RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 MMP3P08254 477 aa21.86■■□□□ 1.09
MCF2L-207ENST00000397024 NFRKBQ6P4R8 1299 aa21.86■■□□□ 1.09
MCF2L-207ENST00000397024 IL31RAQ8NI17 732 aa21.86■■□□□ 1.09
MCF2L-207ENST00000397024 PIBF1Q8WXW3 757 aa21.86■■□□□ 1.09
MCF2L-207ENST00000397024 KAT2BQ92831 832 aa21.86■■□□□ 1.09
MCF2L-207ENST00000397024 ZFP91Q96JP5 570 aaPredicted RBP21.86■■□□□ 1.09
MCF2L-207ENST00000397024 PDCD2LQ9BRP1 358 aa21.86■■□□□ 1.09
MCF2L-207ENST00000397024 MAP3K20Q9NYL2 800 aaKnown RBP21.86■■□□□ 1.09
MCF2L-207ENST00000397024 PRC1O43663 620 aa21.85■■□□□ 1.09
MCF2L-207ENST00000397024 SUPT20HL2P0C7V6 817 aa21.85■■□□□ 1.09
MCF2L-207ENST00000397024 MYCLP12524 364 aaPredicted RBP21.85■■□□□ 1.09
MCF2L-207ENST00000397024 CHMP4BP1P59074 171 aa21.85■■□□□ 1.09
MCF2L-207ENST00000397024 GRIN2CQ14957 1233 aa21.85■■□□□ 1.09
MCF2L-207ENST00000397024 NECTIN1Q15223 517 aa21.85■■□□□ 1.09
MCF2L-207ENST00000397024 OTOP2Q7RTS6 562 aa21.85■■□□□ 1.09
MCF2L-207ENST00000397024 VSIG10LQ86VR7 867 aa21.85■■□□□ 1.09
MCF2L-207ENST00000397024 CUL9Q8IWT3 2517 aa21.84■■□□□ 1.09
MCF2L-207ENST00000397024 GCOM1H8Y6P7 765 aaPredicted RBP21.84■■□□□ 1.09
MCF2L-207ENST00000397024 POLR2MP0CAP2 368 aa21.84■■□□□ 1.09
MCF2L-207ENST00000397024 PGM5Q15124 567 aa21.84■■□□□ 1.09
MCF2L-207ENST00000397024 CREB3L3Q68CJ9 461 aa21.84■■□□□ 1.09
MCF2L-207ENST00000397024 FCHSD1Q86WN1 690 aa21.84■■□□□ 1.09
MCF2L-207ENST00000397024 ZNF654Q8IZM8 581 aa21.84■■□□□ 1.09
MCF2L-207ENST00000397024 PBX4Q9BYU1 374 aa21.84■■□□□ 1.09
MCF2L-207ENST00000397024 CHD7Q9P2D1 2997 aa21.84■■□□□ 1.09
MCF2L-207ENST00000397024 MYH7BA7E2Y1 1941 aa21.84■■□□□ 1.09
MCF2L-207ENST00000397024 MYO9BQ13459 2157 aa21.83■■□□□ 1.09
MCF2L-207ENST00000397024 TMEM265A0A087WTH1 108 aa21.83■■□□□ 1.09
MCF2L-207ENST00000397024 SP2Q02086 613 aa21.83■■□□□ 1.09
MCF2L-207ENST00000397024 SAMD3Q8N6K7 520 aa21.83■■□□□ 1.09
MCF2L-207ENST00000397024 GPKOWQ92917 476 aaPredicted RBP eCLIP21.83■■□□□ 1.09
MCF2L-207ENST00000397024 TIFAQ96CG3 184 aa21.83■■□□□ 1.09
MCF2L-207ENST00000397024 CTAGE1Q96RT6 745 aa21.83■■□□□ 1.09
MCF2L-207ENST00000397024 MRVI1Q9Y6F6 885 aa21.83■■□□□ 1.09
MCF2L-207ENST00000397024 SCN5AQ14524 2016 aa21.82■■□□□ 1.08
MCF2L-207ENST00000397024 SH2B2O14492 632 aaPredicted RBP21.82■■□□□ 1.08
MCF2L-207ENST00000397024 SORBS3O60504 671 aa21.82■■□□□ 1.08
MCF2L-207ENST00000397024 PTPN11Q06124 597 aaPredicted RBP21.82■■□□□ 1.08
MCF2L-207ENST00000397024 RPUSD2Q8IZ73 545 aaKnown RBP21.82■■□□□ 1.08
MCF2L-207ENST00000397024 EMID1Q96A84 441 aaPredicted RBP21.82■■□□□ 1.08
MCF2L-207ENST00000397024 MAP3K14Q99558 947 aa21.82■■□□□ 1.08
MCF2L-207ENST00000397024 ZNF576Q9H609 170 aa21.82■■□□□ 1.08
MCF2L-207ENST00000397024 BCAS3Q9H6U6 928 aa21.82■■□□□ 1.08
MCF2L-207ENST00000397024 DLL1O00548 723 aa21.81■■□□□ 1.08
MCF2L-207ENST00000397024 PLEKHA8P1O95397 391 aa21.81■■□□□ 1.08
MCF2L-207ENST00000397024 CASTP20810 708 aaKnown RBP21.81■■□□□ 1.08
MCF2L-207ENST00000397024 MCM5P33992 734 aa21.81■■□□□ 1.08
MCF2L-207ENST00000397024 TRAF1Q13077 416 aa21.81■■□□□ 1.08
MCF2L-207ENST00000397024 LAMC2Q13753 1193 aa21.81■■□□□ 1.08
MCF2L-207ENST00000397024 DGKDQ16760 1214 aa21.81■■□□□ 1.08
MCF2L-207ENST00000397024 BMP2KLQ5H9B9 411 aa21.81■■□□□ 1.08
MCF2L-207ENST00000397024 GDF6Q6KF10 455 aaPredicted RBP21.81■■□□□ 1.08
MCF2L-207ENST00000397024 CASC1Q6TDU7 716 aa21.81■■□□□ 1.08
MCF2L-207ENST00000397024 CENPQQ7L2Z9 268 aaPredicted RBP21.81■■□□□ 1.08
MCF2L-207ENST00000397024 DEFB128Q7Z7B8 93 aa21.81■■□□□ 1.08
MCF2L-207ENST00000397024 DHX37Q8IY37 1157 aaKnown RBP21.81■■□□□ 1.08
MCF2L-207ENST00000397024 CMTR1Q8N1G2 835 aaKnown RBP21.81■■□□□ 1.08
MCF2L-207ENST00000397024 SRBD1Q8N5C6 995 aaKnown RBP21.81■■□□□ 1.08
MCF2L-207ENST00000397024 SPZ1Q9BXG8 430 aa21.81■■□□□ 1.08
MCF2L-207ENST00000397024 LRRC2Q9BYS8 371 aa21.81■■□□□ 1.08
MCF2L-207ENST00000397024 ANO2Q9NQ90 1003 aa21.81■■□□□ 1.08
MCF2L-207ENST00000397024 TRIP12Q14669 1992 aaPredicted RBP21.8■■□□□ 1.08
MCF2L-207ENST00000397024 RBAK-RBAKDNI3L0D1 243 aa21.8■■□□□ 1.08
MCF2L-207ENST00000397024 DDAH1O94760 285 aa21.8■■□□□ 1.08
MCF2L-207ENST00000397024 RXRAP19793 462 aa21.8■■□□□ 1.08
MCF2L-207ENST00000397024 PTGISQ16647 500 aa21.8■■□□□ 1.08
MCF2L-207ENST00000397024 MYSM1Q5VVJ2 828 aa21.8■■□□□ 1.08
MCF2L-207ENST00000397024 RAB11FIP4Q86YS3 637 aa21.8■■□□□ 1.08
MCF2L-207ENST00000397024 MAFAQ8NHW3 353 aaPredicted RBP21.8■■□□□ 1.08
MCF2L-207ENST00000397024 MTA3Q9BTC8 594 aa21.8■■□□□ 1.08
MCF2L-207ENST00000397024 VCANP13611 3396 aa21.79■■□□□ 1.08
MCF2L-207ENST00000397024 CCND2P30279 289 aa21.79■■□□□ 1.08
MCF2L-207ENST00000397024 MRPS9P82933 396 aaKnown RBP21.79■■□□□ 1.08
MCF2L-207ENST00000397024 CELF3Q5SZQ8 465 aaKnown RBP21.79■■□□□ 1.08
MCF2L-207ENST00000397024 NFXL1Q6ZNB6 911 aa21.79■■□□□ 1.08
MCF2L-207ENST00000397024 TMTC2Q8N394 836 aa21.79■■□□□ 1.08
MCF2L-207ENST00000397024 PPTC7Q8NI37 304 aa21.79■■□□□ 1.08
MCF2L-207ENST00000397024 CTCFLQ8NI51 663 aaPredicted RBP21.79■■□□□ 1.08
MCF2L-207ENST00000397024 TMEM87BQ96K49 555 aa21.79■■□□□ 1.08
MCF2L-207ENST00000397024 YBX2Q9Y2T7 364 aaKnown RBP21.79■■□□□ 1.08
MCF2L-207ENST00000397024 TET1Q8NFU7 2136 aa21.79■■□□□ 1.08
MCF2L-207ENST00000397024 GGPS1O95749 300 aa21.78■■□□□ 1.08
MCF2L-207ENST00000397024 IQCF3P0C7M6 154 aa21.78■■□□□ 1.08
MCF2L-207ENST00000397024 ZNF286BP0CG31 522 aa21.78■■□□□ 1.08
MCF2L-207ENST00000397024 HOXD8P13378 290 aaPredicted RBP21.78■■□□□ 1.08
MCF2L-207ENST00000397024 FOSL2P15408 326 aa21.78■■□□□ 1.08
MCF2L-207ENST00000397024 SMARCA1P28370 1054 aa21.78■■□□□ 1.08
MCF2L-207ENST00000397024 KIF5BP33176 963 aa21.78■■□□□ 1.08
MCF2L-207ENST00000397024 PSEN2P49810 448 aa21.78■■□□□ 1.08
MCF2L-207ENST00000397024 RABGGTBP53611 331 aa21.78■■□□□ 1.08
MCF2L-207ENST00000397024 HSDL1Q3SXM5 330 aa21.78■■□□□ 1.08
MCF2L-207ENST00000397024 USP17L6PQ6QN14 398 aa21.78■■□□□ 1.08
MCF2L-207ENST00000397024 SESTD1Q86VW0 696 aa21.78■■□□□ 1.08
MCF2L-207ENST00000397024 DHX38Q92620 1227 aaKnown RBP21.78■■□□□ 1.08
MCF2L-207ENST00000397024 RRP36Q96EU6 259 aaKnown RBP21.78■■□□□ 1.08
MCF2L-207ENST00000397024 ALG1Q9BT22 464 aa21.78■■□□□ 1.08
MCF2L-207ENST00000397024 HDAC6Q9UBN7 1215 aa21.78■■□□□ 1.08
MCF2L-207ENST00000397024 SLC4A7Q9Y6M7 1214 aa21.78■■□□□ 1.08
MCF2L-207ENST00000397024 GBF1Q92538 1859 aa21.77■■□□□ 1.08
MCF2L-207ENST00000397024 CCDC69A6NI79 296 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms