RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.15□□□□□ -0.46
NUP98-205ENST00000397007 FGD1P98174 961 aa12.15□□□□□ -0.47
NUP98-205ENST00000397007 PKP1Q13835 747 aa12.15□□□□□ -0.47
NUP98-205ENST00000397007 C6orf50Q9HD87 102 aa12.15□□□□□ -0.47
NUP98-205ENST00000397007 OGDHLQ9ULD0 1010 aa12.15□□□□□ -0.47
NUP98-205ENST00000397007 ASB14A6NK59 587 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 PDIA4P13667 645 aaKnown RBP12.14□□□□□ -0.47
NUP98-205ENST00000397007 MRPL12P52815 198 aaKnown RBP12.14□□□□□ -0.47
NUP98-205ENST00000397007 REXO1Q8N1G1 1221 aaKnown RBP12.14□□□□□ -0.47
NUP98-205ENST00000397007 HAS1Q92839 578 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 CWC22Q9HCG8 908 aaKnown RBP12.14□□□□□ -0.47
NUP98-205ENST00000397007 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.14□□□□□ -0.47
NUP98-205ENST00000397007 RBM19Q9Y4C8 960 aaKnown RBP12.14□□□□□ -0.47
NUP98-205ENST00000397007 BTBD18B2RXH4 712 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 PPFIA3O75145 1194 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 EIF3JO75822 258 aaKnown RBP12.14□□□□□ -0.47
NUP98-205ENST00000397007 NR3C2P08235 984 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 CPLX2Q6PUV4 134 aaKnown RBP12.14□□□□□ -0.47
NUP98-205ENST00000397007 NOL8Q76FK4 1167 aaKnown RBP12.14□□□□□ -0.47
NUP98-205ENST00000397007 SLC5A5Q92911 643 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 GPRASP2Q96D09 838 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 HOMER2Q9NSB8 354 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 DDX41Q9UJV9 622 aaKnown RBP12.14□□□□□ -0.47
NUP98-205ENST00000397007 RAD21O60216 631 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 COL6A1P12109 1028 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 HOXD10P28358 340 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 TRAPPC10P48553 1259 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 PLS1Q14651 629 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 PTPAQ15257 358 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 RMDN3Q96TC7 470 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 MXRA8Q9BRK3 442 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 ABHD16BQ9H3Z7 469 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.14□□□□□ -0.47
NUP98-205ENST00000397007 VAV3Q9UKW4 847 aa12.14□□□□□ -0.47
NUP98-205ENST00000397007 CPLX1O14810 134 aa12.13□□□□□ -0.47
NUP98-205ENST00000397007 KRT2P35908 639 aa12.13□□□□□ -0.47
NUP98-205ENST00000397007 ARHGAP4P98171 946 aa12.13□□□□□ -0.47
NUP98-205ENST00000397007 ARHGAP1Q07960 439 aa12.13□□□□□ -0.47
NUP98-205ENST00000397007 NOSTRINQ8IVI9 506 aa12.13□□□□□ -0.47
NUP98-205ENST00000397007 DIS3L2Q8IYB7 885 aaKnown RBP12.13□□□□□ -0.47
NUP98-205ENST00000397007 ANKRD35Q8N283 1001 aa12.13□□□□□ -0.47
NUP98-205ENST00000397007 RASGRP4Q8TDF6 673 aa12.13□□□□□ -0.47
NUP98-205ENST00000397007 DDX11Q96FC9 970 aa12.13□□□□□ -0.47
NUP98-205ENST00000397007 MCOLN1Q9GZU1 580 aa12.13□□□□□ -0.47
NUP98-205ENST00000397007 POTEB2H3BUK9 544 aa12.13□□□□□ -0.47
NUP98-205ENST00000397007 ADCY3O60266 1144 aa12.13□□□□□ -0.47
NUP98-205ENST00000397007 IKQ13123 557 aaPredicted RBP12.13□□□□□ -0.47
NUP98-205ENST00000397007 ITGB3BPQ13352 177 aaPredicted RBP12.13□□□□□ -0.47
NUP98-205ENST00000397007 ADD3Q9UEY8 706 aaKnown RBP12.13□□□□□ -0.47
NUP98-205ENST00000397007 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.13□□□□□ -0.47
NUP98-205ENST00000397007 CCND3P30281 292 aaPredicted RBP12.13□□□□□ -0.47
NUP98-205ENST00000397007 GJA9P57773 515 aa12.13□□□□□ -0.47
NUP98-205ENST00000397007 IL17AQ16552 155 aa12.13□□□□□ -0.47
NUP98-205ENST00000397007 KRT25Q7Z3Z0 450 aa12.13□□□□□ -0.47
NUP98-205ENST00000397007 TRIM17Q9Y577 477 aa12.13□□□□□ -0.47
NUP98-205ENST00000397007 MAFGO15525 162 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 PSMD10O75832 226 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 INHAP05111 366 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 TGFB3P10600 412 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 SMPD1P17405 629 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 GRK4P32298 578 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 ACVR2BQ13705 512 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 KIF22Q14807 665 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 SLC43A3Q8NBI5 491 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 CYP2W1Q8TAV3 490 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 AGO4Q9HCK5 861 aaKnown RBP12.12□□□□□ -0.47
NUP98-205ENST00000397007 BIN2Q9UBW5 565 aaPredicted RBP12.12□□□□□ -0.47
NUP98-205ENST00000397007 SEPT4O43236 478 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 SLC37A4O43826 429 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 STBD1O95210 358 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 CFBP00751 764 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 DUSP28Q4G0W2 176 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 C8orf76Q96K31 380 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 PDGFCQ9NRA1 345 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 TELO2Q9Y4R8 837 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 TBX3O15119 743 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 ELNP15502 786 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 HSCBQ8IWL3 235 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 CEP89Q96ST8 783 aa12.12□□□□□ -0.47
NUP98-205ENST00000397007 ARHGEF6Q15052 776 aa12.11□□□□□ -0.47
NUP98-205ENST00000397007 IQSEC1Q6DN90 963 aa12.11□□□□□ -0.47
NUP98-205ENST00000397007 TBCKQ8TEA7 893 aa12.11□□□□□ -0.47
NUP98-205ENST00000397007 BEGAINQ9BUH8 593 aa12.11□□□□□ -0.47
NUP98-205ENST00000397007 BCAS3Q9H6U6 928 aa12.11□□□□□ -0.47
NUP98-205ENST00000397007 CCND2P30279 289 aa12.11□□□□□ -0.47
NUP98-205ENST00000397007 NASPP49321 788 aaPredicted RBP12.11□□□□□ -0.47
NUP98-205ENST00000397007 SNX17Q15036 470 aa12.11□□□□□ -0.47
NUP98-205ENST00000397007 COL13A1Q5TAT6 717 aaPredicted RBP12.11□□□□□ -0.47
NUP98-205ENST00000397007 HAS3O00219 553 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 ATP9AO75110 1047 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 LGR5O75473 907 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 FARP2O94887 1054 aaPredicted RBP12.1□□□□□ -0.47
NUP98-205ENST00000397007 CYP2B6P20813 491 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 CEP55Q53EZ4 464 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 PGBD1Q96JS3 809 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 SYNRGQ9UMZ2 1314 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 A6NJR5 290 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 STX6O43752 255 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 CYP2C19P33261 490 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 C1orf53Q5VUE5 145 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms