RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 TRIM29Q14134 588 aa21.96■■□□□ 1.11
HOXA9-202ENST00000396345 ANO1Q5XXA6 986 aa21.96■■□□□ 1.11
HOXA9-202ENST00000396345 PCNX4Q63HM2 1172 aa21.96■■□□□ 1.11
HOXA9-202ENST00000396345 IQSEC1Q6DN90 963 aa21.96■■□□□ 1.11
HOXA9-202ENST00000396345 XRRA1Q6P2D8 792 aa21.96■■□□□ 1.11
HOXA9-202ENST00000396345 SEPT14Q6ZU15 432 aa21.96■■□□□ 1.11
HOXA9-202ENST00000396345 RASGRP4Q8TDF6 673 aa21.96■■□□□ 1.11
HOXA9-202ENST00000396345 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.96■■□□□ 1.11
HOXA9-202ENST00000396345 RBM47A0AV96 593 aaKnown RBP21.95■■□□□ 1.1
HOXA9-202ENST00000396345 K7ELQ4 463 aaPredicted RBP21.95■■□□□ 1.1
HOXA9-202ENST00000396345 TFRCP02786 760 aaKnown RBP21.95■■□□□ 1.1
HOXA9-202ENST00000396345 RARBP10826 455 aa21.95■■□□□ 1.1
HOXA9-202ENST00000396345 TNFAIP2Q03169 654 aa21.95■■□□□ 1.1
HOXA9-202ENST00000396345 CUL4AQ13619 759 aa21.95■■□□□ 1.1
HOXA9-202ENST00000396345 NPY5RQ15761 445 aa21.95■■□□□ 1.1
HOXA9-202ENST00000396345 ZFP91Q96JP5 570 aaPredicted RBP21.95■■□□□ 1.1
HOXA9-202ENST00000396345 KIAA1217Q5T5P2 1943 aa21.94■■□□□ 1.1
HOXA9-202ENST00000396345 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.94■■□□□ 1.1
HOXA9-202ENST00000396345 STAM2O75886 525 aa21.94■■□□□ 1.1
HOXA9-202ENST00000396345 MRPS9P82933 396 aaKnown RBP21.94■■□□□ 1.1
HOXA9-202ENST00000396345 HSCBQ8IWL3 235 aa21.94■■□□□ 1.1
HOXA9-202ENST00000396345 SCFD2Q8WU76 684 aa21.94■■□□□ 1.1
HOXA9-202ENST00000396345 LENG1Q96BZ8 264 aaPredicted RBP21.94■■□□□ 1.1
HOXA9-202ENST00000396345 C8orf76Q96K31 380 aa21.94■■□□□ 1.1
HOXA9-202ENST00000396345 WDR11Q9BZH6 1224 aa21.94■■□□□ 1.1
HOXA9-202ENST00000396345 CRISPLD2Q9H0B8 497 aa21.94■■□□□ 1.1
HOXA9-202ENST00000396345 SMC3Q9UQE7 1217 aa21.94■■□□□ 1.1
HOXA9-202ENST00000396345 KIF3AQ9Y496 699 aa21.94■■□□□ 1.1
HOXA9-202ENST00000396345 ADCY6O43306 1168 aa21.93■■□□□ 1.1
HOXA9-202ENST00000396345 SMPD1P17405 629 aa21.93■■□□□ 1.1
HOXA9-202ENST00000396345 CAPN2P17655 700 aa21.93■■□□□ 1.1
HOXA9-202ENST00000396345 SREBF1P36956 1147 aa21.93■■□□□ 1.1
HOXA9-202ENST00000396345 TTLL4Q14679 1199 aa21.93■■□□□ 1.1
HOXA9-202ENST00000396345 FRMPD3Q5JV73 1810 aa21.93■■□□□ 1.1
HOXA9-202ENST00000396345 KRT40Q6A162 431 aa21.93■■□□□ 1.1
HOXA9-202ENST00000396345 BRMS1Q9HCU9 246 aa21.93■■□□□ 1.1
HOXA9-202ENST00000396345 RTEL1Q9NZ71 1219 aa21.93■■□□□ 1.1
HOXA9-202ENST00000396345 OGDHLQ9ULD0 1010 aa21.93■■□□□ 1.1
HOXA9-202ENST00000396345 M0R2N6 131 aa21.92■■□□□ 1.1
HOXA9-202ENST00000396345 DUSP11O75319 330 aaKnown RBP21.92■■□□□ 1.1
HOXA9-202ENST00000396345 RGS20O76081 388 aa21.92■■□□□ 1.1
HOXA9-202ENST00000396345 EN2P19622 333 aaPredicted RBP21.92■■□□□ 1.1
HOXA9-202ENST00000396345 GJB2P29033 226 aa21.92■■□□□ 1.1
HOXA9-202ENST00000396345 KRT2P35908 639 aa21.92■■□□□ 1.1
HOXA9-202ENST00000396345 DUSP28Q4G0W2 176 aa21.92■■□□□ 1.1
HOXA9-202ENST00000396345 XPNPEP3Q9NQH7 507 aa21.92■■□□□ 1.1
HOXA9-202ENST00000396345 MMP1P03956 469 aa21.91■■□□□ 1.1
HOXA9-202ENST00000396345 TXNP10599 105 aaKnown RBP21.91■■□□□ 1.1
HOXA9-202ENST00000396345 ARHGAP4P98171 946 aa21.91■■□□□ 1.1
HOXA9-202ENST00000396345 GUCY1B3Q02153 619 aa21.91■■□□□ 1.1
HOXA9-202ENST00000396345 GNPTABQ3T906 1256 aa21.91■■□□□ 1.1
HOXA9-202ENST00000396345 TMEM63BQ5T3F8 832 aa21.91■■□□□ 1.1
HOXA9-202ENST00000396345 OXER1Q8TDS5 423 aa21.91■■□□□ 1.1
HOXA9-202ENST00000396345 INPP4AQ96PE3 977 aaPredicted RBP21.91■■□□□ 1.1
HOXA9-202ENST00000396345 MRVI1Q9Y6F6 885 aa21.91■■□□□ 1.1
HOXA9-202ENST00000396345 NKRFO15226 690 aaKnown RBP eCLIP21.9■■□□□ 1.1
HOXA9-202ENST00000396345 ARIH2O95376 493 aa21.9■■□□□ 1.1
HOXA9-202ENST00000396345 SAFBQ15424 915 aaKnown RBP eCLIP21.9■■□□□ 1.1
HOXA9-202ENST00000396345 CCDC62Q6P9F0 684 aa21.9■■□□□ 1.1
HOXA9-202ENST00000396345 KCNV1Q6PIU1 500 aa21.9■■□□□ 1.1
HOXA9-202ENST00000396345 KRT25Q7Z3Z0 450 aa21.9■■□□□ 1.1
HOXA9-202ENST00000396345 NLRX1Q86UT6 975 aa21.9■■□□□ 1.1
HOXA9-202ENST00000396345 FBXO18Q8NFZ0 1043 aa21.9■■□□□ 1.1
HOXA9-202ENST00000396345 GNEQ9Y223 722 aaKnown RBP21.9■■□□□ 1.1
HOXA9-202ENST00000396345 UBIAD1Q9Y5Z9 338 aa21.9■■□□□ 1.1
HOXA9-202ENST00000396345 MYH7BA7E2Y1 1941 aa21.89■■□□□ 1.09
HOXA9-202ENST00000396345 CCDC194A0A1B0GVG4 234 aa21.89■■□□□ 1.09
HOXA9-202ENST00000396345 PGK1P00558 417 aa21.89■■□□□ 1.09
HOXA9-202ENST00000396345 CYP3A4P08684 503 aa21.89■■□□□ 1.09
HOXA9-202ENST00000396345 ZNF76P36508 570 aa21.89■■□□□ 1.09
HOXA9-202ENST00000396345 LY6KQ17RY6 165 aa21.89■■□□□ 1.09
HOXA9-202ENST00000396345 GJC2Q5T442 439 aaPredicted RBP21.89■■□□□ 1.09
HOXA9-202ENST00000396345 ARRDC4Q8NCT1 418 aa21.89■■□□□ 1.09
HOXA9-202ENST00000396345 CRYGNQ8WXF5 182 aa21.89■■□□□ 1.09
HOXA9-202ENST00000396345 INTS4Q96HW7 963 aaKnown RBP21.89■■□□□ 1.09
HOXA9-202ENST00000396345 AP5M1Q9H0R1 490 aa21.89■■□□□ 1.09
HOXA9-202ENST00000396345 SPC25Q9HBM1 224 aa21.89■■□□□ 1.09
HOXA9-202ENST00000396345 DDX41Q9UJV9 622 aaKnown RBP21.89■■□□□ 1.09
HOXA9-202ENST00000396345 Q9Y3F1 56 aa21.89■■□□□ 1.09
HOXA9-202ENST00000396345 SYNRGQ9UMZ2 1314 aa21.88■■□□□ 1.09
HOXA9-202ENST00000396345 SPATA31C2B4DYI2 1134 aa21.88■■□□□ 1.09
HOXA9-202ENST00000396345 DYNC1LI2O43237 492 aaPredicted RBP21.88■■□□□ 1.09
HOXA9-202ENST00000396345 FIBPO43427 364 aa21.88■■□□□ 1.09
HOXA9-202ENST00000396345 MYCNP04198 464 aaPredicted RBP21.88■■□□□ 1.09
HOXA9-202ENST00000396345 TGFB3P10600 412 aa21.88■■□□□ 1.09
HOXA9-202ENST00000396345 ITGB5P18084 799 aa21.88■■□□□ 1.09
HOXA9-202ENST00000396345 PTGS1P23219 599 aa21.88■■□□□ 1.09
HOXA9-202ENST00000396345 ICAM3P32942 547 aa21.88■■□□□ 1.09
HOXA9-202ENST00000396345 GJA9P57773 515 aa21.88■■□□□ 1.09
HOXA9-202ENST00000396345 NONOQ15233 471 aaKnown RBP eCLIP21.88■■□□□ 1.09
HOXA9-202ENST00000396345 TLK2Q86UE8 772 aa21.88■■□□□ 1.09
HOXA9-202ENST00000396345 DIS3L2Q8IYB7 885 aaKnown RBP21.88■■□□□ 1.09
HOXA9-202ENST00000396345 ANKLE1Q8NAG6 615 aa21.88■■□□□ 1.09
HOXA9-202ENST00000396345 TBCKQ8TEA7 893 aa21.88■■□□□ 1.09
HOXA9-202ENST00000396345 COPS5Q92905 334 aa21.88■■□□□ 1.09
HOXA9-202ENST00000396345 GPRASP2Q96D09 838 aa21.88■■□□□ 1.09
HOXA9-202ENST00000396345 MXRA8Q9BRK3 442 aa21.88■■□□□ 1.09
HOXA9-202ENST00000396345 UPF3AQ9H1J1 476 aaKnown RBP21.88■■□□□ 1.09
HOXA9-202ENST00000396345 BTBD18B2RXH4 712 aa21.87■■□□□ 1.09
HOXA9-202ENST00000396345 ADAMTS4O75173 837 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms