RNA–Protein interactions for RNA: ENST00000397916.1

TSPEAR-202, Transcript of thrombospondin type laminin G domain and EAR repeats, humanhuman

TSL 1 (best) BASIC

Gene TSPEAR, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPEAR-202ENST00000397916 SLFN12Q8IYM2 578 aa18.23■□□□□ 0.51
TSPEAR-202ENST00000397916 REPS2Q8NFH8 660 aa18.23■□□□□ 0.51
TSPEAR-202ENST00000397916 CALML4Q96GE6 196 aa18.23■□□□□ 0.51
TSPEAR-202ENST00000397916 HSD3B7Q9H2F3 369 aa18.23■□□□□ 0.51
TSPEAR-202ENST00000397916 HOMER2Q9NSB8 354 aa18.23■□□□□ 0.51
TSPEAR-202ENST00000397916 TMOD4Q9NZQ9 345 aa18.23■□□□□ 0.51
TSPEAR-202ENST00000397916 COL20A1Q9P218 1284 aa18.23■□□□□ 0.51
TSPEAR-202ENST00000397916 RBBP6Q7Z6E9 1792 aaKnown RBP18.23■□□□□ 0.51
TSPEAR-202ENST00000397916 DSG3P32926 999 aa18.22■□□□□ 0.51
TSPEAR-202ENST00000397916 IREB2P48200 963 aaKnown RBP18.22■□□□□ 0.51
TSPEAR-202ENST00000397916 UBXN2AP68543 259 aa18.22■□□□□ 0.51
TSPEAR-202ENST00000397916 SPIRE1Q08AE8 756 aa18.22■□□□□ 0.51
TSPEAR-202ENST00000397916 EAPPQ56P03 285 aaPredicted RBP18.22■□□□□ 0.51
TSPEAR-202ENST00000397916 SNX29Q8TEQ0 813 aa18.22■□□□□ 0.51
TSPEAR-202ENST00000397916 MAGEF1Q9HAY2 307 aa18.22■□□□□ 0.51
TSPEAR-202ENST00000397916 SMTNL1A8MU46 457 aa18.22■□□□□ 0.51
TSPEAR-202ENST00000397916 MSH4O15457 936 aa18.22■□□□□ 0.51
TSPEAR-202ENST00000397916 PTGS1P23219 599 aa18.22■□□□□ 0.51
TSPEAR-202ENST00000397916 COG2Q14746 738 aa18.22■□□□□ 0.51
TSPEAR-202ENST00000397916 ECM1Q16610 540 aa18.22■□□□□ 0.51
TSPEAR-202ENST00000397916 KRT79Q5XKE5 535 aa18.22■□□□□ 0.51
TSPEAR-202ENST00000397916 MOB2Q70IA6 237 aa18.22■□□□□ 0.51
TSPEAR-202ENST00000397916 RBM46Q8TBY0 533 aaKnown RBP18.22■□□□□ 0.51
TSPEAR-202ENST00000397916 BLOC1S4Q9NUP1 217 aa18.22■□□□□ 0.51
TSPEAR-202ENST00000397916 IQCA1LA6NCM1 817 aa18.21■□□□□ 0.51
TSPEAR-202ENST00000397916 RRP9O43818 475 aaKnown RBP18.21■□□□□ 0.51
TSPEAR-202ENST00000397916 RPN1P04843 607 aaKnown RBP18.21■□□□□ 0.51
TSPEAR-202ENST00000397916 MYL1P05976 194 aa18.21■□□□□ 0.51
TSPEAR-202ENST00000397916 ZNF76P36508 570 aa18.21■□□□□ 0.51
TSPEAR-202ENST00000397916 MYL5Q02045 173 aa18.21■□□□□ 0.51
TSPEAR-202ENST00000397916 FMR1Q06787 632 aaKnown RBP eCLIP18.21■□□□□ 0.51
TSPEAR-202ENST00000397916 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.21■□□□□ 0.51
TSPEAR-202ENST00000397916 MCF2L2Q86YR7 1114 aa18.21■□□□□ 0.51
TSPEAR-202ENST00000397916 RIPK3Q9Y572 518 aa18.21■□□□□ 0.51
TSPEAR-202ENST00000397916 CTDP1Q9Y5B0 961 aaPredicted RBP18.21■□□□□ 0.51
TSPEAR-202ENST00000397916 CD44P16070 742 aaKnown RBP18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 TMEM119Q4V9L6 283 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 DRC7Q8IY82 874 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 SMYD4Q8IYR2 804 aaPredicted RBP18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 CLMNQ96JQ2 1002 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 FAM20AQ96MK3 541 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 MED15Q96RN5 788 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 EHMT1Q9H9B1 1298 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 ELP3Q9H9T3 547 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 DACH1Q9UI36 760 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 ZNF214Q9UL59 606 aaPredicted RBP18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 KLRC4O43908 158 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 CDC25BP30305 580 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 NF2P35240 595 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 STAT3P40763 770 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 CCDC186Q7Z3E2 898 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 MRFAP1L1Q96HT8 127 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 TRERF1Q96PN7 1200 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 STK17AQ9UEE5 414 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 PNMA2Q9UL42 364 aa18.2■□□□□ 0.5
TSPEAR-202ENST00000397916 RPTORQ8N122 1335 aa18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 GOLGA6L6A8MZA4 724 aa18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 TMEM132BQ14DG7 1078 aa18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 CCDC144BQ3MJ40 725 aa18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 HYIQ5T013 277 aa18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 KCNK18Q7Z418 384 aa18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 ANKRD13AQ8IZ07 590 aa18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 CDK5RAP3Q96JB5 506 aa18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 TRIM9Q9C026 710 aa18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 SPDYE16A6NNV3 312 aaPredicted RBP18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 PPP1R3GB7ZBB8 358 aa18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 IRF6O14896 467 aa18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 OAZ1P54368 228 aa18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 RPS6P62753 249 aaKnown RBP18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 CEP55Q53EZ4 464 aa18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 TREML2Q5T2D2 321 aa18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 C17orf53Q8N3J3 647 aaPredicted RBP18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 SYTL5Q8TDW5 730 aaPredicted RBP18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 MAP3K20Q9NYL2 800 aaKnown RBP18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 VAV3Q9UKW4 847 aa18.19■□□□□ 0.5
TSPEAR-202ENST00000397916 POTEIP0CG38 1075 aa18.18■□□□□ 0.5
TSPEAR-202ENST00000397916 POTEJP0CG39 1038 aa18.18■□□□□ 0.5
TSPEAR-202ENST00000397916 ERCC5P28715 1186 aaPredicted RBP18.18■□□□□ 0.5
TSPEAR-202ENST00000397916 PPATQ06203 517 aa18.18■□□□□ 0.5
TSPEAR-202ENST00000397916 MCM6Q14566 821 aa18.18■□□□□ 0.5
TSPEAR-202ENST00000397916 PNMA8AQ86V59 439 aaPredicted RBP18.18■□□□□ 0.5
TSPEAR-202ENST00000397916 LARP4BQ92615 738 aaKnown RBP18.18■□□□□ 0.5
TSPEAR-202ENST00000397916 RAD54LQ92698 747 aa18.18■□□□□ 0.5
TSPEAR-202ENST00000397916 OTUD5Q96G74 571 aa18.18■□□□□ 0.5
TSPEAR-202ENST00000397916 ZFP91Q96JP5 570 aaPredicted RBP18.18■□□□□ 0.5
TSPEAR-202ENST00000397916 C7orf25Q9BPX7 421 aa18.18■□□□□ 0.5
TSPEAR-202ENST00000397916 RMND1Q9NWS8 449 aa18.18■□□□□ 0.5
TSPEAR-202ENST00000397916 LOC285556D6RIA3 1793 aa18.18■□□□□ 0.5
TSPEAR-202ENST00000397916 ATP1A3P13637 1013 aa18.17■□□□□ 0.5
TSPEAR-202ENST00000397916 KCNB1Q14721 858 aa18.17■□□□□ 0.5
TSPEAR-202ENST00000397916 KMT5BQ4FZB7 885 aa18.17■□□□□ 0.5
TSPEAR-202ENST00000397916 CT47A1Q5JQC4 288 aaPredicted RBP18.17■□□□□ 0.5
TSPEAR-202ENST00000397916 ZNF658Q5TYW1 1059 aaPredicted RBP18.17■□□□□ 0.5
TSPEAR-202ENST00000397916 SNRNP48Q6IEG0 339 aaKnown RBP18.17■□□□□ 0.5
TSPEAR-202ENST00000397916 SLC30A10Q6XR72 485 aa18.17■□□□□ 0.5
TSPEAR-202ENST00000397916 TRMT44Q8IYL2 757 aaKnown RBP18.17■□□□□ 0.5
TSPEAR-202ENST00000397916 SAMD3Q8N6K7 520 aa18.17■□□□□ 0.5
TSPEAR-202ENST00000397916 IL31RAQ8NI17 732 aa18.17■□□□□ 0.5
TSPEAR-202ENST00000397916 ENOX1Q8TC92 643 aaKnown RBP18.17■□□□□ 0.5
TSPEAR-202ENST00000397916 RNF146Q9NTX7 359 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms