RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 MYH6P13533 1939 aa24.71■■□□□ 1.55
TRAF4-203ENST00000394925 ZNF213O14771 459 aa24.7■■□□□ 1.54
TRAF4-203ENST00000394925 SELPP16109 830 aa24.7■■□□□ 1.54
TRAF4-203ENST00000394925 RRP1P56182 461 aaKnown RBP24.7■■□□□ 1.54
TRAF4-203ENST00000394925 WDR5P61964 334 aaKnown RBP24.7■■□□□ 1.54
TRAF4-203ENST00000394925 STXBP2Q15833 593 aa24.7■■□□□ 1.54
TRAF4-203ENST00000394925 LRRC8DQ7L1W4 858 aa24.7■■□□□ 1.54
TRAF4-203ENST00000394925 DHX38Q92620 1227 aaKnown RBP24.7■■□□□ 1.54
TRAF4-203ENST00000394925 RMDN3Q96TC7 470 aa24.7■■□□□ 1.54
TRAF4-203ENST00000394925 ZBED2Q9BTP6 218 aa24.7■■□□□ 1.54
TRAF4-203ENST00000394925 LCHNA4D1U4 455 aa24.69■■□□□ 1.54
TRAF4-203ENST00000394925 MFAP1P55081 439 aaKnown RBP24.69■■□□□ 1.54
TRAF4-203ENST00000394925 HDAC1Q13547 482 aaPredicted RBP24.69■■□□□ 1.54
TRAF4-203ENST00000394925 IQCA1Q86XH1 822 aa24.69■■□□□ 1.54
TRAF4-203ENST00000394925 MCF2L2Q86YR7 1114 aa24.69■■□□□ 1.54
TRAF4-203ENST00000394925 IWS1Q96ST2 819 aa24.69■■□□□ 1.54
TRAF4-203ENST00000394925 LNPKQ9C0E8 428 aa24.69■■□□□ 1.54
TRAF4-203ENST00000394925 MAF1Q9H063 256 aa24.69■■□□□ 1.54
TRAF4-203ENST00000394925 KAT14Q9H8E8 782 aa24.69■■□□□ 1.54
TRAF4-203ENST00000394925 DHX16O60231 1041 aaKnown RBP24.68■■□□□ 1.54
TRAF4-203ENST00000394925 KDM4AO75164 1064 aa24.68■■□□□ 1.54
TRAF4-203ENST00000394925 SDSP20132 328 aa24.68■■□□□ 1.54
TRAF4-203ENST00000394925 DEFB103AP81534 67 aa24.68■■□□□ 1.54
TRAF4-203ENST00000394925 DGKDQ16760 1214 aa24.68■■□□□ 1.54
TRAF4-203ENST00000394925 QRICH1Q2TAL8 776 aa24.68■■□□□ 1.54
TRAF4-203ENST00000394925 CCDC178Q5BJE1 867 aa24.68■■□□□ 1.54
TRAF4-203ENST00000394925 ARHGEF16Q5VV41 709 aa24.68■■□□□ 1.54
TRAF4-203ENST00000394925 HLA-CQ95604 372 aa24.68■■□□□ 1.54
TRAF4-203ENST00000394925 ALG1Q9BT22 464 aa24.68■■□□□ 1.54
TRAF4-203ENST00000394925 C1QTNF1Q9BXJ1 281 aa24.68■■□□□ 1.54
TRAF4-203ENST00000394925 VAT1LQ9HCJ6 419 aa24.68■■□□□ 1.54
TRAF4-203ENST00000394925 HDAC6Q9UBN7 1215 aa24.68■■□□□ 1.54
TRAF4-203ENST00000394925 BRWD1Q9NSI6 2320 aa24.68■■□□□ 1.54
TRAF4-203ENST00000394925 MYH7BA7E2Y1 1941 aa24.67■■□□□ 1.54
TRAF4-203ENST00000394925 COL4A4P53420 1690 aaPredicted RBP24.67■■□□□ 1.54
TRAF4-203ENST00000394925 LPXNO60711 386 aa24.67■■□□□ 1.54
TRAF4-203ENST00000394925 CKBP12277 381 aa24.67■■□□□ 1.54
TRAF4-203ENST00000394925 EIF2AK2P19525 551 aaKnown RBP24.67■■□□□ 1.54
TRAF4-203ENST00000394925 CNKSR3Q6P9H4 555 aa24.67■■□□□ 1.54
TRAF4-203ENST00000394925 FBXO11Q86XK2 927 aa24.67■■□□□ 1.54
TRAF4-203ENST00000394925 C7orf31Q8N865 590 aa24.67■■□□□ 1.54
TRAF4-203ENST00000394925 GTF2IRD1Q9UHL9 959 aa24.67■■□□□ 1.54
TRAF4-203ENST00000394925 DDX41Q9UJV9 622 aaKnown RBP24.67■■□□□ 1.54
TRAF4-203ENST00000394925 MRPL11Q9Y3B7 192 aaKnown RBP24.67■■□□□ 1.54
TRAF4-203ENST00000394925 B4E1Z4 1266 aa24.66■■□□□ 1.54
TRAF4-203ENST00000394925 NBNO60934 754 aa24.66■■□□□ 1.54
TRAF4-203ENST00000394925 PSEN2P49810 448 aa24.66■■□□□ 1.54
TRAF4-203ENST00000394925 TCTN1Q2MV58 587 aa24.66■■□□□ 1.54
TRAF4-203ENST00000394925 ASPRV1Q53RT3 343 aa24.66■■□□□ 1.54
TRAF4-203ENST00000394925 GDPD5Q8WTR4 605 aa24.66■■□□□ 1.54
TRAF4-203ENST00000394925 RBAK-RBAKDNI3L0D1 243 aa24.65■■□□□ 1.54
TRAF4-203ENST00000394925 EIF3JO75822 258 aaKnown RBP24.65■■□□□ 1.54
TRAF4-203ENST00000394925 PARNO95453 639 aaKnown RBP24.65■■□□□ 1.54
TRAF4-203ENST00000394925 CXCL10P02778 98 aa24.65■■□□□ 1.54
TRAF4-203ENST00000394925 RBL2Q08999 1139 aa24.65■■□□□ 1.54
TRAF4-203ENST00000394925 ANKS1AQ92625 1134 aa24.65■■□□□ 1.54
TRAF4-203ENST00000394925 ZSCAN10Q96SZ4 725 aaPredicted RBP24.65■■□□□ 1.54
TRAF4-203ENST00000394925 JMJD4Q9H9V9 463 aa24.65■■□□□ 1.54
TRAF4-203ENST00000394925 MRVI1Q9Y6F6 885 aa24.65■■□□□ 1.54
TRAF4-203ENST00000394925 LAMA4Q16363 1823 aa24.65■■□□□ 1.54
TRAF4-203ENST00000394925 CFBP00751 764 aa24.64■■□□□ 1.54
TRAF4-203ENST00000394925 NR3C2P08235 984 aa24.64■■□□□ 1.54
TRAF4-203ENST00000394925 PARP1P09874 1014 aaKnown RBP24.64■■□□□ 1.54
TRAF4-203ENST00000394925 ZNF286BP0CG31 522 aa24.64■■□□□ 1.54
TRAF4-203ENST00000394925 PLA2G5P39877 138 aa24.64■■□□□ 1.54
TRAF4-203ENST00000394925 MFSD10Q14728 455 aa24.64■■□□□ 1.54
TRAF4-203ENST00000394925 KIAA0753Q2KHM9 967 aa24.64■■□□□ 1.54
TRAF4-203ENST00000394925 ENAHQ8N8S7 591 aaPredicted RBP24.64■■□□□ 1.54
TRAF4-203ENST00000394925 EMID1Q96A84 441 aaPredicted RBP24.64■■□□□ 1.54
TRAF4-203ENST00000394925 KATNAL1Q9BW62 490 aa24.64■■□□□ 1.54
TRAF4-203ENST00000394925 EPHX3Q9H6B9 360 aa24.64■■□□□ 1.54
TRAF4-203ENST00000394925 PXMP2Q9NR77 195 aa24.64■■□□□ 1.54
TRAF4-203ENST00000394925 MTUS1Q9ULD2 1270 aa24.64■■□□□ 1.54
TRAF4-203ENST00000394925 ABHD14A-ACY1A0A1B0GW23 586 aa24.63■■□□□ 1.53
TRAF4-203ENST00000394925 NT5C2P49902 561 aa24.63■■□□□ 1.53
TRAF4-203ENST00000394925 LAMC2Q13753 1193 aa24.63■■□□□ 1.53
TRAF4-203ENST00000394925 CWC27Q6UX04 472 aaKnown RBP24.63■■□□□ 1.53
TRAF4-203ENST00000394925 DHX37Q8IY37 1157 aaKnown RBP24.63■■□□□ 1.53
TRAF4-203ENST00000394925 FAM122AQ96E09 287 aa24.63■■□□□ 1.53
TRAF4-203ENST00000394925 RAD9AQ99638 391 aa24.63■■□□□ 1.53
TRAF4-203ENST00000394925 ZSWIM5Q9P217 1185 aa24.63■■□□□ 1.53
TRAF4-203ENST00000394925 GJB5O95377 273 aa24.62■■□□□ 1.53
TRAF4-203ENST00000394925 F2P00734 622 aa24.62■■□□□ 1.53
TRAF4-203ENST00000394925 ZNF200P98182 395 aaPredicted RBP24.62■■□□□ 1.53
TRAF4-203ENST00000394925 PTK7Q13308 1070 aa24.62■■□□□ 1.53
TRAF4-203ENST00000394925 IKBKEQ14164 716 aa24.62■■□□□ 1.53
TRAF4-203ENST00000394925 B4GALNT3Q6L9W6 998 aa24.62■■□□□ 1.53
TRAF4-203ENST00000394925 FAM117BQ6P1L5 589 aa24.62■■□□□ 1.53
TRAF4-203ENST00000394925 PPTC7Q8NI37 304 aa24.62■■□□□ 1.53
TRAF4-203ENST00000394925 WNT8BQ93098 351 aa24.62■■□□□ 1.53
TRAF4-203ENST00000394925 LMCD1Q9NZU5 365 aa24.62■■□□□ 1.53
TRAF4-203ENST00000394925 HAS3O00219 553 aa24.61■■□□□ 1.53
TRAF4-203ENST00000394925 SORBS3O60504 671 aa24.61■■□□□ 1.53
TRAF4-203ENST00000394925 TRIM71Q2Q1W2 868 aaKnown RBP24.61■■□□□ 1.53
TRAF4-203ENST00000394925 ZNF618Q5T7W0 954 aa24.61■■□□□ 1.53
TRAF4-203ENST00000394925 SUGCTQ9HAC7 445 aa24.61■■□□□ 1.53
TRAF4-203ENST00000394925 DIAPH3Q9NSV4 1193 aa24.61■■□□□ 1.53
TRAF4-203ENST00000394925 EFCAB14O75071 495 aa24.6■■□□□ 1.53
TRAF4-203ENST00000394925 MYCLP12524 364 aaPredicted RBP24.6■■□□□ 1.53
TRAF4-203ENST00000394925 ERVK-21P61565 698 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms