RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 CCZ1P86791 482 aaPredicted RBP6.27□□□□□ -1.41
RFFL-202ENST00000394597 E4F1Q66K89 784 aaPredicted RBP6.27□□□□□ -1.41
RFFL-202ENST00000394597 RASGRP4Q8TDF6 673 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 L2HGDHQ9H9P8 463 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 GOLGA8KD6RF30 607 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 ASNSP08243 561 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 TECP42680 631 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 SF3A3Q12874 501 aaKnown RBP eCLIP6.26□□□□□ -1.411e-6■■■■■ 39.1
RFFL-202ENST00000394597 SEPT2Q15019 361 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 SYDE2Q5VT97 1194 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 TRIM68Q6AZZ1 485 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 CCDC65Q8IXS2 484 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 RNF168Q8IYW5 571 aaPredicted RBP6.26□□□□□ -1.41
RFFL-202ENST00000394597 SYCP3Q8IZU3 236 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 IGSF22Q8N9C0 903 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 RNF217Q8TC41 542 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 CSRNP2Q9H175 543 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 SPON1Q9HCB6 807 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 HERC5Q9UII4 1024 aaKnown RBP6.26□□□□□ -1.41
RFFL-202ENST00000394597 PCDHA12Q9UN75 941 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 PCDHB6Q9Y5E3 794 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 SRPRBQ9Y5M8 271 aaKnown RBP6.26□□□□□ -1.41
RFFL-202ENST00000394597 ATRNO75882 1429 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 CTDNEP1O95476 244 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 EEF2P13639 858 aaKnown RBP6.26□□□□□ -1.41
RFFL-202ENST00000394597 RASA1P20936 1047 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 RANBP1P43487 201 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 USP14P54578 494 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 PDE4DQ08499 809 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 PNOCQ13519 176 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 CRY2Q49AN0 593 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 CCDC122Q5T0U0 273 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 KCTD16Q68DU8 428 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 NSMFQ6X4W1 530 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 CACNA2D4Q7Z3S7 1137 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 MCF2L2Q86YR7 1114 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 EGFL6Q8IUX8 553 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 FBXL16Q8N461 479 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 ALS2CR12Q96Q35 445 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 HINFPQ9BQA5 517 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 AGXT2Q9BYV1 514 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 MTFR1LQ9H019 292 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 SENP2Q9HC62 589 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 KLC4Q9NSK0 619 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 KCNG1Q9UIX4 513 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 TPX2Q9ULW0 747 aaKnown RBP6.26□□□□□ -1.41
RFFL-202ENST00000394597 NHSL1Q5SYE7 1610 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 AFDNP55196 1824 aaKnown RBP6.26□□□□□ -1.41
RFFL-202ENST00000394597 LRRD1A4D1F6 860 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 FAM196BA6NMK8 535 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 STX10O60499 249 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 FLOT1O75955 427 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 ALAS1P13196 640 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 STAT2P52630 851 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 RWDD2BP57060 319 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 TBC1D10BQ4KMP7 808 aaPredicted RBP6.26□□□□□ -1.41
RFFL-202ENST00000394597 EAPPQ56P03 285 aaPredicted RBP6.26□□□□□ -1.41
RFFL-202ENST00000394597 SWT1Q5T5J6 900 aaKnown RBP6.26□□□□□ -1.41
RFFL-202ENST00000394597 NCAPH2Q6IBW4 605 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 CNNM4Q6P4Q7 775 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 CNGA4Q8IV77 575 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 SRBD1Q8N5C6 995 aaKnown RBP6.26□□□□□ -1.41
RFFL-202ENST00000394597 TBCKQ8TEA7 893 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 FBF1Q8TES7 1133 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 SYMPKQ92797 1274 aaKnown RBP6.26□□□□□ -1.41
RFFL-202ENST00000394597 RTFDC1Q9BY42 306 aaPredicted RBP6.26□□□□□ -1.41
RFFL-202ENST00000394597 TRIM4Q9C037 500 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 MTMR4Q9NYA4 1195 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 DDX25Q9UHL0 483 aaKnown RBP6.26□□□□□ -1.41
RFFL-202ENST00000394597 HPS5Q9UPZ3 1129 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 PSMD14O00487 310 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 ZMYND10O75800 440 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 FAM13AO94988 1023 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 MYCLP12524 364 aaPredicted RBP6.26□□□□□ -1.41
RFFL-202ENST00000394597 FDPSP14324 419 aaKnown RBP6.26□□□□□ -1.41
RFFL-202ENST00000394597 PAX7P23759 505 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 ATP11AP98196 1134 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 PTPN21Q16825 1174 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 NBPF20Q3BBV1 942 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 LONRF3Q496Y0 759 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 CAPRIN2Q6IMN6 1127 aaKnown RBP6.26□□□□□ -1.41
RFFL-202ENST00000394597 RCSD1Q6JBY9 416 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 FOXR1Q6PIV2 292 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 LRRC31Q6UY01 552 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 FAM160B2Q86V87 743 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 SLFN12Q8IYM2 578 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 CACNA2D3Q8IZS8 1091 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 TCP11Q8WWU5 503 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 STAMQ92783 540 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 MAP3K14Q99558 947 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 FUT8Q9BYC5 575 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 NT5C3AQ9H0P0 336 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 CD248Q9HCU0 757 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 HOMER2Q9NSB8 354 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 SAMD15Q9P1V8 674 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 DNM3Q9UQ16 869 aa6.26□□□□□ -1.41
RFFL-202ENST00000394597 GUCY1A2P33402 732 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 CYLC1P35663 651 aaPredicted RBP6.25□□□□□ -1.41
RFFL-202ENST00000394597 POTEAQ6S8J7 498 aa6.25□□□□□ -1.41
RFFL-202ENST00000394597 CCDC170Q8IYT3 715 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms