RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 CETN1Q12798 172 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 PABPC4Q13310 644 aaKnown RBP eCLIP6.53□□□□□ -1.36
PTPRD-206ENST00000397617 EPHA7Q15375 998 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 CACTINQ8WUQ7 758 aaKnown RBP6.53□□□□□ -1.36
PTPRD-206ENST00000397617 MAN1B1Q9UKM7 699 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 ADAMTS5Q9UNA0 930 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 KCNJ14Q9UNX9 436 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 AKR1B15C9JRZ8 316 aaPredicted RBP6.53□□□□□ -1.36
PTPRD-206ENST00000397617 KLRC4O43908 158 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 ICAM1P05362 532 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 JAK3P52333 1124 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 PIK3AP1Q6ZUJ8 805 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 C11orf57Q6ZUT1 292 aaPredicted RBP6.53□□□□□ -1.36
PTPRD-206ENST00000397617 RASGRP2Q7LDG7 609 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 TBCKQ8TEA7 893 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 DNAJC7Q99615 494 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 NTPCRQ9BSD7 190 aaKnown RBP6.53□□□□□ -1.36
PTPRD-206ENST00000397617 RTN4Q9NQC3 1192 aaKnown RBP6.53□□□□□ -1.36
PTPRD-206ENST00000397617 TMEM51Q9NW97 253 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 VWA3AA6NCI4 1184 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 CXCL11O14625 94 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 EYA4O95677 639 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 BMP6P22004 513 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 TYW1BQ6NUM6 668 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 VPS36Q86VN1 386 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 AMIGO3Q86WK7 504 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 GPRASP2Q96D09 838 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 AIFM3Q96NN9 605 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 FAM198AQ9UFP1 575 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 GUCY1A2P33402 732 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 SLC26A2P50443 739 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 EIF6P56537 245 aaKnown RBP6.53□□□□□ -1.36
PTPRD-206ENST00000397617 PCBP1Q15365 356 aaKnown RBP eCLIP6.53□□□□□ -1.36
PTPRD-206ENST00000397617 SYDE2Q5VT97 1194 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 HS2ST1Q7LGA3 356 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 MCPH1Q8NEM0 835 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 PDCL3Q9H2J4 239 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 FILIP1Q7Z7B0 1213 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 SENP2Q9HC62 589 aa6.53□□□□□ -1.36
PTPRD-206ENST00000397617 ARGLU1Q9NWB6 273 aaPredicted RBP6.53□□□□□ -1.36
PTPRD-206ENST00000397617 CETN3O15182 167 aa6.52□□□□□ -1.36
PTPRD-206ENST00000397617 PTGER2P43116 358 aa6.52□□□□□ -1.36
PTPRD-206ENST00000397617 HSD17B4P51659 736 aa6.52□□□□□ -1.36
PTPRD-206ENST00000397617 FRMD5Q7Z6J6 570 aa6.52□□□□□ -1.36
PTPRD-206ENST00000397617 SPIRE2Q8WWL2 714 aa6.52□□□□□ -1.36
PTPRD-206ENST00000397617 INPP4AQ96PE3 977 aaPredicted RBP6.52□□□□□ -1.36
PTPRD-206ENST00000397617 KIAA1586Q9HCI6 787 aa6.52□□□□□ -1.36
PTPRD-206ENST00000397617 CCDC151A5D8V7 595 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 N4BP3O15049 544 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 KIF4BQ2VIQ3 1234 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 ZNF746Q6NUN9 644 aaPredicted RBP6.52□□□□□ -1.37
PTPRD-206ENST00000397617 HEATR3Q7Z4Q2 680 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 SGIP1Q9BQI5 828 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 TSGA10Q9BZW7 698 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 SERTAD1Q9UHV2 236 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 PRKCIP41743 596 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 INF2Q27J81 1249 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 DNAJC18Q9H819 358 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 PPP1R3GB7ZBB8 358 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 KRT86O43790 486 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 SLC35G1Q2M3R5 365 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 ETNPPLQ8TBG4 499 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 RABGGTAQ92696 567 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 L3MBTL3Q96JM7 780 aaPredicted RBP6.52□□□□□ -1.37
PTPRD-206ENST00000397617 TEX13BQ9BXU2 312 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 SLC38A10Q9HBR0 1119 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 PCDHB13Q9Y5F0 798 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 CCZ1BP86790 482 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 CCZ1P86791 482 aaPredicted RBP6.52□□□□□ -1.37
PTPRD-206ENST00000397617 SPIRE1Q08AE8 756 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 OTUD7BQ6GQQ9 843 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 CABP7Q86V35 215 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 MYOCDQ8IZQ8 938 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 HNRNPLLQ8WVV9 542 aaKnown RBP6.52□□□□□ -1.37
PTPRD-206ENST00000397617 MYL10Q9BUA6 226 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 PPP1R9AQ9ULJ8 1098 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 CAPN11Q9UMQ6 739 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 A0A0G2JLW4 131 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 POU5F1BQ06416 359 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 RASSF8Q8NHQ8 419 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 SLC5A5Q92911 643 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 ZNF622Q969S3 477 aaKnown RBP eCLIP6.52□□□□□ -1.37
PTPRD-206ENST00000397617 LENG9Q96B70 501 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 BAG1Q99933 345 aaPredicted RBP6.52□□□□□ -1.37
PTPRD-206ENST00000397617 FAM129AQ9BZQ8 928 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 DDX4Q9NQI0 724 aaKnown RBP6.52□□□□□ -1.37
PTPRD-206ENST00000397617 FANCLQ9NW38 375 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 ZNF70Q9UC06 446 aaPredicted RBP6.52□□□□□ -1.37
PTPRD-206ENST00000397617 BTNL10A8MVZ5 291 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 CES2O00748 559 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 LMOD1P29536 600 aaPredicted RBP6.52□□□□□ -1.37
PTPRD-206ENST00000397617 NFIAQ12857 509 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 TCEAL1Q15170 157 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 IFNKQ9P0W0 207 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 DNM3Q9UQ16 869 aa6.52□□□□□ -1.37
PTPRD-206ENST00000397617 NFASCO94856 1347 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 RPTORQ8N122 1335 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 MFAP3LO75121 409 aa6.51□□□□□ -1.37
PTPRD-206ENST00000397617 ZC3H11AO75152 810 aaKnown RBP eCLIP6.51□□□□□ -1.37
PTPRD-206ENST00000397617 IFI16Q16666 785 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms