RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 ERCC3P19447 782 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 LSP1P33241 339 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 SARNPP82979 210 aaKnown RBP10.13□□□□□ -0.79
CAPN3-206ENST00000397163 HDLBPQ00341 1268 aaKnown RBP10.13□□□□□ -0.79
CAPN3-206ENST00000397163 PAK2Q13177 524 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 SPRED3Q2MJR0 410 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 SLC4A8Q2Y0W8 1093 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 PREPLQ4J6C6 727 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-206ENST00000397163 VWA3BQ502W6 1294 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 TDRD12Q587J7 1177 aaKnown RBP10.13□□□□□ -0.79
CAPN3-206ENST00000397163 ZSCAN29Q8IWY8 852 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-206ENST00000397163 TEX11Q8IYF3 940 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 ZNF34Q8IZ26 560 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 TBC1D31Q96DN5 1066 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 IQCDQ96DY2 449 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 C8orf37Q96NL8 207 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 TRIM6Q9C030 488 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-206ENST00000397163 SLC40A1Q9NP59 571 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 LRRC53A6NM62 1247 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 ERVV-1B6SEH8 477 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 GLI1P08151 1106 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 FAM153BP0C7A2 387 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 SEMA3FQ13275 785 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 FAM153CQ494X1 144 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 GLE1Q53GS7 698 aaKnown RBP10.12□□□□□ -0.79
CAPN3-206ENST00000397163 CACNA2D4Q7Z3S7 1137 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 HEATR3Q7Z4Q2 680 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 SPATS2Q86XZ4 545 aaKnown RBP10.12□□□□□ -0.79
CAPN3-206ENST00000397163 TLR10Q9BXR5 811 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 NDST4Q9H3R1 872 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 SLC39A2Q9NP94 309 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 FAM153AQ9UHL3 310 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 ZSCAN5CA6NGD5 496 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-206ENST00000397163 NR1D1P20393 614 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 HNRNPH3P31942 346 aaKnown RBP10.12□□□□□ -0.79
CAPN3-206ENST00000397163 PPP1R2P41236 205 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 CDR1P51861 262 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 GFPT1Q06210 699 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-206ENST00000397163 CUEDC2Q9H467 287 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 HAUS2Q9NVX0 235 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 BTG4Q9NY30 223 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 SALL4Q9UJQ4 1053 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 COL14A1Q05707 1796 aaKnown RBP10.12□□□□□ -0.79
CAPN3-206ENST00000397163 ZNF233A6NK53 670 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 EIF4E1BA6NMX2 242 aaKnown RBP10.12□□□□□ -0.79
CAPN3-206ENST00000397163 FGRP09769 529 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 CYP2D6P10635 497 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 TNFRSF8P28908 595 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 INHBEP58166 350 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 RNASE9P60153 205 aaKnown RBP10.12□□□□□ -0.79
CAPN3-206ENST00000397163 AMPD3Q01432 767 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 TXNRD1Q16881 649 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 NAA35Q5VZE5 725 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 CNNM4Q6P4Q7 775 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 KDM7AQ6ZMT4 941 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 MAATS1Q7Z4T9 603 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 MTMR8Q96EF0 704 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 TANGO6Q9C0B7 1094 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 EPN3Q9H201 632 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 MAGEF1Q9HAY2 307 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 PCDHA6Q9UN73 950 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.12□□□□□ -0.79
CAPN3-206ENST00000397163 PCDHA8Q9Y5H6 950 aa10.12□□□□□ -0.79
CAPN3-206ENST00000397163 ORC4O43929 436 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 FSBPO95073 299 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 GCKP35557 465 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 SLC1A4P43007 532 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 MAP2K1Q02750 393 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-206ENST00000397163 DDR1Q08345 913 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 KLHDC7AQ5VTJ3 777 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 TMC4Q7Z404 712 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 CCDC84Q86UT8 332 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-206ENST00000397163 IQCKQ8N0W5 287 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 STAG2Q8N3U4 1231 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 CCDC155Q8N6L0 562 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 CCDC114Q96M63 670 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 SLC4A9Q96Q91 983 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 SEMA6BQ9H3T3 888 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 TSKSQ9UJT2 592 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 SIK3Q9Y2K2 1263 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 MYH2Q9UKX2 1941 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 PPP1R37O75864 691 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 GBP2P32456 591 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-206ENST00000397163 LETM2Q2VYF4 491 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 ZNF473Q8WTR7 871 aaKnown RBP10.11□□□□□ -0.79
CAPN3-206ENST00000397163 KRT12Q99456 494 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 C7orf25Q9BPX7 421 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 PPANQ9NQ55 473 aaKnown RBP10.11□□□□□ -0.79
CAPN3-206ENST00000397163 SH3GLB2Q9NR46 395 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 HPDP32754 393 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-206ENST00000397163 MAN2A1Q16706 1144 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 FAM228AQ86W67 206 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 KIAA0895Q8NCT3 520 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 KIF9Q9HAQ2 790 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 GDF3Q9NR23 364 aa10.11□□□□□ -0.79
CAPN3-206ENST00000397163 DUOX1Q9NRD9 1551 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 WTIPA6NIX2 430 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-206ENST00000397163 LAD1O00515 517 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 LCA5LO95447 670 aa10.1□□□□□ -0.79
CAPN3-206ENST00000397163 FTCDO95954 541 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms