RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 ARFGAP2Q8N6H7 521 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 MTMR8Q96EF0 704 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 ATP6V1G3Q96LB4 118 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 PLIN2Q99541 437 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 LRRC27Q9C0I9 530 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 MMRN2Q9H8L6 949 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 RIC8AQ9NPQ8 531 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 FAM207AQ9NSI2 230 aaPredicted RBP9.61□□□□□ -0.87
BDNF-204ENST00000395980 CCDC87Q9NVE4 849 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 BSDC1Q9NW68 430 aaPredicted RBP9.61□□□□□ -0.87
BDNF-204ENST00000395980 HEXIM1O94992 359 aaKnown RBP9.61□□□□□ -0.87
BDNF-204ENST00000395980 HSPA9P38646 679 aaKnown RBP9.61□□□□□ -0.87
BDNF-204ENST00000395980 NAA35Q5VZE5 725 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 HGSNATQ68CP4 663 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 PPP4R3AQ6IN85 833 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 SV2BQ7L1I2 683 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 FAM84BQ96KN1 310 aaPredicted RBP9.61□□□□□ -0.87
BDNF-204ENST00000395980 CEP72Q9P209 647 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 PCDHGC5Q9Y5F6 944 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 MECOMQ03112 1051 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 PSMD2Q13200 908 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 PTGISQ16647 500 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 SKIDA1Q1XH10 827 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 SLC9C1Q4G0N8 1177 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 LRRC55Q6ZSA7 311 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 SPZ1Q9BXG8 430 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 SALL4Q9UJQ4 1053 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 SERPING1P05155 500 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 GLI1P08151 1106 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 MYBP10242 640 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 TNNC1P63316 161 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 NAB2Q15742 525 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 HEATR3Q7Z4Q2 680 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 STAG2Q8N3U4 1231 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 RNPC3Q96LT9 517 aaKnown RBP9.6□□□□□ -0.87
BDNF-204ENST00000395980 INPP4AQ96PE3 977 aaPredicted RBP9.6□□□□□ -0.87
BDNF-204ENST00000395980 TSG101Q99816 390 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 MMTAG2Q9BU76 263 aaKnown RBP9.6□□□□□ -0.87
BDNF-204ENST00000395980 SAMM50Q9Y512 469 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 CAPN7Q9Y6W3 813 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 CCDC88AQ3V6T2 1871 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 PALM3A6NDB9 673 aaPredicted RBP9.6□□□□□ -0.87
BDNF-204ENST00000395980 NCK2O43639 380 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 CXCR5P32302 372 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 MDH1P40925 334 aaKnown RBP9.6□□□□□ -0.87
BDNF-204ENST00000395980 SLC1A4P43007 532 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 CARSP49589 748 aaKnown RBP9.6□□□□□ -0.87
BDNF-204ENST00000395980 SF3B3Q15393 1217 aaKnown RBP9.6□□□□□ -0.87
BDNF-204ENST00000395980 CDC37Q16543 378 aaPredicted RBP9.6□□□□□ -0.87
BDNF-204ENST00000395980 FBXW10Q5XX13 1052 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 INTS5Q6P9B9 1019 aaKnown RBP9.6□□□□□ -0.87
BDNF-204ENST00000395980 CACNA2D4Q7Z3S7 1137 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 NEK8Q86SG6 692 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 PIK3R5Q8WYR1 880 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 PLCB1Q9NQ66 1216 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 NFU1Q9UMS0 254 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 COL4A1P02462 1669 aa9.6□□□□□ -0.87
BDNF-204ENST00000395980 XIRP1Q702N8 1843 aaKnown RBP9.6□□□□□ -0.87
BDNF-204ENST00000395980 BTNL10A8MVZ5 291 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 GNA11P29992 359 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 MNAT1P51948 309 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 TFAP4Q01664 338 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 RASSF7Q02833 373 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 SH2D3CQ8N5H7 860 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 ZNF473Q8WTR7 871 aaKnown RBP9.59□□□□□ -0.87
BDNF-204ENST00000395980 EPB41L5Q9HCM4 733 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 IL17RBQ9NRM6 502 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 SMARCAL1Q9NZC9 954 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 FAM107AO95990 144 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 KRT14P02533 472 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 CYP2D6P10635 497 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 GUCY2DQ02846 1103 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 SLC35G1Q2M3R5 365 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 MEI1Q5TIA1 1274 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 CERS3Q8IU89 383 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 C6orf50Q9HD87 102 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 SLC39A2Q9NP94 309 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 EHD2Q9NZN4 543 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 ATP8B3O60423 1300 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 ATAD5Q96QE3 1844 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 ESYT2A0FGR8 921 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 CYTH3O43739 400 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 SMARCA1P28370 1054 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 FXR2P51116 673 aaKnown RBP eCLIP9.59□□□□□ -0.87
BDNF-204ENST00000395980 GFPT1Q06210 699 aaPredicted RBP9.59□□□□□ -0.87
BDNF-204ENST00000395980 EHHADHQ08426 723 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 SEPT2Q15019 361 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 C12orf60Q5U649 245 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 SFMBT2Q5VUG0 894 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 NLRP14Q86W24 1093 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 MYCBPAPQ8TBZ2 947 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 EEF2KMTQ96G04 330 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 BLOC1S4Q9NUP1 217 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 TMEM59LQ9UK28 342 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 NIP7Q9Y221 180 aaKnown RBP eCLIP9.59□□□□□ -0.87
BDNF-204ENST00000395980 H0YHG0 523 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 NKRFO15226 690 aaKnown RBP eCLIP9.59□□□□□ -0.87
BDNF-204ENST00000395980 ATP1A2P50993 1020 aa9.59□□□□□ -0.87
BDNF-204ENST00000395980 ITGB3BPQ13352 177 aaPredicted RBP9.59□□□□□ -0.87
BDNF-204ENST00000395980 CUL1Q13616 776 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms