RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 CNOT10Q9H9A5 744 aaKnown RBP8.05□□□□□ -1.12
SYNE2-205ENST00000394768 SUFUQ9UMX1 484 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 COPB2P35606 906 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 CC2D2BQ6DHV5 1058 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 SLITRK6Q9H5Y7 841 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 NDE1Q9NXR1 346 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 TRIM33Q9UPN9 1127 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 DPYSL4O14531 572 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 BRD1O95696 1058 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 NR1H4Q96RI1 486 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-205ENST00000394768 SEPT9Q9UHD8 586 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-205ENST00000394768 DLATP10515 647 aaKnown RBP8.05□□□□□ -1.12
SYNE2-205ENST00000394768 TCP10Q12799 353 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 ARHGAP44Q17R89 818 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 OR8K1Q8NGG5 319 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 RBM46Q8TBY0 533 aaKnown RBP8.05□□□□□ -1.12
SYNE2-205ENST00000394768 ARMT1Q9H993 441 aa8.05□□□□□ -1.12
SYNE2-205ENST00000394768 UBXN8O00124 270 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 APBA3O96018 575 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 OR52Z1P0C646 297 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 FANCCQ00597 558 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 LRRC31Q6UY01 552 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 SRPK1Q96SB4 655 aaKnown RBP8.04□□□□□ -1.12
SYNE2-205ENST00000394768 TRIM54Q9BYV2 358 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 ASPSCR1Q9BZE9 553 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 MYO1DO94832 1006 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 MYL7Q01449 175 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 SLC39A6Q13433 755 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 MEI1Q5TIA1 1274 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 TYW1BQ6NUM6 668 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 USP40Q9NVE5 1235 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 RNF14Q9UBS8 474 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 GCP02774 474 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 SOX5P35711 763 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 GCKRQ14397 625 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 TAF1BQ53T94 588 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-205ENST00000394768 TSHZ3Q63HK5 1081 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 KLHL7Q8IXQ5 586 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 BLIDQ8IZY5 108 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 U2AF1L4Q8WU68 220 aaKnown RBP8.04□□□□□ -1.12
SYNE2-205ENST00000394768 TOPORSQ9NS56 1045 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-205ENST00000394768 SESTD1Q86VW0 696 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 MRPL50Q8N5N7 158 aaKnown RBP8.04□□□□□ -1.12
SYNE2-205ENST00000394768 FAM167AQ96KS9 214 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 USP21Q9UK80 565 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 KCNJ18B7U540 433 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 LMNAP02545 664 aaKnown RBP8.04□□□□□ -1.12
SYNE2-205ENST00000394768 GSNP06396 782 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 ALAS1P13196 640 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 KCNJ12Q14500 433 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 FBXO41Q8TF61 875 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 TCP11Q8WWU5 503 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 SCOCQ9UIL1 159 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 ADGRF5Q8IZF2 1346 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 SNX1Q13596 522 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 ABCB5Q2M3G0 1257 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 PPM1KQ8N3J5 372 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 TGFBRAP1Q8WUH2 860 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 NFE2L3Q9Y4A8 694 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 RAD51Q06609 339 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 DYRK4Q9NR20 520 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 KRT82Q9NSB4 513 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 PCDHB4Q9Y5E5 795 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 SYCP2Q9BX26 1530 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 FAM83GA6ND36 823 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 ZNF18P17022 549 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 SAT1P21673 171 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 KCNA4P22459 653 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 MSH2P43246 934 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 E4F1Q66K89 784 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-205ENST00000394768 RNF217Q8TC41 542 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 BCS1LQ9Y276 419 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 IL1RL1Q01638 556 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 LRCH2Q5VUJ6 765 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 PPP4R3CPQ6ZMV5 832 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 FOPNLQ96NB1 174 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 HAUS4Q9H6D7 363 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 MYO5CQ9NQX4 1742 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 UGGT2Q9NYU1 1516 aa8.04□□□□□ -1.12
SYNE2-205ENST00000394768 LRRD1A4D1F6 860 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 KCNK3O14649 394 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 MOCS3O95396 460 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 KRT4P19013 534 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 EEF1GP26641 437 aaKnown RBP8.03□□□□□ -1.12
SYNE2-205ENST00000394768 KYAT1Q16773 422 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 ARHGAP27Q6ZUM4 889 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 ANGPTL2Q9UKU9 493 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 ABCC12Q96J65 1359 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 XDHP47989 1333 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 HNRNPRO43390 633 aaKnown RBP8.03□□□□□ -1.12
SYNE2-205ENST00000394768 CHMLP26374 656 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 STAT2P52630 851 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 PPARAQ07869 468 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 SFSWAPQ12872 951 aaKnown RBP8.03□□□□□ -1.12
SYNE2-205ENST00000394768 MMS22LQ6ZRQ5 1243 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 PCGF5Q86SE9 256 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 RFX6Q8HWS3 928 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 TRIM4Q9C037 500 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 IQANK1A0A1B0GTG1 560 aa8.03□□□□□ -1.12
SYNE2-205ENST00000394768 PRPSAP2O60256 369 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms