RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 CXCL10P02778 98 aa15.91■□□□□ 0.14
SEC13-205ENST00000397101 HSPA4P34932 840 aa15.91■□□□□ 0.14
SEC13-205ENST00000397101 MRPL12P52815 198 aaKnown RBP15.91■□□□□ 0.14
SEC13-205ENST00000397101 SNAP25P60880 206 aa15.91■□□□□ 0.14
SEC13-205ENST00000397101 ERVK-21P61565 698 aa15.91■□□□□ 0.14
SEC13-205ENST00000397101 LEXMQ3ZCV2 418 aa15.91■□□□□ 0.14
SEC13-205ENST00000397101 NOD1Q9Y239 953 aa15.91■□□□□ 0.14
SEC13-205ENST00000397101 ABHD14A-ACY1A0A1B0GW23 586 aa15.9■□□□□ 0.14
SEC13-205ENST00000397101 FOXP2O15409 715 aa15.9■□□□□ 0.14
SEC13-205ENST00000397101 GJB5O95377 273 aa15.9■□□□□ 0.14
SEC13-205ENST00000397101 PDE4DQ08499 809 aa15.9■□□□□ 0.14
SEC13-205ENST00000397101 GPNMBQ14956 572 aa15.9■□□□□ 0.14
SEC13-205ENST00000397101 NECTIN1Q15223 517 aa15.9■□□□□ 0.14
SEC13-205ENST00000397101 CNKSR3Q6P9H4 555 aa15.9■□□□□ 0.14
SEC13-205ENST00000397101 FAM178BQ8IXR5 827 aa15.9■□□□□ 0.14
SEC13-205ENST00000397101 TET1Q8NFU7 2136 aa15.9■□□□□ 0.14
SEC13-205ENST00000397101 CLEC4DQ8WXI8 215 aa15.9■□□□□ 0.14
SEC13-205ENST00000397101 TBC1D32Q96NH3 1257 aa15.9■□□□□ 0.14
SEC13-205ENST00000397101 TGS1Q96RS0 853 aaKnown RBP15.9■□□□□ 0.14
SEC13-205ENST00000397101 RAD9AQ99638 391 aa15.9■□□□□ 0.14
SEC13-205ENST00000397101 UBE2ZQ9H832 354 aaPredicted RBP15.9■□□□□ 0.14
SEC13-205ENST00000397101 CD320Q9NPF0 282 aa15.9■□□□□ 0.14
SEC13-205ENST00000397101 TOMM22Q9NS69 142 aa15.9■□□□□ 0.14
SEC13-205ENST00000397101 ANAPC4Q9UJX5 808 aa15.9■□□□□ 0.14
SEC13-205ENST00000397101 WDR19Q8NEZ3 1342 aa15.9■□□□□ 0.14
SEC13-205ENST00000397101 PTPDC1A2A3K4 754 aa15.89■□□□□ 0.13
SEC13-205ENST00000397101 LCHNA4D1U4 455 aa15.89■□□□□ 0.13
SEC13-205ENST00000397101 FGRP09769 529 aa15.89■□□□□ 0.13
SEC13-205ENST00000397101 SELPP16109 830 aa15.89■□□□□ 0.13
SEC13-205ENST00000397101 CTDSPL2Q05D32 466 aa15.89■□□□□ 0.13
SEC13-205ENST00000397101 PTGISQ16647 500 aa15.89■□□□□ 0.13
SEC13-205ENST00000397101 SYDE2Q5VT97 1194 aa15.89■□□□□ 0.13
SEC13-205ENST00000397101 RNF207Q6ZRF8 634 aa15.89■□□□□ 0.13
SEC13-205ENST00000397101 GJD3Q8N144 294 aa15.89■□□□□ 0.13
SEC13-205ENST00000397101 RGS22Q8NE09 1264 aa15.89■□□□□ 0.13
SEC13-205ENST00000397101 CTAGE1Q96RT6 745 aa15.89■□□□□ 0.13
SEC13-205ENST00000397101 KCNH6Q9H252 994 aa15.89■□□□□ 0.13
SEC13-205ENST00000397101 SUGCTQ9HAC7 445 aa15.89■□□□□ 0.13
SEC13-205ENST00000397101 ZMYM6O95789 1325 aa15.89■□□□□ 0.13
SEC13-205ENST00000397101 MUC6Q6W4X9 2439 aa15.88■□□□□ 0.13
SEC13-205ENST00000397101 ORC4O43929 436 aa15.88■□□□□ 0.13
SEC13-205ENST00000397101 CYP21A2P08686 494 aa15.88■□□□□ 0.13
SEC13-205ENST00000397101 TXNP10599 105 aaKnown RBP15.88■□□□□ 0.13
SEC13-205ENST00000397101 ALADP13716 330 aa15.88■□□□□ 0.13
SEC13-205ENST00000397101 RBM25P49756 843 aaKnown RBP15.88■□□□□ 0.13
SEC13-205ENST00000397101 RPS6P62753 249 aaKnown RBP15.88■□□□□ 0.13
SEC13-205ENST00000397101 TRDNQ13061 729 aa15.88■□□□□ 0.13
SEC13-205ENST00000397101 KRT32Q14532 448 aa15.88■□□□□ 0.13
SEC13-205ENST00000397101 CCDC96Q2M329 555 aa15.88■□□□□ 0.13
SEC13-205ENST00000397101 PUS10Q3MIT2 529 aaKnown RBP15.88■□□□□ 0.13
SEC13-205ENST00000397101 SLC30A10Q6XR72 485 aa15.88■□□□□ 0.13
SEC13-205ENST00000397101 LRRC8DQ7L1W4 858 aa15.88■□□□□ 0.13
SEC13-205ENST00000397101 SPRED2Q7Z698 418 aa15.88■□□□□ 0.13
SEC13-205ENST00000397101 GDPD5Q8WTR4 605 aa15.88■□□□□ 0.13
SEC13-205ENST00000397101 ZBED2Q9BTP6 218 aa15.88■□□□□ 0.13
SEC13-205ENST00000397101 TCP11L1Q9NUJ3 509 aa15.88■□□□□ 0.13
SEC13-205ENST00000397101 SNX14Q9Y5W7 946 aa15.88■□□□□ 0.13
SEC13-205ENST00000397101 COL4A4P53420 1690 aaPredicted RBP15.88■□□□□ 0.13
SEC13-205ENST00000397101 WDFY4Q6ZS81 3184 aa15.88■□□□□ 0.13
SEC13-205ENST00000397101 BRWD1Q9NSI6 2320 aa15.88■□□□□ 0.13
SEC13-205ENST00000397101 FAM86C2PA6NEL3 165 aa15.87■□□□□ 0.13
SEC13-205ENST00000397101 NMT2O60551 498 aa15.87■□□□□ 0.13
SEC13-205ENST00000397101 CALML3P27482 149 aa15.87■□□□□ 0.13
SEC13-205ENST00000397101 PSMA5P28066 241 aa15.87■□□□□ 0.13
SEC13-205ENST00000397101 ANAPC15P60006 121 aa15.87■□□□□ 0.13
SEC13-205ENST00000397101 RRP12Q5JTH9 1297 aaKnown RBP15.87■□□□□ 0.13
SEC13-205ENST00000397101 TTBK2Q6IQ55 1244 aa15.87■□□□□ 0.13
SEC13-205ENST00000397101 CCDC62Q6P9F0 684 aa15.87■□□□□ 0.13
SEC13-205ENST00000397101 MFSD6Q6ZSS7 791 aa15.87■□□□□ 0.13
SEC13-205ENST00000397101 RASGRP2Q7LDG7 609 aa15.87■□□□□ 0.13
SEC13-205ENST00000397101 RALYLQ86SE5 291 aaKnown RBP15.87■□□□□ 0.13
SEC13-205ENST00000397101 COPS5Q92905 334 aa15.87■□□□□ 0.13
SEC13-205ENST00000397101 JAKMIP1Q96N16 626 aaKnown RBP15.87■□□□□ 0.13
SEC13-205ENST00000397101 RNF41Q9H4P4 317 aaPredicted RBP15.87■□□□□ 0.13
SEC13-205ENST00000397101 PTPRSQ13332 1948 aa15.86■□□□□ 0.13
SEC13-205ENST00000397101 LINC01553A4QN01 128 aa15.86■□□□□ 0.13
SEC13-205ENST00000397101 TOP1P11387 765 aaKnown RBP15.86■□□□□ 0.13
SEC13-205ENST00000397101 DEFB103AP81534 67 aa15.86■□□□□ 0.13
SEC13-205ENST00000397101 GDF6Q6KF10 455 aaPredicted RBP15.86■□□□□ 0.13
SEC13-205ENST00000397101 RASEFQ8IZ41 740 aa15.86■□□□□ 0.13
SEC13-205ENST00000397101 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.86■□□□□ 0.13
SEC13-205ENST00000397101 CHMP4CQ96CF2 233 aa15.86■□□□□ 0.13
SEC13-205ENST00000397101 GTF2IRD1Q9UHL9 959 aa15.86■□□□□ 0.13
SEC13-205ENST00000397101 E7EWF7 191 aa15.85■□□□□ 0.13
SEC13-205ENST00000397101 RANBP6O60518 1105 aaKnown RBP15.85■□□□□ 0.13
SEC13-205ENST00000397101 NBNO60934 754 aa15.85■□□□□ 0.13
SEC13-205ENST00000397101 ARIH2O95376 493 aa15.85■□□□□ 0.13
SEC13-205ENST00000397101 MMP3P08254 477 aa15.85■□□□□ 0.13
SEC13-205ENST00000397101 CKBP12277 381 aa15.85■□□□□ 0.13
SEC13-205ENST00000397101 CASTP20810 708 aaKnown RBP15.85■□□□□ 0.13
SEC13-205ENST00000397101 SLC16A2P36021 539 aa15.85■□□□□ 0.13
SEC13-205ENST00000397101 IKBKEQ14164 716 aa15.85■□□□□ 0.13
SEC13-205ENST00000397101 ALYREFQ86V81 257 aaKnown RBP15.85■□□□□ 0.13
SEC13-205ENST00000397101 NEK9Q8TD19 979 aa15.85■□□□□ 0.13
SEC13-205ENST00000397101 DHX38Q92620 1227 aaKnown RBP15.85■□□□□ 0.13
SEC13-205ENST00000397101 KAT2BQ92831 832 aa15.85■□□□□ 0.13
SEC13-205ENST00000397101 NEK1Q96PY6 1258 aa15.85■□□□□ 0.13
SEC13-205ENST00000397101 GRXCR2A6NFK2 248 aa15.84■□□□□ 0.13
SEC13-205ENST00000397101 GH1P01241 217 aa15.84■□□□□ 0.13
SEC13-205ENST00000397101 SNHG28P0DPA3 235 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms