□□□□□ -2
HMGN2P39-201ENST00000398005 PCDHGA8Q9Y5G5 932 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 PCDHGA7Q9Y5G6 932 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 PCDHGA6Q9Y5G7 932 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 PCDHGA3Q9Y5H0 932 aa2.54□□□□□ -2
HMGN2P39-201ENST00000398005 PCDHGA2Q9Y5H1 932 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms