RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 ASAP2O43150 1006 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 USO1O60763 962 aaKnown RBP12.67□□□□□ -0.38
PUM3-202ENST00000397885 DIAPH2O60879 1101 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 SMIM24O75264 130 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 GNAT1P11488 350 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 DRD4P21917 467 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 CCT6AP40227 531 aaKnown RBP12.67□□□□□ -0.38
PUM3-202ENST00000397885 MRPS35P82673 323 aaKnown RBP12.67□□□□□ -0.38
PUM3-202ENST00000397885 SGSM1Q2NKQ1 1148 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 TCP11X2Q5H9J9 407 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 RETREG2Q8NC44 543 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 EPAS1Q99814 870 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 GORASP1Q9BQQ3 440 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 LMCD1Q9NZU5 365 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 TSKSQ9UJT2 592 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.67□□□□□ -0.38
PUM3-202ENST00000397885 CEP131Q9UPN4 1083 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 SRPRBQ9Y5M8 271 aaKnown RBP12.67□□□□□ -0.38
PUM3-202ENST00000397885 NDUFB9Q9Y6M9 179 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 LRRD1A4D1F6 860 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 RNF8O76064 485 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 CLTAP09496 248 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 CTCFP49711 727 aaPredicted RBP12.67□□□□□ -0.38
PUM3-202ENST00000397885 KLHL10Q6JEL2 608 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 RAPGEF5Q92565 580 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 MMTAG2Q9BU76 263 aaKnown RBP12.67□□□□□ -0.38
PUM3-202ENST00000397885 LACRTQ9GZZ8 138 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 GPR108Q9NPR9 543 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 L3MBTL1Q9Y468 752 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 SPEF2Q9C093 1822 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 KIF13BQ9NQT8 1826 aa12.67□□□□□ -0.38
PUM3-202ENST00000397885 GPR75-ASB3A0A0A6YYF3 556 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 STARD3NLO95772 234 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 CDC25AP30304 524 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 STX17P56962 302 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 DYNC1I2Q13409 638 aaKnown RBP12.66□□□□□ -0.38
PUM3-202ENST00000397885 RILPL1Q5EBL4 403 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 CHST3Q7LGC8 479 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 ATL2Q8NHH9 583 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 CHMP6Q96FZ7 201 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 ZNF496Q96IT1 587 aaPredicted RBP12.66□□□□□ -0.38
PUM3-202ENST00000397885 OSBPL1AQ9BXW6 950 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 NFU1Q9UMS0 254 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 PLAAQ9Y263 795 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 ASB3Q9Y575 518 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 PRC1O43663 620 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 ZPR1O75312 459 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 PYGLP06737 847 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 HPDP32754 393 aaPredicted RBP12.66□□□□□ -0.38
PUM3-202ENST00000397885 CARSP49589 748 aaKnown RBP12.66□□□□□ -0.38
PUM3-202ENST00000397885 CUL3Q13618 768 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 CFAP221Q4G0U5 840 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 LRRC23Q53EV4 343 aaPredicted RBP12.66□□□□□ -0.38
PUM3-202ENST00000397885 C1QTNF12Q5T7M4 302 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 PNMA8AQ86V59 439 aaPredicted RBP12.66□□□□□ -0.38
PUM3-202ENST00000397885 MB21D2Q8IYB1 491 aaPredicted RBP12.66□□□□□ -0.38
PUM3-202ENST00000397885 PLBD2Q8NHP8 589 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 RBM41Q96IZ5 413 aaKnown RBP12.66□□□□□ -0.38
PUM3-202ENST00000397885 VPS16Q9H269 839 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 ANAPC4Q9UJX5 808 aa12.66□□□□□ -0.38
PUM3-202ENST00000397885 KCNJ18B7U540 433 aa12.65□□□□□ -0.38
PUM3-202ENST00000397885 TGFB2P61812 414 aa12.65□□□□□ -0.38
PUM3-202ENST00000397885 UBXN1Q04323 297 aa12.65□□□□□ -0.38
PUM3-202ENST00000397885 KCNJ12Q14500 433 aa12.65□□□□□ -0.38
PUM3-202ENST00000397885 ANKRD20A2Q5SQ80 823 aa12.65□□□□□ -0.38
PUM3-202ENST00000397885 ANKRD20A1Q5TYW2 823 aa12.65□□□□□ -0.38
PUM3-202ENST00000397885 HHATQ5VTY9 493 aa12.65□□□□□ -0.38
PUM3-202ENST00000397885 ANKRD20A3Q5VUR7 823 aa12.65□□□□□ -0.38
PUM3-202ENST00000397885 APBB1IPQ7Z5R6 666 aaPredicted RBP12.65□□□□□ -0.38
PUM3-202ENST00000397885 NOSTRINQ8IVI9 506 aa12.65□□□□□ -0.38
PUM3-202ENST00000397885 MB21D1Q8N884 522 aa12.65□□□□□ -0.38
PUM3-202ENST00000397885 LRRC45Q96CN5 670 aa12.65□□□□□ -0.38
PUM3-202ENST00000397885 NEUROD6Q96NK8 337 aa12.65□□□□□ -0.38
PUM3-202ENST00000397885 SEC31BQ9NQW1 1179 aa12.65□□□□□ -0.38
PUM3-202ENST00000397885 PANK4Q9NVE7 773 aa12.65□□□□□ -0.38
PUM3-202ENST00000397885 MYO5AQ9Y4I1 1855 aaKnown RBP12.65□□□□□ -0.38
PUM3-202ENST00000397885 LAMB4A4D0S4 1761 aa12.65□□□□□ -0.38
PUM3-202ENST00000397885 RCCD1A6NED2 376 aa12.65□□□□□ -0.39
PUM3-202ENST00000397885 E7ENQ6 273 aa12.65□□□□□ -0.39
PUM3-202ENST00000397885 FLOT1O75955 427 aa12.65□□□□□ -0.39
PUM3-202ENST00000397885 WFS1O76024 890 aa12.65□□□□□ -0.39
PUM3-202ENST00000397885 FAM153BP0C7A2 387 aa12.65□□□□□ -0.39
PUM3-202ENST00000397885 NQO1P15559 274 aaKnown RBP12.65□□□□□ -0.39
PUM3-202ENST00000397885 ATP2A2P16615 1042 aaKnown RBP12.65□□□□□ -0.39
PUM3-202ENST00000397885 YBX3P16989 372 aaKnown RBP eCLIP12.65□□□□□ -0.39
PUM3-202ENST00000397885 ALDH3A1P30838 453 aa12.65□□□□□ -0.39
PUM3-202ENST00000397885 ABL2P42684 1182 aa12.65□□□□□ -0.39
PUM3-202ENST00000397885 ZNF131P52739 623 aa12.65□□□□□ -0.39
PUM3-202ENST00000397885 DPYDQ12882 1025 aa12.65□□□□□ -0.39
PUM3-202ENST00000397885 FAM153CQ494X1 144 aa12.65□□□□□ -0.39
PUM3-202ENST00000397885 LMBR1LQ6UX01 489 aa12.65□□□□□ -0.39
PUM3-202ENST00000397885 LRP10Q7Z4F1 713 aa12.65□□□□□ -0.39
PUM3-202ENST00000397885 GRAMD1CQ8IYS0 662 aa12.65□□□□□ -0.39
PUM3-202ENST00000397885 IQCDQ96DY2 449 aa12.65□□□□□ -0.39
PUM3-202ENST00000397885 NAF1Q96HR8 494 aaKnown RBP12.65□□□□□ -0.39
PUM3-202ENST00000397885 NHEJ1Q9H9Q4 299 aaPredicted RBP12.65□□□□□ -0.39
PUM3-202ENST00000397885 FAM153AQ9UHL3 310 aa12.65□□□□□ -0.39
PUM3-202ENST00000397885 GRID2IPA4D2P6 1211 aa12.64□□□□□ -0.39
PUM3-202ENST00000397885 LGALS16A8MUM7 142 aa12.64□□□□□ -0.39
PUM3-202ENST00000397885 F8W031 263 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms