RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 SIP14410 1827 aa23.12■■□□□ 1.29
UPK3B-203ENST00000394849 SNHG28P0DPA3 235 aa23.11■■□□□ 1.29
UPK3B-203ENST00000394849 ALADP13716 330 aa23.11■■□□□ 1.29
UPK3B-203ENST00000394849 MX1P20591 662 aa23.11■■□□□ 1.29
UPK3B-203ENST00000394849 DEFB103AP81534 67 aa23.11■■□□□ 1.29
UPK3B-203ENST00000394849 RRP12Q5JTH9 1297 aaKnown RBP23.11■■□□□ 1.29
UPK3B-203ENST00000394849 FAM178BQ8IXR5 827 aa23.11■■□□□ 1.29
UPK3B-203ENST00000394849 GJD3Q8N144 294 aa23.11■■□□□ 1.29
UPK3B-203ENST00000394849 C7orf31Q8N865 590 aa23.11■■□□□ 1.29
UPK3B-203ENST00000394849 KHSRPQ92945 711 aaKnown RBP eCLIP23.11■■□□□ 1.29
UPK3B-203ENST00000394849 HELLSQ9NRZ9 838 aa23.11■■□□□ 1.29
UPK3B-203ENST00000394849 INSL6Q9Y581 213 aa23.11■■□□□ 1.29
UPK3B-203ENST00000394849 KIAA1217Q5T5P2 1943 aa23.1■■□□□ 1.29
UPK3B-203ENST00000394849 LINC01553A4QN01 128 aa23.1■■□□□ 1.29
UPK3B-203ENST00000394849 NBNO60934 754 aa23.1■■□□□ 1.29
UPK3B-203ENST00000394849 ARHGAP1Q07960 439 aa23.1■■□□□ 1.29
UPK3B-203ENST00000394849 PTK7Q13308 1070 aa23.1■■□□□ 1.29
UPK3B-203ENST00000394849 STXBP2Q15833 593 aa23.1■■□□□ 1.29
UPK3B-203ENST00000394849 SPRED2Q7Z698 418 aa23.1■■□□□ 1.29
UPK3B-203ENST00000394849 MCF2L2Q86YR7 1114 aa23.1■■□□□ 1.29
UPK3B-203ENST00000394849 KAT2BQ92831 832 aa23.1■■□□□ 1.29
UPK3B-203ENST00000394849 EMID1Q96A84 441 aaPredicted RBP23.1■■□□□ 1.29
UPK3B-203ENST00000394849 ZMYM6O95789 1325 aa23.09■■□□□ 1.29
UPK3B-203ENST00000394849 EMSYQ7Z589 1322 aa23.09■■□□□ 1.29
UPK3B-203ENST00000394849 NT5C2P49902 561 aa23.09■■□□□ 1.29
UPK3B-203ENST00000394849 VPS53Q5VIR6 699 aa23.09■■□□□ 1.29
UPK3B-203ENST00000394849 SEPT14Q6ZU15 432 aa23.09■■□□□ 1.29
UPK3B-203ENST00000394849 DHX38Q92620 1227 aaKnown RBP23.09■■□□□ 1.29
UPK3B-203ENST00000394849 EVI5LQ96CN4 794 aa23.09■■□□□ 1.29
UPK3B-203ENST00000394849 CD320Q9NPF0 282 aa23.09■■□□□ 1.29
UPK3B-203ENST00000394849 ABCB11O95342 1321 aa23.08■■□□□ 1.29
UPK3B-203ENST00000394849 FAM86C2PA6NEL3 165 aa23.08■■□□□ 1.29
UPK3B-203ENST00000394849 FGAP02671 866 aa23.08■■□□□ 1.29
UPK3B-203ENST00000394849 LAMC2Q13753 1193 aa23.08■■□□□ 1.29
UPK3B-203ENST00000394849 PTPROQ16827 1216 aa23.08■■□□□ 1.29
UPK3B-203ENST00000394849 LY6KQ17RY6 165 aa23.08■■□□□ 1.29
UPK3B-203ENST00000394849 TMCO2Q7Z6W1 182 aaPredicted RBP23.08■■□□□ 1.29
UPK3B-203ENST00000394849 MTUS1Q9ULD2 1270 aa23.08■■□□□ 1.29
UPK3B-203ENST00000394849 KCNA5P22460 613 aa23.07■■□□□ 1.28
UPK3B-203ENST00000394849 USH1GQ495M9 461 aa23.07■■□□□ 1.28
UPK3B-203ENST00000394849 FBXO22Q8NEZ5 403 aa23.07■■□□□ 1.28
UPK3B-203ENST00000394849 SAMD11Q96NU1 681 aa23.07■■□□□ 1.28
UPK3B-203ENST00000394849 HDAC6Q9UBN7 1215 aa23.07■■□□□ 1.28
UPK3B-203ENST00000394849 EIF3JO75822 258 aaKnown RBP23.06■■□□□ 1.28
UPK3B-203ENST00000394849 F2P00734 622 aa23.06■■□□□ 1.28
UPK3B-203ENST00000394849 SSTR3P32745 418 aaPredicted RBP23.06■■□□□ 1.28
UPK3B-203ENST00000394849 PSEN2P49810 448 aa23.06■■□□□ 1.28
UPK3B-203ENST00000394849 MFSD6Q6ZSS7 791 aa23.06■■□□□ 1.28
UPK3B-203ENST00000394849 CHST3Q7LGC8 479 aa23.06■■□□□ 1.28
UPK3B-203ENST00000394849 PPTC7Q8NI37 304 aa23.06■■□□□ 1.28
UPK3B-203ENST00000394849 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.06■■□□□ 1.28
UPK3B-203ENST00000394849 RMDN3Q96TC7 470 aa23.06■■□□□ 1.28
UPK3B-203ENST00000394849 RNF41Q9H4P4 317 aaPredicted RBP23.06■■□□□ 1.28
UPK3B-203ENST00000394849 ZBTB47Q9UFB7 747 aaPredicted RBP23.06■■□□□ 1.28
UPK3B-203ENST00000394849 DDX41Q9UJV9 622 aaKnown RBP23.06■■□□□ 1.28
UPK3B-203ENST00000394849 FAM50BQ9Y247 325 aa23.06■■□□□ 1.28
UPK3B-203ENST00000394849 LGR5O75473 907 aa23.05■■□□□ 1.28
UPK3B-203ENST00000394849 AMHP03971 560 aa23.05■■□□□ 1.28
UPK3B-203ENST00000394849 MFSD10Q14728 455 aa23.05■■□□□ 1.28
UPK3B-203ENST00000394849 MCMDC2Q4G0Z9 681 aa23.05■■□□□ 1.28
UPK3B-203ENST00000394849 CCDC178Q5BJE1 867 aa23.05■■□□□ 1.28
UPK3B-203ENST00000394849 PTCRAQ6ISU1 281 aaPredicted RBP23.05■■□□□ 1.28
UPK3B-203ENST00000394849 DGKHQ86XP1 1220 aa23.05■■□□□ 1.28
UPK3B-203ENST00000394849 SYTL5Q8TDW5 730 aaPredicted RBP23.05■■□□□ 1.28
UPK3B-203ENST00000394849 OTUD7AQ8TE49 926 aaPredicted RBP23.05■■□□□ 1.28
UPK3B-203ENST00000394849 MRPL38Q96DV4 380 aaKnown RBP23.05■■□□□ 1.28
UPK3B-203ENST00000394849 KCNH6Q9H252 994 aa23.05■■□□□ 1.28
UPK3B-203ENST00000394849 GRXCR2A6NFK2 248 aa23.04■■□□□ 1.28
UPK3B-203ENST00000394849 HAS3O00219 553 aa23.04■■□□□ 1.28
UPK3B-203ENST00000394849 CSPP1Q1MSJ5 1256 aa23.04■■□□□ 1.28
UPK3B-203ENST00000394849 KIAA0753Q2KHM9 967 aa23.04■■□□□ 1.28
UPK3B-203ENST00000394849 TIGD5Q53EQ6 642 aa23.04■■□□□ 1.28
UPK3B-203ENST00000394849 ZNF618Q5T7W0 954 aa23.04■■□□□ 1.28
UPK3B-203ENST00000394849 TAAR1Q96RJ0 339 aa23.04■■□□□ 1.28
UPK3B-203ENST00000394849 MRPL11Q9Y3B7 192 aaKnown RBP23.04■■□□□ 1.28
UPK3B-203ENST00000394849 MICAL3Q7RTP6 2002 aa23.03■■□□□ 1.28
UPK3B-203ENST00000394849 PPFIA4O75335 1185 aa23.03■■□□□ 1.28
UPK3B-203ENST00000394849 HTRA4P83105 476 aaPredicted RBP23.03■■□□□ 1.28
UPK3B-203ENST00000394849 CDC37Q16543 378 aaPredicted RBP23.03■■□□□ 1.28
UPK3B-203ENST00000394849 TRIM71Q2Q1W2 868 aaKnown RBP23.03■■□□□ 1.28
UPK3B-203ENST00000394849 ARHGEF16Q5VV41 709 aa23.03■■□□□ 1.28
UPK3B-203ENST00000394849 KCNV1Q6PIU1 500 aa23.03■■□□□ 1.28
UPK3B-203ENST00000394849 ESR2Q92731 530 aa23.03■■□□□ 1.28
UPK3B-203ENST00000394849 ALG1Q9BT22 464 aa23.03■■□□□ 1.28
UPK3B-203ENST00000394849 MRVI1Q9Y6F6 885 aa23.03■■□□□ 1.28
UPK3B-203ENST00000394849 MYH7BA7E2Y1 1941 aa23.02■■□□□ 1.28
UPK3B-203ENST00000394849 HSPD1P10809 573 aaKnown RBP23.02■■□□□ 1.28
UPK3B-203ENST00000394849 HOXD8P13378 290 aaPredicted RBP23.02■■□□□ 1.28
UPK3B-203ENST00000394849 TRAF7Q6Q0C0 670 aa23.02■■□□□ 1.28
UPK3B-203ENST00000394849 DHX37Q8IY37 1157 aaKnown RBP23.02■■□□□ 1.28
UPK3B-203ENST00000394849 NEK9Q8TD19 979 aa23.02■■□□□ 1.28
UPK3B-203ENST00000394849 SP7Q8TDD2 431 aaPredicted RBP23.02■■□□□ 1.28
UPK3B-203ENST00000394849 TCTN1Q2MV58 587 aa23.01■■□□□ 1.27
UPK3B-203ENST00000394849 FAM117BQ6P1L5 589 aa23.01■■□□□ 1.27
UPK3B-203ENST00000394849 C17orf80Q9BSJ5 609 aa23.01■■□□□ 1.27
UPK3B-203ENST00000394849 COL20A1Q9P218 1284 aa23.01■■□□□ 1.27
UPK3B-203ENST00000394849 PRKAG3Q9UGI9 489 aa23.01■■□□□ 1.27
UPK3B-203ENST00000394849 MYH6P13533 1939 aa23.01■■□□□ 1.27
UPK3B-203ENST00000394849 SALL3Q9BXA9 1300 aa23.01■■□□□ 1.27
UPK3B-203ENST00000394849 RSPH10B2B2RC85 870 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms