RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 GOLGA5Q8TBA6 731 aa17.64■□□□□ 0.41
ATP2A3-206ENST00000397043 TSG101Q99816 390 aa17.64■□□□□ 0.41
ATP2A3-206ENST00000397043 TTYH3Q9C0H2 523 aa17.64■□□□□ 0.41
ATP2A3-206ENST00000397043 TRIM66O15016 1216 aa17.64■□□□□ 0.41
ATP2A3-206ENST00000397043 TUBBP07437 444 aa17.64■□□□□ 0.41
ATP2A3-206ENST00000397043 PAPD7Q5XG87 772 aaKnown RBP17.64■□□□□ 0.41
ATP2A3-206ENST00000397043 C16orf86Q6ZW13 317 aa17.64■□□□□ 0.41
ATP2A3-206ENST00000397043 ALS2CR12Q96Q35 445 aa17.64■□□□□ 0.41
ATP2A3-206ENST00000397043 BLOC1S4Q9NUP1 217 aa17.64■□□□□ 0.41
ATP2A3-206ENST00000397043 LCMT1Q9UIC8 334 aa17.64■□□□□ 0.41
ATP2A3-206ENST00000397043 CNTNAP4Q9C0A0 1308 aa17.64■□□□□ 0.41
ATP2A3-206ENST00000397043 PDHBP11177 359 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 GGCXP38435 758 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 PPARDQ03181 441 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 SELENOOQ9BVL4 669 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 MAGEF1Q9HAY2 307 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 AKR1B1P15121 316 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 MCM3P25205 808 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 SCNN1DP51172 638 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 IQCEQ6IPM2 695 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 WDR93Q6P2C0 686 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 TRIM58Q8NG06 486 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 LRRC1Q9BTT6 524 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 POLD4Q9HCU8 107 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 PPP4CP60510 307 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 MAN2A1Q16706 1144 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 UNC13DQ70J99 1090 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 PNMA5Q96PV4 448 aa17.63■□□□□ 0.41
ATP2A3-206ENST00000397043 AFAP1L1Q8TED9 768 aa17.62■□□□□ 0.41
ATP2A3-206ENST00000397043 TSGA10Q9BZW7 698 aa17.62■□□□□ 0.41
ATP2A3-206ENST00000397043 BMP2KQ9NSY1 1161 aaPredicted RBP17.62■□□□□ 0.41
ATP2A3-206ENST00000397043 TTC19Q6DKK2 380 aaPredicted RBP17.62■□□□□ 0.41
ATP2A3-206ENST00000397043 BARGINQ6ZT62 677 aa17.62■□□□□ 0.41
ATP2A3-206ENST00000397043 ERGIC2Q96RQ1 377 aa17.62■□□□□ 0.41
ATP2A3-206ENST00000397043 MXD3Q9BW11 206 aa17.62■□□□□ 0.41
ATP2A3-206ENST00000397043 DDX25Q9UHL0 483 aaKnown RBP17.62■□□□□ 0.41
ATP2A3-206ENST00000397043 JRKLQ9Y4A0 524 aa17.62■□□□□ 0.41
ATP2A3-206ENST00000397043 NPHP3-ACAD11A0A0J9YXS1 232 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 G3V3G9 751 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 FGFR1OPO95684 399 aaKnown RBP17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 PAFAH1B1P43034 410 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 POLR2FP61218 127 aaKnown RBP17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 DCAF8Q5TAQ9 597 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 CENPPQ6IPU0 288 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 STRCQ7RTU9 1775 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 CCDC84Q86UT8 332 aaPredicted RBP17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 MS4A14Q96JA4 679 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 DMGDHQ9UI17 866 aaKnown RBP17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 PLAGL2Q9UPG8 496 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 GOLGA6BA6NDN3 693 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 PLCG2P16885 1265 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 RAPGEF1Q13905 1077 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 KCTD19Q17RG1 926 aaPredicted RBP17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 HERC4Q5GLZ8 1057 aaPredicted RBP17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 MED4Q9NPJ6 270 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 HPCAL4Q9UM19 191 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 SNX12Q9UMY4 172 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 PCDHA12Q9UN75 941 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 KIAA1024Q9UPX6 916 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 SRCAPQ6ZRS2 3230 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 FAM196BA6NMK8 535 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 E9PMD0 336 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 SLC1A4P43007 532 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 IKQ13123 557 aaPredicted RBP17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 MYOCDQ8IZQ8 938 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 RUFY1Q96T51 708 aa17.61■□□□□ 0.41
ATP2A3-206ENST00000397043 USP17L15C9J2P7 530 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 USP17L13C9JLJ4 530 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 USP17L11C9JVI0 530 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 USP17L18D6R9N7 530 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 USP17L22D6RA61 530 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 USP17L17D6RBQ6 530 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 USP17L19D6RCP7 530 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 USP17L20D6RJB6 530 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 USP17L24Q0WX57 530 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 USP17L6PQ6QN14 398 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 RAD54LQ92698 747 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 PANK4Q9NVE7 773 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 PACSIN2Q9UNF0 486 aaPredicted RBP17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 MYH10P35580 1976 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 GPR75-ASB3A0A0A6YYF3 556 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 PPP1R2P41236 205 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 ECM1Q16610 540 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 IFT81Q8WYA0 676 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 LSM14BQ9BX40 385 aaKnown RBP17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 SH2D4AQ9H788 454 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 MTMR4Q9NYA4 1195 aa17.6■□□□□ 0.41
ATP2A3-206ENST00000397043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.59■□□□□ 0.41
ATP2A3-206ENST00000397043 FTCDO95954 541 aa17.59■□□□□ 0.41
ATP2A3-206ENST00000397043 SAMD1Q6SPF0 538 aaPredicted RBP17.59■□□□□ 0.41
ATP2A3-206ENST00000397043 ADGRF4Q8IZF3 695 aa17.59■□□□□ 0.41
ATP2A3-206ENST00000397043 SPATA4Q8NEY3 305 aa17.59■□□□□ 0.41
ATP2A3-206ENST00000397043 RPGRIP1Q96KN7 1286 aa17.59■□□□□ 0.41
ATP2A3-206ENST00000397043 OSBPL9Q96SU4 736 aa17.59■□□□□ 0.41
ATP2A3-206ENST00000397043 EP400Q96L91 3159 aa17.59■□□□□ 0.41
ATP2A3-206ENST00000397043 USP17L10C9JJH3 530 aa17.59■□□□□ 0.41
ATP2A3-206ENST00000397043 SNAP25P60880 206 aa17.59■□□□□ 0.41
ATP2A3-206ENST00000397043 FAM26FQ5R3K3 315 aa17.59■□□□□ 0.41
ATP2A3-206ENST00000397043 PRR5LQ6MZQ0 368 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms