RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 XAB2Q9HCS7 855 aaKnown RBP7.81□□□□□ -1.16
UPF2-203ENST00000397053 SBNO1A3KN83 1393 aa7.81□□□□□ -1.16
UPF2-203ENST00000397053 SYNDIG1LA6NDD5 238 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 GSTA4O15217 222 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 MED7O43513 233 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 TTLL1O95922 423 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 ATP5JP18859 108 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 GUCY2FP51841 1108 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 ASPRV1Q53RT3 343 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 TWF2Q6IBS0 349 aaKnown RBP7.8□□□□□ -1.16
UPF2-203ENST00000397053 SPOPLQ6IQ16 392 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 CC2D1AQ6P1N0 951 aaPredicted RBP7.8□□□□□ -1.16
UPF2-203ENST00000397053 NOSTRINQ8IVI9 506 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 PGBD3Q8N328 593 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 ARHGEF1Q92888 912 aaKnown RBP7.8□□□□□ -1.16
UPF2-203ENST00000397053 TRIM11Q96F44 468 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 TSPYL2Q9H2G4 693 aaPredicted RBP7.8□□□□□ -1.16
UPF2-203ENST00000397053 DHX36Q9H2U1 1008 aaKnown RBP7.8□□□□□ -1.16
UPF2-203ENST00000397053 Q9H521 79 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 ZBTB40Q9NUA8 1239 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 PIM2Q9P1W9 311 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 FAN1Q9Y2M0 1017 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 SAR1BQ9Y6B6 198 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 CHEK2O96017 543 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 MYL7Q01449 175 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 TAF11Q15544 211 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 CXorf38Q8TB03 319 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 PDCD6IPQ8WUM4 868 aaKnown RBP7.8□□□□□ -1.16
UPF2-203ENST00000397053 TOPORSQ9NS56 1045 aaPredicted RBP7.8□□□□□ -1.16
UPF2-203ENST00000397053 BAIAP2L1Q9UHR4 511 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 URB2Q14146 1524 aaKnown RBP7.8□□□□□ -1.16
UPF2-203ENST00000397053 A2MP01023 1474 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 UBN2Q6ZU65 1347 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 PASKQ96RG2 1323 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 KCNJ18B7U540 433 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 POC1B-GALNT4F8VUJ3 575 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 MCF2LO15068 1137 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 PYGLP06737 847 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 NPR1P16066 1061 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 ARHGAP25P42331 645 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 STAT2P52630 851 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 RAD51Q06609 339 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 KCNJ12Q14500 433 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 DNAJC24Q6P3W2 148 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 OR6B3Q8NGW1 331 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 ACCSQ96QU6 501 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 RPF1Q9H9Y2 349 aaKnown RBP7.8□□□□□ -1.16
UPF2-203ENST00000397053 STK38LQ9Y2H1 464 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 SNX14Q9Y5W7 946 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 PCCAP05165 728 aaPredicted RBP7.8□□□□□ -1.16
UPF2-203ENST00000397053 MARK3P27448 753 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 ABCD1P33897 745 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 CRKLP46109 303 aaKnown RBP7.8□□□□□ -1.16
UPF2-203ENST00000397053 PDCD2Q16342 344 aaPredicted RBP7.8□□□□□ -1.16
UPF2-203ENST00000397053 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.8□□□□□ -1.16
UPF2-203ENST00000397053 FIS1Q9Y3D6 152 aa7.8□□□□□ -1.16
UPF2-203ENST00000397053 NEURL1BA8MQ27 555 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 EIF3CLB5ME19 914 aaKnown RBP7.79□□□□□ -1.16
UPF2-203ENST00000397053 DNAJC8O75937 253 aaPredicted RBP7.79□□□□□ -1.16
UPF2-203ENST00000397053 SERPINB6P35237 376 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 NAA35Q5VZE5 725 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 RWDD4Q6NW29 188 aaKnown RBP7.79□□□□□ -1.16
UPF2-203ENST00000397053 KCTD1Q719H9 257 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 FAM81BQ96LP2 452 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 EIF3CQ99613 913 aaKnown RBP7.79□□□□□ -1.16
UPF2-203ENST00000397053 HYOU1Q9Y4L1 999 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 K7ERI5 159 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 PRPSAP2O60256 369 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 PSAPP07602 524 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 MMP10P09238 476 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 CD58P19256 250 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 EIF2AK2P19525 551 aaKnown RBP7.79□□□□□ -1.16
UPF2-203ENST00000397053 ADD1P35611 737 aaKnown RBP7.79□□□□□ -1.16
UPF2-203ENST00000397053 SURF1Q15526 300 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 POTEDQ86YR6 584 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 FBXL13Q8NEE6 735 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 LRRC8CQ8TDW0 803 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 SNX19Q92543 992 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 TSC1Q92574 1164 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 CCDC51Q96ER9 411 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 GDAP1L1Q96MZ0 367 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 DYRK4Q9NR20 520 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 PI4KBQ9UBF8 816 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 HPCAL4Q9UM19 191 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 KCNH4Q9UQ05 1017 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 SUPT6HQ7KZ85 1726 aaKnown RBP7.79□□□□□ -1.16
UPF2-203ENST00000397053 KIF28PB7ZC32 967 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 BUB1O43683 1085 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 JAK2O60674 1132 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 GAP43P17677 238 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 NR2F2P24468 414 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 MAPK4P31152 587 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 TSPY1Q01534 308 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 PPP1R2P3Q6NXS1 205 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 PDCD7Q8N8D1 485 aaKnown RBP7.79□□□□□ -1.16
UPF2-203ENST00000397053 SEPT8Q92599 483 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 SH3KBP1Q96B97 665 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 EDC3Q96F86 508 aaKnown RBP7.79□□□□□ -1.16
UPF2-203ENST00000397053 CCDC138Q96M89 665 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 HEXIM2Q96MH2 286 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms