RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 FBXO16Q8IX29 292 aaPredicted RBP18.74■□□□□ 0.59
AP1S3-202ENST00000396653 TRPV1Q8NER1 839 aa18.74■□□□□ 0.59
AP1S3-202ENST00000396653 OXER1Q8TDS5 423 aa18.74■□□□□ 0.59
AP1S3-202ENST00000396653 INPP4AQ96PE3 977 aaPredicted RBP18.74■□□□□ 0.59
AP1S3-202ENST00000396653 ZHX1Q9UKY1 873 aaPredicted RBP18.74■□□□□ 0.59
AP1S3-202ENST00000396653 BTBD18B2RXH4 712 aa18.73■□□□□ 0.59
AP1S3-202ENST00000396653 H3BQV1 296 aa18.73■□□□□ 0.59
AP1S3-202ENST00000396653 MSCO60682 206 aa18.73■□□□□ 0.59
AP1S3-202ENST00000396653 AKR1A1P14550 325 aa18.73■□□□□ 0.59
AP1S3-202ENST00000396653 ANP32AP39687 249 aaKnown RBP18.73■□□□□ 0.59
AP1S3-202ENST00000396653 MRPS9P82933 396 aaKnown RBP18.73■□□□□ 0.59
AP1S3-202ENST00000396653 NR5A1Q13285 461 aa18.73■□□□□ 0.59
AP1S3-202ENST00000396653 GNPTABQ3T906 1256 aa18.73■□□□□ 0.59
AP1S3-202ENST00000396653 IFFO2Q5TF58 517 aa18.73■□□□□ 0.59
AP1S3-202ENST00000396653 TAPT1Q6NXT6 567 aa18.73■□□□□ 0.59
AP1S3-202ENST00000396653 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.73■□□□□ 0.599e-6■■■■■ 32.4
AP1S3-202ENST00000396653 DDX49Q9Y6V7 483 aaKnown RBP18.73■□□□□ 0.59
AP1S3-202ENST00000396653 HTTP42858 3142 aa18.73■□□□□ 0.59
AP1S3-202ENST00000396653 CCL5P13501 91 aa18.72■□□□□ 0.59
AP1S3-202ENST00000396653 CCND3P30281 292 aaPredicted RBP18.72■□□□□ 0.59
AP1S3-202ENST00000396653 ICAM3P32942 547 aa18.72■□□□□ 0.59
AP1S3-202ENST00000396653 CIITAP33076 1130 aa18.72■□□□□ 0.59
AP1S3-202ENST00000396653 USP11P51784 963 aa18.72■□□□□ 0.59
AP1S3-202ENST00000396653 PRAMEF19Q5SWL8 479 aa18.72■□□□□ 0.59
AP1S3-202ENST00000396653 KCNV1Q6PIU1 500 aa18.72■□□□□ 0.59
AP1S3-202ENST00000396653 MOXD1Q6UVY6 613 aa18.72■□□□□ 0.59
AP1S3-202ENST00000396653 EEPD1Q7L9B9 569 aa18.72■□□□□ 0.59
AP1S3-202ENST00000396653 TBCKQ8TEA7 893 aa18.72■□□□□ 0.59
AP1S3-202ENST00000396653 SCFD2Q8WU76 684 aa18.72■□□□□ 0.59
AP1S3-202ENST00000396653 GPRASP2Q96D09 838 aa18.72■□□□□ 0.59
AP1S3-202ENST00000396653 PAK6Q9NQU5 681 aaPredicted RBP18.72■□□□□ 0.59
AP1S3-202ENST00000396653 FOXD4L1Q9NU39 408 aa18.72■□□□□ 0.59
AP1S3-202ENST00000396653 FAM184BQ9ULE4 1060 aa18.72■□□□□ 0.59
AP1S3-202ENST00000396653 UBIAD1Q9Y5Z9 338 aa18.72■□□□□ 0.59
AP1S3-202ENST00000396653 RGS20O76081 388 aa18.71■□□□□ 0.59
AP1S3-202ENST00000396653 U2AF2P26368 475 aaKnown RBP eCLIP18.71■□□□□ 0.59
AP1S3-202ENST00000396653 TTLL4Q14679 1199 aa18.71■□□□□ 0.59
AP1S3-202ENST00000396653 MTFR1Q15390 333 aa18.71■□□□□ 0.59
AP1S3-202ENST00000396653 IQSEC1Q6DN90 963 aa18.71■□□□□ 0.59
AP1S3-202ENST00000396653 PIK3AP1Q6ZUJ8 805 aa18.71■□□□□ 0.59
AP1S3-202ENST00000396653 NIPA1Q7RTP0 329 aa18.71■□□□□ 0.59
AP1S3-202ENST00000396653 NLRX1Q86UT6 975 aa18.71■□□□□ 0.59
AP1S3-202ENST00000396653 UNC93B1Q9H1C4 597 aa18.71■□□□□ 0.59
AP1S3-202ENST00000396653 DDX20Q9UHI6 824 aaKnown RBP18.71■□□□□ 0.59
AP1S3-202ENST00000396653 NKRFO15226 690 aaKnown RBP eCLIP18.7■□□□□ 0.58
AP1S3-202ENST00000396653 MAFGO15525 162 aa18.7■□□□□ 0.58
AP1S3-202ENST00000396653 FIBPO43427 364 aa18.7■□□□□ 0.58
AP1S3-202ENST00000396653 TGFB3P10600 412 aa18.7■□□□□ 0.58
AP1S3-202ENST00000396653 CAPN2P17655 700 aa18.7■□□□□ 0.58
AP1S3-202ENST00000396653 SYT1P21579 422 aa18.7■□□□□ 0.58
AP1S3-202ENST00000396653 GNL2Q13823 731 aaKnown RBP18.7■□□□□ 0.58
AP1S3-202ENST00000396653 CCDC144BQ3MJ40 725 aa18.7■□□□□ 0.58
AP1S3-202ENST00000396653 CEP55Q53EZ4 464 aa18.7■□□□□ 0.58
AP1S3-202ENST00000396653 NEK8Q86SG6 692 aa18.7■□□□□ 0.58
AP1S3-202ENST00000396653 CDHR1Q96JP9 859 aa18.7■□□□□ 0.58
AP1S3-202ENST00000396653 NAP1L4Q99733 375 aaKnown RBP18.7■□□□□ 0.58
AP1S3-202ENST00000396653 MXRA8Q9BRK3 442 aa18.7■□□□□ 0.58
AP1S3-202ENST00000396653 JADE2Q9NQC1 790 aa18.7■□□□□ 0.58
AP1S3-202ENST00000396653 MYH15Q9Y2K3 1946 aa18.7■□□□□ 0.58
AP1S3-202ENST00000396653 GCFC2P16383 781 aaKnown RBP18.69■□□□□ 0.58
AP1S3-202ENST00000396653 ITGB5P18084 799 aa18.69■□□□□ 0.58
AP1S3-202ENST00000396653 CNGA1P29973 690 aa18.69■□□□□ 0.58
AP1S3-202ENST00000396653 ADCYAP1R1P41586 468 aa18.69■□□□□ 0.58
AP1S3-202ENST00000396653 SETQ01105 290 aaPredicted RBP18.69■□□□□ 0.58
AP1S3-202ENST00000396653 INF2Q27J81 1249 aa18.69■□□□□ 0.58
AP1S3-202ENST00000396653 DUSP28Q4G0W2 176 aa18.69■□□□□ 0.58
AP1S3-202ENST00000396653 EARS2Q5JPH6 523 aaKnown RBP18.69■□□□□ 0.58
AP1S3-202ENST00000396653 CCDC62Q6P9F0 684 aa18.69■□□□□ 0.58
AP1S3-202ENST00000396653 SEPT14Q6ZU15 432 aa18.69■□□□□ 0.58
AP1S3-202ENST00000396653 NOSTRINQ8IVI9 506 aa18.69■□□□□ 0.58
AP1S3-202ENST00000396653 WDR11Q9BZH6 1224 aa18.69■□□□□ 0.58
AP1S3-202ENST00000396653 RNF208Q9H0X6 261 aa18.69■□□□□ 0.58
AP1S3-202ENST00000396653 PDGFCQ9NRA1 345 aa18.69■□□□□ 0.58
AP1S3-202ENST00000396653 DOCK5Q9H7D0 1870 aa18.69■□□□□ 0.58
AP1S3-202ENST00000396653 CYP3A7-CYP3A51PA0A087WV96 503 aa18.68■□□□□ 0.58
AP1S3-202ENST00000396653 KIF28PB7ZC32 967 aa18.68■□□□□ 0.58
AP1S3-202ENST00000396653 MEIS1O00470 390 aa18.68■□□□□ 0.58
AP1S3-202ENST00000396653 EDIL3O43854 480 aa18.68■□□□□ 0.58
AP1S3-202ENST00000396653 DUSP11O75319 330 aaKnown RBP18.68■□□□□ 0.58
AP1S3-202ENST00000396653 GJB1P08034 283 aa18.68■□□□□ 0.58
AP1S3-202ENST00000396653 RARBP10826 455 aa18.68■□□□□ 0.58
AP1S3-202ENST00000396653 CYP3A7P24462 503 aa18.68■□□□□ 0.58
AP1S3-202ENST00000396653 ZNF76P36508 570 aa18.68■□□□□ 0.58
AP1S3-202ENST00000396653 TNFAIP2Q03169 654 aa18.68■□□□□ 0.58
AP1S3-202ENST00000396653 TNS4Q8IZW8 715 aa18.68■□□□□ 0.58
AP1S3-202ENST00000396653 MBOAT7Q96N66 472 aa18.68■□□□□ 0.58
AP1S3-202ENST00000396653 TSHZ2Q9NRE2 1034 aa18.68■□□□□ 0.58
AP1S3-202ENST00000396653 RTEL1Q9NZ71 1219 aa18.68■□□□□ 0.58
AP1S3-202ENST00000396653 GNEQ9Y223 722 aaKnown RBP18.68■□□□□ 0.58
AP1S3-202ENST00000396653 Q9Y3F1 56 aa18.68■□□□□ 0.58
AP1S3-202ENST00000396653 MRVI1Q9Y6F6 885 aa18.68■□□□□ 0.58
AP1S3-202ENST00000396653 IGLV3-22A0A075B6J6 115 aa18.67■□□□□ 0.58
AP1S3-202ENST00000396653 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.67■□□□□ 0.58
AP1S3-202ENST00000396653 VPS37CA5D8V6 355 aaPredicted RBP18.67■□□□□ 0.58
AP1S3-202ENST00000396653 FAM205CA6NFA0 338 aa18.67■□□□□ 0.58
AP1S3-202ENST00000396653 SPATA31C2B4DYI2 1134 aa18.67■□□□□ 0.58
AP1S3-202ENST00000396653 FAM86B1E9PN63 330 aa18.67■□□□□ 0.58
AP1S3-202ENST00000396653 STX6O43752 255 aa18.67■□□□□ 0.58
AP1S3-202ENST00000396653 FAM86B2P0C5J1 330 aa18.67■□□□□ 0.58
AP1S3-202ENST00000396653 SMPD1P17405 629 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms