RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 ZEB2O60315 1214 aa29.08■■■□□ 2.25
TSPAN4-207ENST00000397411 KCNA10Q16322 511 aa29.08■■■□□ 2.25
TSPAN4-207ENST00000397411 TEX2Q8IWB9 1127 aa29.08■■■□□ 2.25
TSPAN4-207ENST00000397411 IL31RAQ8NI17 732 aa29.08■■■□□ 2.25
TSPAN4-207ENST00000397411 TSEN34Q9BSV6 310 aaKnown RBP29.08■■■□□ 2.25
TSPAN4-207ENST00000397411 BACH2Q9BYV9 841 aa29.08■■■□□ 2.25
TSPAN4-207ENST00000397411 UPF3AQ9H1J1 476 aaKnown RBP29.08■■■□□ 2.25
TSPAN4-207ENST00000397411 MRVI1Q9Y6F6 885 aa29.08■■■□□ 2.25
TSPAN4-207ENST00000397411 FOSP01100 380 aaPredicted RBP29.07■■■□□ 2.24
TSPAN4-207ENST00000397411 GNA11P29992 359 aa29.07■■■□□ 2.24
TSPAN4-207ENST00000397411 NLRP5P59047 1200 aa29.07■■■□□ 2.24
TSPAN4-207ENST00000397411 TMEM63BQ5T3F8 832 aa29.07■■■□□ 2.24
TSPAN4-207ENST00000397411 KIAA1217Q5T5P2 1943 aa29.07■■■□□ 2.24
TSPAN4-207ENST00000397411 KLHDC9Q8NEP7 349 aa29.07■■■□□ 2.24
TSPAN4-207ENST00000397411 OR6J1Q8NGC5 347 aa29.07■■■□□ 2.24
TSPAN4-207ENST00000397411 VTI1AQ96AJ9 217 aa29.07■■■□□ 2.24
TSPAN4-207ENST00000397411 ST18O60284 1047 aa29.06■■■□□ 2.24
TSPAN4-207ENST00000397411 COL6A1P12109 1028 aa29.06■■■□□ 2.24
TSPAN4-207ENST00000397411 BEX3Q00994 111 aa29.06■■■□□ 2.24
TSPAN4-207ENST00000397411 BRDTQ58F21 947 aaPredicted RBP29.06■■■□□ 2.24
TSPAN4-207ENST00000397411 XRRA1Q6P2D8 792 aa29.06■■■□□ 2.24
TSPAN4-207ENST00000397411 KCNV1Q6PIU1 500 aa29.06■■■□□ 2.24
TSPAN4-207ENST00000397411 BICD2Q8TD16 824 aa29.06■■■□□ 2.24
TSPAN4-207ENST00000397411 SH3GLB2Q9NR46 395 aa29.06■■■□□ 2.24
TSPAN4-207ENST00000397411 RTEL1Q9NZ71 1219 aa29.06■■■□□ 2.24
TSPAN4-207ENST00000397411 VPS54Q9P1Q0 977 aa29.06■■■□□ 2.24
TSPAN4-207ENST00000397411 MYADML2A6NDP7 307 aa29.05■■■□□ 2.24
TSPAN4-207ENST00000397411 EVI5O60447 810 aa29.05■■■□□ 2.24
TSPAN4-207ENST00000397411 STAM2O75886 525 aa29.05■■■□□ 2.24
TSPAN4-207ENST00000397411 LARGE1O95461 756 aa29.05■■■□□ 2.24
TSPAN4-207ENST00000397411 ATN1P54259 1190 aaPredicted RBP29.05■■■□□ 2.24
TSPAN4-207ENST00000397411 FSCN1Q16658 493 aaKnown RBP29.05■■■□□ 2.24
TSPAN4-207ENST00000397411 LY6KQ17RY6 165 aa29.05■■■□□ 2.24
TSPAN4-207ENST00000397411 GNPTABQ3T906 1256 aa29.05■■■□□ 2.24
TSPAN4-207ENST00000397411 GTF3C6Q969F1 213 aa29.05■■■□□ 2.24
TSPAN4-207ENST00000397411 ZSCAN31Q96LW9 406 aaPredicted RBP29.05■■■□□ 2.24
TSPAN4-207ENST00000397411 ZMYND12Q9H0C1 365 aa29.05■■■□□ 2.24
TSPAN4-207ENST00000397411 PHF24Q9UPV7 400 aa29.05■■■□□ 2.24
TSPAN4-207ENST00000397411 ESYT2A0FGR8 921 aa29.04■■■□□ 2.24
TSPAN4-207ENST00000397411 MOXD2PA6NHM9 499 aa29.04■■■□□ 2.24
TSPAN4-207ENST00000397411 PTGS1P23219 599 aa29.04■■■□□ 2.24
TSPAN4-207ENST00000397411 ACLYP53396 1101 aa29.04■■■□□ 2.24
TSPAN4-207ENST00000397411 IRX5P78411 483 aaPredicted RBP29.04■■■□□ 2.24
TSPAN4-207ENST00000397411 JAKMIP3Q5VZ66 844 aa29.04■■■□□ 2.24
TSPAN4-207ENST00000397411 PCNX4Q63HM2 1172 aa29.04■■■□□ 2.24
TSPAN4-207ENST00000397411 TBC1D32Q96NH3 1257 aa29.04■■■□□ 2.24
TSPAN4-207ENST00000397411 FRMPD4Q14CM0 1322 aa29.03■■■□□ 2.24
TSPAN4-207ENST00000397411 GH1P01241 217 aa29.03■■■□□ 2.24
TSPAN4-207ENST00000397411 ASGR1P07306 291 aa29.03■■■□□ 2.24
TSPAN4-207ENST00000397411 XBP1P17861 261 aa29.03■■■□□ 2.24
TSPAN4-207ENST00000397411 CST5P28325 142 aaPredicted RBP29.03■■■□□ 2.24
TSPAN4-207ENST00000397411 MCTP2Q6DN12 878 aa29.03■■■□□ 2.24
TSPAN4-207ENST00000397411 NLRX1Q86UT6 975 aa29.03■■■□□ 2.24
TSPAN4-207ENST00000397411 WASF1Q92558 559 aa29.03■■■□□ 2.24
TSPAN4-207ENST00000397411 COPS5Q92905 334 aa29.03■■■□□ 2.24
TSPAN4-207ENST00000397411 TMEM260Q9NX78 707 aa29.03■■■□□ 2.24
TSPAN4-207ENST00000397411 ORC3Q9UBD5 711 aaPredicted RBP29.03■■■□□ 2.24
TSPAN4-207ENST00000397411 ARIH2O95376 493 aa29.02■■■□□ 2.24
TSPAN4-207ENST00000397411 CPT1AP50416 773 aa29.02■■■□□ 2.24
TSPAN4-207ENST00000397411 AP3B2Q13367 1082 aa29.02■■■□□ 2.24
TSPAN4-207ENST00000397411 CCDC62Q6P9F0 684 aa29.02■■■□□ 2.24
TSPAN4-207ENST00000397411 IL27Q8NEV9 243 aa29.02■■■□□ 2.24
TSPAN4-207ENST00000397411 PGBD1Q96JS3 809 aa29.02■■■□□ 2.24
TSPAN4-207ENST00000397411 GLT1D1Q96MS3 346 aa29.02■■■□□ 2.24
TSPAN4-207ENST00000397411 ANO3Q9BYT9 981 aa29.02■■■□□ 2.24
TSPAN4-207ENST00000397411 DDX41Q9UJV9 622 aaKnown RBP29.02■■■□□ 2.24
TSPAN4-207ENST00000397411 NR2E3Q9Y5X4 410 aa29.02■■■□□ 2.24
TSPAN4-207ENST00000397411 STK36Q9NRP7 1315 aa29.01■■■□□ 2.23
TSPAN4-207ENST00000397411 TGFB3P10600 412 aa29.01■■■□□ 2.23
TSPAN4-207ENST00000397411 MRPS9P82933 396 aaKnown RBP29.01■■■□□ 2.23
TSPAN4-207ENST00000397411 SLC39A5Q6ZMH5 540 aa29.01■■■□□ 2.23
TSPAN4-207ENST00000397411 DHX37Q8IY37 1157 aaKnown RBP29.01■■■□□ 2.23
TSPAN4-207ENST00000397411 REXO1Q8N1G1 1221 aaKnown RBP29.01■■■□□ 2.23
TSPAN4-207ENST00000397411 STARD7Q9NQZ5 370 aa29.01■■■□□ 2.23
TSPAN4-207ENST00000397411 A0A1W2PQ45 241 aaPredicted RBP29■■■□□ 2.23
TSPAN4-207ENST00000397411 A0A1W2PQY0 241 aa29■■■□□ 2.23
TSPAN4-207ENST00000397411 DTNBO60941 627 aa29■■■□□ 2.23
TSPAN4-207ENST00000397411 RGS20O76081 388 aa29■■■□□ 2.23
TSPAN4-207ENST00000397411 ZNF76P36508 570 aa29■■■□□ 2.23
TSPAN4-207ENST00000397411 NKX3-2P78367 333 aa29■■■□□ 2.23
TSPAN4-207ENST00000397411 MYH7BA7E2Y1 1941 aa29■■■□□ 2.23
TSPAN4-207ENST00000397411 BRCA2P51587 3418 aa29■■■□□ 2.23
TSPAN4-207ENST00000397411 CTAGE5O15320 804 aa28.99■■■□□ 2.23
TSPAN4-207ENST00000397411 CTDNEP1O95476 244 aa28.99■■■□□ 2.23
TSPAN4-207ENST00000397411 MYL3P08590 195 aa28.99■■■□□ 2.23
TSPAN4-207ENST00000397411 LRRC26Q2I0M4 334 aa28.99■■■□□ 2.23
TSPAN4-207ENST00000397411 CCSAPQ6IQ19 270 aaPredicted RBP28.99■■■□□ 2.23
TSPAN4-207ENST00000397411 CCDC83Q8IWF9 413 aa28.99■■■□□ 2.23
TSPAN4-207ENST00000397411 SH2B1Q9NRF2 756 aaPredicted RBP28.99■■■□□ 2.23
TSPAN4-207ENST00000397411 PDE4DIPQ5VU43 2346 aa28.98■■■□□ 2.23
TSPAN4-207ENST00000397411 FIBPO43427 364 aa28.98■■■□□ 2.23
TSPAN4-207ENST00000397411 CLK2P49760 499 aaKnown RBP28.98■■■□□ 2.23
TSPAN4-207ENST00000397411 LAMC2Q13753 1193 aa28.98■■■□□ 2.23
TSPAN4-207ENST00000397411 CXCL17Q6UXB2 119 aa28.98■■■□□ 2.23
TSPAN4-207ENST00000397411 C7orf61Q8IZ16 206 aa28.98■■■□□ 2.23
TSPAN4-207ENST00000397411 AIFM3Q96NN9 605 aa28.98■■■□□ 2.23
TSPAN4-207ENST00000397411 INPP4AQ96PE3 977 aaPredicted RBP28.98■■■□□ 2.23
TSPAN4-207ENST00000397411 MLXIPQ9HAP2 919 aa28.98■■■□□ 2.23
TSPAN4-207ENST00000397411 POLR3EQ9NVU0 708 aa28.98■■■□□ 2.23
TSPAN4-207ENST00000397411 SORBS3O60504 671 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms