RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 TPTE2Q6XPS3 522 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 H2AFVQ71UI9 128 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 COA7Q96BR5 231 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 TBC1D31Q96DN5 1066 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 PIGSQ96S52 555 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 RNF14Q9UBS8 474 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 ATP8A1Q9Y2Q0 1164 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 A0A1B0GUA9 196 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 POTEMA6NI47 508 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 BUB1BO60566 1050 aaPredicted RBP12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 CRKLP46109 303 aaKnown RBP12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 SEC24CP53992 1094 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 SLC20A2Q08357 652 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 PKN1Q16512 942 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 LRRC47Q8N1G4 583 aaKnown RBP12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 NKX2-3Q8TAU0 364 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 MGARPQ8TDB4 240 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 HDAC7Q8WUI4 952 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 ZIM3Q96PE6 472 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 MEGF6O75095 1541 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 ERVV-1B6SEH8 477 aa12.21□□□□□ -0.46
CSGALNACT1-202ENST00000397998 FAM13AO94988 1023 aa12.21□□□□□ -0.46
CSGALNACT1-202ENST00000397998 RPSAP08865 295 aaKnown RBP12.21□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CLTAP09496 248 aa12.21□□□□□ -0.46
CSGALNACT1-202ENST00000397998 TNFAIP3P21580 790 aa12.21□□□□□ -0.46
CSGALNACT1-202ENST00000397998 IFNAR2P48551 515 aa12.21□□□□□ -0.46
CSGALNACT1-202ENST00000397998 DHX9Q08211 1270 aaKnown RBP12.21□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PAPD7Q5XG87 772 aaKnown RBP12.21□□□□□ -0.46
CSGALNACT1-202ENST00000397998 HOOK3Q86VS8 718 aa12.21□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PROCA1Q8NCQ7 364 aaPredicted RBP12.21□□□□□ -0.46
CSGALNACT1-202ENST00000397998 AMFRQ9UKV5 643 aa12.21□□□□□ -0.46
CSGALNACT1-202ENST00000397998 XRCC5P13010 732 aaKnown RBP12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ACTN3Q08043 901 aaPredicted RBP12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 DIXDC1Q155Q3 683 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 HS2ST1Q7LGA3 356 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ZNF804AQ7Z570 1209 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 WHAMMQ8TF30 809 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 RSRC1Q96IZ7 334 aaKnown RBP12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SH2D4AQ9H788 454 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 KIAA1024Q9UPX6 916 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CACNA1FO60840 1977 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PDS5AQ29RF7 1337 aaKnown RBP12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 RHOBTB3O94955 611 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SERPING1P05155 500 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ARHGAP44Q17R89 818 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 WDR66Q8TBY9 1149 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 DNAJC7Q99615 494 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 TCRBV5S4A2TA0A5A2 114 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 RGS16O15492 202 aaPredicted RBP12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 NR2F2P24468 414 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PDXDC2PQ6P474 469 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 LRP10Q7Z4F1 713 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 GIMAP8Q8ND71 665 aaPredicted RBP12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 DDX12PQ92771 950 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CUL5Q93034 780 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CTDP1Q9Y5B0 961 aaPredicted RBP12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CNTNAP5Q8WYK1 1306 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 XRN1Q8IZH2 1706 aaKnown RBP12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 HMGB1P1B2RPK0 211 aaPredicted RBP12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CTNND1O60716 968 aaKnown RBP12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 GCNT3O95395 438 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CYP19A1P11511 503 aaPredicted RBP12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PRPHP41219 470 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CALCOCO2Q13137 446 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SNCBQ16143 134 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 FAM83BQ5T0W9 1011 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 DENND2CQ68D51 928 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 MED15Q96RN5 788 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ODF2LQ9ULJ1 636 aa12.2□□□□□ -0.46
CSGALNACT1-202ENST00000397998 FAM208AQ9UK61 1670 aaKnown RBP12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 RICTORQ6R327 1708 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 A0A1W2PRG0 241 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 MYO1FO00160 1098 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PGRMC1O00264 195 aaKnown RBP12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 WNT7AO00755 349 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PPP1R37O75864 691 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 MYBL2P10244 700 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 GUCY2CP25092 1073 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 EXOC3L4Q17RC7 722 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ERFEQ4G0M1 354 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 GLE1Q53GS7 698 aaKnown RBP12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 RDH13Q8NBN7 331 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 TCP11Q8WWU5 503 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 DDX47Q9H0S4 455 aaKnown RBP12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 RIC8AQ9NPQ8 531 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CTTNBP2NLQ9P2B4 639 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SPDYE3A6NKU9 549 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PDE2AO00408 941 aaPredicted RBP12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 MEFVO15553 781 aaPredicted RBP12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 GNA14O95837 355 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SYF2O95926 243 aaKnown RBP12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 STAT1P42224 750 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 KCNQ4P56696 695 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SEC23AQ15436 765 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 GRIPAP1Q4V328 841 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 NLRP14Q86W24 1093 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 DGKHQ86XP1 1220 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SYCE1Q8N0S2 351 aa12.19□□□□□ -0.46
CSGALNACT1-202ENST00000397998 TACO1Q9BSH4 297 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms