RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 FAM169AQ9Y6X4 670 aa15.46■□□□□ 0.06
NUP98-204ENST00000397004 SNED1Q8TER0 1413 aa15.45■□□□□ 0.06
NUP98-204ENST00000397004 POTEMA6NI47 508 aa15.45■□□□□ 0.06
NUP98-204ENST00000397004 KLRF2D3W0D1 207 aa15.45■□□□□ 0.06
NUP98-204ENST00000397004 MCM3P25205 808 aa15.45■□□□□ 0.06
NUP98-204ENST00000397004 HIBADHP31937 336 aaKnown RBP15.45■□□□□ 0.06
NUP98-204ENST00000397004 BCAS4Q8TDM0 211 aa15.45■□□□□ 0.06
NUP98-204ENST00000397004 PACSIN1Q9BY11 444 aa15.45■□□□□ 0.06
NUP98-204ENST00000397004 BIN2Q9UBW5 565 aaPredicted RBP15.45■□□□□ 0.06
NUP98-204ENST00000397004 STX8Q9UNK0 236 aa15.45■□□□□ 0.06
NUP98-204ENST00000397004 THSD7AQ9UPZ6 1657 aa15.45■□□□□ 0.06
NUP98-204ENST00000397004 PJA2O43164 708 aa15.45■□□□□ 0.06
NUP98-204ENST00000397004 PPARDQ03181 441 aa15.45■□□□□ 0.06
NUP98-204ENST00000397004 COBLL1Q53SF7 1204 aa15.45■□□□□ 0.06
NUP98-204ENST00000397004 PTF1AQ7RTS3 328 aa15.45■□□□□ 0.06
NUP98-204ENST00000397004 IQCKQ8N0W5 287 aa15.45■□□□□ 0.06
NUP98-204ENST00000397004 SAP30BPQ9UHR5 308 aaKnown RBP15.45■□□□□ 0.06
NUP98-204ENST00000397004 TXKP42681 527 aa15.45■□□□□ 0.06
NUP98-204ENST00000397004 GPR101Q96P66 508 aaPredicted RBP15.45■□□□□ 0.06
NUP98-204ENST00000397004 DDX60LQ5H9U9 1706 aaKnown RBP15.44■□□□□ 0.06
NUP98-204ENST00000397004 BICDL2A1A5D9 508 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 SMCO2A6NFE2 343 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 TM4SF1P30408 202 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 PPFIA1Q13136 1202 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 ICE2Q659A1 982 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 PROCA1Q8NCQ7 364 aaPredicted RBP15.44■□□□□ 0.06
NUP98-204ENST00000397004 LINC00116Q8NCU8 138 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 NFU1Q9UMS0 254 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 TDP2O95551 362 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 ATP1A2P50993 1020 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 DNA2P51530 1060 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 SPA17Q15506 151 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 FBXW10Q5XX13 1052 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 TACC1O75410 805 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 EPB41P11171 864 aaKnown RBP15.44■□□□□ 0.06
NUP98-204ENST00000397004 CAVIN3Q969G5 261 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 UIMC1Q96RL1 719 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 UBA5Q9GZZ9 404 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 NLRC4Q9NPP4 1024 aa15.44■□□□□ 0.06
NUP98-204ENST00000397004 ROBO3Q96MS0 1386 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 LAD1O00515 517 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 RNASE9P60153 205 aaKnown RBP15.43■□□□□ 0.06
NUP98-204ENST00000397004 PDXDC1Q6P996 788 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 EFCAB13Q8IY85 973 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 TGFBRAP1Q8WUH2 860 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 PPM1EQ8WY54 764 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 VAT1LQ9HCJ6 419 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 TCP11L1Q9NUJ3 509 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 SBF2Q86WG5 1849 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 CCDC88AQ3V6T2 1871 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 FTCDO95954 541 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 KLRC1P26715 233 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 MAGEA1P43355 309 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 RPS8P62241 208 aaKnown RBP15.43■□□□□ 0.06
NUP98-204ENST00000397004 AK8Q96MA6 479 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 PIGSQ96S52 555 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 CUEDC2Q9H467 287 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 GOLPH3Q9H4A6 298 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 LRRC4CQ9HCJ2 640 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 GDF3Q9NR23 364 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 HYOU1Q9Y4L1 999 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 NAPAP54920 295 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 ZCWPW2Q504Y3 356 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 GOLGA6L1Q8N7Z2 621 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 RNPC3Q96LT9 517 aaKnown RBP15.43■□□□□ 0.06
NUP98-204ENST00000397004 TSGA10Q9BZW7 698 aa15.43■□□□□ 0.06
NUP98-204ENST00000397004 CDK5RAP2Q96SN8 1893 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 AKR1B10O60218 316 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 NEK8Q86SG6 692 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 MAST2Q6P0Q8 1798 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 IPO7O95373 1038 aaKnown RBP15.42■□□□□ 0.06
NUP98-204ENST00000397004 TSPY3P0CV98 308 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 TSPY8P0CW00 308 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 ECHS1P30084 290 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 SKOR1P84550 965 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 GUCY1A3Q02108 690 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 MAN2A1Q16706 1144 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 MAPKAPK5Q8IW41 473 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 MICALL1Q8N3F8 863 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 CASKIN2Q8WXE0 1202 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 RBAK-RBAKDNI3L0D1 243 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 PALMO75781 387 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 EPHB4P54760 987 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 NONOQ15233 471 aaKnown RBP eCLIP15.42■□□□□ 0.06
NUP98-204ENST00000397004 CHADLQ6NUI6 762 aa15.42■□□□□ 0.06
NUP98-204ENST00000397004 DPY19L2P1Q6NXN4 242 aa15.41■□□□□ 0.06
NUP98-204ENST00000397004 DNAJC19Q96DA6 116 aa15.41■□□□□ 0.06
NUP98-204ENST00000397004 SRP68Q9UHB9 627 aaKnown RBP15.41■□□□□ 0.06
NUP98-204ENST00000397004 SRCAPQ6ZRS2 3230 aa15.41■□□□□ 0.06
NUP98-204ENST00000397004 A0A087WUV0 522 aaPredicted RBP15.41■□□□□ 0.06
NUP98-204ENST00000397004 UBAP1LF5GYI3 381 aa15.41■□□□□ 0.06
NUP98-204ENST00000397004 CNNM4Q6P4Q7 775 aa15.41■□□□□ 0.06
NUP98-204ENST00000397004 UNC13DQ70J99 1090 aa15.41■□□□□ 0.06
NUP98-204ENST00000397004 DDX12PQ92771 950 aa15.41■□□□□ 0.06
NUP98-204ENST00000397004 MKNK2Q9HBH9 465 aa15.41■□□□□ 0.06
NUP98-204ENST00000397004 EPB41L5Q9HCM4 733 aa15.41■□□□□ 0.06
NUP98-204ENST00000397004 A0A087X0T9 212 aa15.41■□□□□ 0.06
NUP98-204ENST00000397004 FAM228BP0C875 321 aa15.41■□□□□ 0.06
NUP98-204ENST00000397004 TCP1P17987 556 aaKnown RBP15.41■□□□□ 0.06
NUP98-204ENST00000397004 TNFRSF8P28908 595 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms