RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 ATG9AQ7Z3C6 839 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 RBM41Q96IZ5 413 aaKnown RBP12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 STIM2Q9P246 746 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 RCOR1Q9UKL0 485 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 CD2APQ9Y5K6 639 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 ZNF213O14771 459 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 FAM200BP0CF97 657 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 INTS8Q75QN2 995 aaKnown RBP12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 PROM2Q8N271 834 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 CRYBG1Q9Y4K1 1723 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 DOT1LQ8TEK3 1739 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 POLRMTO00411 1230 aaKnown RBP12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 SEMA3EO15041 775 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 MYL1P05976 194 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 CASP14P31944 242 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 AARSP49588 968 aaKnown RBP eCLIP12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 SLC44A4Q53GD3 710 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 OTUD7BQ6GQQ9 843 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 CCNI2Q6ZMN8 369 aaPredicted RBP12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 NIM1KQ8IY84 436 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 TEX9Q8N6V9 391 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 EDC3Q96F86 508 aaKnown RBP12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 SEC16BQ96JE7 1060 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 VPS16Q9H269 839 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 LMCD1Q9NZU5 365 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 CHMP2BQ9UQN3 213 aa12.44□□□□□ -0.42
RAPGEF3-202ENST00000395358 FESP07332 822 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 SERPINB4P48594 390 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 RBL2Q08999 1139 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 WDR93Q6P2C0 686 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 ANKRD23Q86SG2 305 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 AKT1S1Q96B36 256 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 ZSWIM6Q9HCJ5 1215 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 MAGEB6P1A0A0J9YX57 407 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 AKR1B10O60218 316 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 CHRNA5P30532 468 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 GCLCP48506 637 aaPredicted RBP12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 RAD23BP54727 409 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 CFAP157Q5JU67 520 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 EMBQ6PCB8 327 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 SP8Q8IXZ3 490 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 RTKN2Q8IZC4 609 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 MSL3Q8N5Y2 521 aaKnown RBP12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 P3H4Q92791 437 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 TM6SF1Q9BZW5 370 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 ZNF287Q9HBT7 754 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 PNPLA7Q6ZV29 1317 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 HMGB1P1B2RPK0 211 aaPredicted RBP12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 CCND1P24385 295 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 GTF2IP78347 998 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 GUCY2DQ02846 1103 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 IFI16Q16666 785 aaKnown RBP12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 RBM43Q6ZSC3 357 aaKnown RBP12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 CCDC65Q8IXS2 484 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 OR8K1Q8NGG5 319 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 APPBP2Q92624 585 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 NAF1Q96HR8 494 aaKnown RBP12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 HIC2Q96JB3 615 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 GALNT8Q9NY28 637 aa12.43□□□□□ -0.42
RAPGEF3-202ENST00000395358 CFAP73A6NFT4 308 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 SNAP23O00161 211 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 PLCG2P16885 1265 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 TRIM21P19474 475 aaKnown RBP12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 RPS6KB1P23443 525 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 PTH1RQ03431 593 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 SETDB1Q15047 1291 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 OLFML2BQ68BL8 750 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 MAP7D3Q8IWC1 876 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 RMDN2Q96LZ7 410 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 MMS19Q96T76 1030 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 DDX23Q9BUQ8 820 aaKnown RBP12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 HAUS4Q9H6D7 363 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 OPHN1O60890 802 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 SKIP12755 728 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 PFKFB1P16118 471 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 GNAT2P19087 354 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 IFNAR2P48551 515 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 DOK7Q18PE1 504 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 ZC3H18Q86VM9 953 aaKnown RBP12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 ARHGEF2Q92974 986 aaKnown RBP12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 STMN2Q93045 179 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 LRRC45Q96CN5 670 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 SLC4A4Q9Y6R1 1079 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 KDM3BQ7LBC6 1761 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 RAD21O60216 631 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 MIGA1Q8NAN2 632 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 RAB3IPQ96QF0 476 aaPredicted RBP12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 ELAC2Q9BQ52 826 aaKnown RBP12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 LUC7LQ9NQ29 371 aaKnown RBP12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 LARSQ9P2J5 1176 aaKnown RBP12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 MAST3O60307 1309 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 TMCC1O94876 653 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 AFMP43652 599 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 RESTQ13127 1097 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 MFSD14BQ5SR56 506 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 YTHDF3Q7Z739 585 aaKnown RBP12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 MAB21L3Q8N8X9 362 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 PLEKHG4BQ96PX9 1271 aa12.42□□□□□ -0.42
RAPGEF3-202ENST00000395358 DNAAF2Q9NVR5 837 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms