RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 TUBE1Q9UJT0 475 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 GDAQ9Y2T3 454 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 SLURP2P0DP57 97 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 FUT2Q10981 343 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 GRM1Q13255 1194 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 PDIA5Q14554 519 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 SNRNP48Q6IEG0 339 aaKnown RBP13.22□□□□□ -0.29
ATN1-202ENST00000396684 P2RX5Q93086 422 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 PAXBP1Q9Y5B6 917 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.22□□□□□ -0.29
ATN1-202ENST00000396684 ECM2O94769 699 aaPredicted RBP13.22□□□□□ -0.29
ATN1-202ENST00000396684 KRT9P35527 623 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 OTUD6AQ7L8S5 288 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 ZFP91Q96JP5 570 aaPredicted RBP13.22□□□□□ -0.29
ATN1-202ENST00000396684 RMDN3Q96TC7 470 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 TMX1Q9H3N1 280 aa13.22□□□□□ -0.29
ATN1-202ENST00000396684 CICQ96RK0 1608 aaPredicted RBP13.21□□□□□ -0.29
ATN1-202ENST00000396684 PRIMPOLQ96LW4 560 aa13.21□□□□□ -0.29
ATN1-202ENST00000396684 CCDC42Q96M95 316 aa13.21□□□□□ -0.29
ATN1-202ENST00000396684 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.29
ATN1-202ENST00000396684 NACC1Q96RE7 527 aa13.21□□□□□ -0.29
ATN1-202ENST00000396684 NUP58Q9BVL2 599 aa13.21□□□□□ -0.29
ATN1-202ENST00000396684 LARSQ9P2J5 1176 aaKnown RBP13.21□□□□□ -0.29
ATN1-202ENST00000396684 FAM178BQ8IXR5 827 aa13.21□□□□□ -0.29
ATN1-202ENST00000396684 THSD7AQ9UPZ6 1657 aa13.21□□□□□ -0.3
ATN1-202ENST00000396684 ARHGAP6O43182 974 aa13.21□□□□□ -0.3
ATN1-202ENST00000396684 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.3
ATN1-202ENST00000396684 RBM43Q6ZSC3 357 aaKnown RBP13.21□□□□□ -0.3
ATN1-202ENST00000396684 LRRC8AQ8IWT6 810 aa13.21□□□□□ -0.3
ATN1-202ENST00000396684 CDHR1Q96JP9 859 aa13.21□□□□□ -0.3
ATN1-202ENST00000396684 IFT74Q96LB3 600 aa13.21□□□□□ -0.3
ATN1-202ENST00000396684 FBXO28Q9NVF7 368 aa13.21□□□□□ -0.3
ATN1-202ENST00000396684 ACTN4O43707 911 aaKnown RBP13.2□□□□□ -0.3
ATN1-202ENST00000396684 VEGFAP15692 232 aaPredicted RBP13.2□□□□□ -0.3
ATN1-202ENST00000396684 OSBPP22059 807 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 CCNE1P24864 410 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 CCND2P30279 289 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 DNM2P50570 870 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 IQCB1Q15051 598 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 DDX12PQ92771 950 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 DNAI1Q9UI46 699 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 C19orf81C9J6K1 198 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 USP8P40818 1118 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 KCTD2Q14681 263 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 XKR9Q5GH70 373 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 CCDC181Q5TID7 509 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 DHX40Q8IX18 779 aaKnown RBP13.2□□□□□ -0.3
ATN1-202ENST00000396684 MKL1Q969V6 931 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 TCHPQ9BT92 498 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 BHMT2Q9H2M3 363 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 AZI2Q9H6S1 392 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 ADD3Q9UEY8 706 aaKnown RBP13.2□□□□□ -0.3
ATN1-202ENST00000396684 IQCA1LA6NCM1 817 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 GNA14O95837 355 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 TUBB4AP04350 444 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 EEF1GP26641 437 aaKnown RBP13.2□□□□□ -0.3
ATN1-202ENST00000396684 COPB1P53618 953 aaKnown RBP13.2□□□□□ -0.3
ATN1-202ENST00000396684 ADKP55263 362 aaKnown RBP13.2□□□□□ -0.3
ATN1-202ENST00000396684 PSMD2Q13200 908 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 NBPF12Q5TAG4 269 aaPredicted RBP13.2□□□□□ -0.3
ATN1-202ENST00000396684 UNC13DQ70J99 1090 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 SCYL3Q8IZE3 742 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 RAD54LQ92698 747 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 PCDHB13Q9Y5F0 798 aa13.2□□□□□ -0.3
ATN1-202ENST00000396684 NID2Q14112 1375 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 POTEB3A0JP26 581 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 POTECB2RU33 542 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 LRRC41Q15345 812 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 TYW1BQ6NUM6 668 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 POTEBQ6S5H4 581 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 RBM46Q8TBY0 533 aaKnown RBP13.19□□□□□ -0.3
ATN1-202ENST00000396684 SLC10A4Q96EP9 437 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 OTUD5Q96G74 571 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 SCN7AQ01118 1682 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 POTEB2H3BUK9 544 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 HOXA7P31268 230 aaPredicted RBP13.19□□□□□ -0.3
ATN1-202ENST00000396684 KRT83P78385 493 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 COG2Q14746 738 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 UBXN4Q92575 508 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 FUCA2Q9BTY2 467 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 EXOC7Q9UPT5 735 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 CCDC172P0C7W6 258 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 INPP5BP32019 993 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 ARID5AQ03989 594 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 MTMR1Q13613 665 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 CTTNQ14247 550 aaKnown RBP13.19□□□□□ -0.3
ATN1-202ENST00000396684 CEP55Q53EZ4 464 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 ELOA2Q8IYF1 753 aaPredicted RBP13.19□□□□□ -0.3
ATN1-202ENST00000396684 CNOT6LQ96LI5 555 aaKnown RBP13.19□□□□□ -0.3
ATN1-202ENST00000396684 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.19□□□□□ -0.3
ATN1-202ENST00000396684 PVALEFA0A1B0GWK0 134 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 ODR4Q5SWX8 454 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 EHBP1Q8NDI1 1231 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 TUBGCP2Q9BSJ2 902 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 MLXIPQ9HAP2 919 aa13.19□□□□□ -0.3
ATN1-202ENST00000396684 WNK3Q9BYP7 1800 aa13.18□□□□□ -0.3
ATN1-202ENST00000396684 E9PMD0 336 aa13.18□□□□□ -0.3
ATN1-202ENST00000396684 SORBS3O60504 671 aa13.18□□□□□ -0.3
ATN1-202ENST00000396684 EXOC3O60645 756 aa13.18□□□□□ -0.3
ATN1-202ENST00000396684 STAT3P40763 770 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms