RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 CHUKO15111 745 aa18.11■□□□□ 0.49
EFEMP1-202ENST00000394555 TMOD1P28289 359 aa18.11■□□□□ 0.49
EFEMP1-202ENST00000394555 MAN2A1Q16706 1144 aa18.11■□□□□ 0.49
EFEMP1-202ENST00000394555 BAP1Q92560 729 aa18.11■□□□□ 0.49
EFEMP1-202ENST00000394555 SLC40A1Q9NP59 571 aa18.11■□□□□ 0.49
EFEMP1-202ENST00000394555 FLT1P17948 1338 aa18.11■□□□□ 0.49
EFEMP1-202ENST00000394555 ATXN2Q99700 1313 aaKnown RBP18.11■□□□□ 0.49
EFEMP1-202ENST00000394555 DUOX1Q9NRD9 1551 aa18.1■□□□□ 0.49
EFEMP1-202ENST00000394555 DOCK2Q92608 1830 aa18.1■□□□□ 0.49
EFEMP1-202ENST00000394555 DDX42Q86XP3 938 aaKnown RBP eCLIP18.1■□□□□ 0.49
EFEMP1-202ENST00000394555 ZNF384Q8TF68 577 aa18.1■□□□□ 0.49
EFEMP1-202ENST00000394555 CYFIP2Q96F07 1278 aa18.1■□□□□ 0.49
EFEMP1-202ENST00000394555 SUFUQ9UMX1 484 aa18.1■□□□□ 0.49
EFEMP1-202ENST00000394555 HMGB1P1B2RPK0 211 aaPredicted RBP18.1■□□□□ 0.49
EFEMP1-202ENST00000394555 KLRC1P26715 233 aa18.1■□□□□ 0.49
EFEMP1-202ENST00000394555 DDR1Q08345 913 aa18.1■□□□□ 0.49
EFEMP1-202ENST00000394555 CCDC152Q4G0S7 254 aa18.1■□□□□ 0.49
EFEMP1-202ENST00000394555 PDXDC1Q6P996 788 aa18.1■□□□□ 0.49
EFEMP1-202ENST00000394555 PNMA1Q8ND90 353 aa18.1■□□□□ 0.49
EFEMP1-202ENST00000394555 C7orf25Q9BPX7 421 aa18.1■□□□□ 0.49
EFEMP1-202ENST00000394555 KANSL2Q9H9L4 492 aa18.1■□□□□ 0.49
EFEMP1-202ENST00000394555 ADAMTSL3P82987 1691 aa18.1■□□□□ 0.49
EFEMP1-202ENST00000394555 PJA2O43164 708 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 GOLGA8HP0CJ92 632 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 AMPD3Q01432 767 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 CENPPQ6IPU0 288 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 RCSD1Q6JBY9 416 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 ZNF34Q8IZ26 560 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 JAG2Q9Y219 1238 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 GCOM1H8Y6P7 765 aaPredicted RBP18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 OR52Z1P0C646 297 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 MYZAPP0CAP1 466 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 SMTNP53814 917 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 TFAP4Q01664 338 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 SF3A3Q12874 501 aaKnown RBP eCLIP18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 YTHDF3Q7Z739 585 aaKnown RBP18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 TBC1D5Q92609 795 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 SCLT1Q96NL6 688 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 GOLPH3Q9H4A6 298 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 TSKSQ9UJT2 592 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 SLC9C1Q4G0N8 1177 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 RNF10Q8N5U6 811 aaKnown RBP18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 WHAMMQ8TF30 809 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 PACSIN1Q9BY11 444 aa18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 DCP1AQ9NPI6 582 aaPredicted RBP18.09■□□□□ 0.49
EFEMP1-202ENST00000394555 FGRP09769 529 aa18.08■□□□□ 0.49
EFEMP1-202ENST00000394555 TXKP42681 527 aa18.08■□□□□ 0.49
EFEMP1-202ENST00000394555 CDC37Q16543 378 aaPredicted RBP18.08■□□□□ 0.49
EFEMP1-202ENST00000394555 KIAA0753Q2KHM9 967 aa18.08■□□□□ 0.49
EFEMP1-202ENST00000394555 SPRED3Q2MJR0 410 aa18.08■□□□□ 0.49
EFEMP1-202ENST00000394555 ASTE1Q2TB18 679 aaPredicted RBP18.08■□□□□ 0.49
EFEMP1-202ENST00000394555 HGSNATQ68CP4 663 aa18.08■□□□□ 0.49
EFEMP1-202ENST00000394555 GLIS3Q8NEA6 775 aa18.08■□□□□ 0.49
EFEMP1-202ENST00000394555 CUEDC2Q9H467 287 aa18.08■□□□□ 0.49
EFEMP1-202ENST00000394555 PDHBP11177 359 aa18.08■□□□□ 0.48
EFEMP1-202ENST00000394555 POLR2FP61218 127 aaKnown RBP18.08■□□□□ 0.48
EFEMP1-202ENST00000394555 IQCDQ96DY2 449 aa18.08■□□□□ 0.48
EFEMP1-202ENST00000394555 TMBIM4Q9HC24 238 aa18.08■□□□□ 0.48
EFEMP1-202ENST00000394555 KCNK3O14649 394 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 CTNNA1P35221 906 aaKnown RBP18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 HSD17B3P37058 310 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 QPCTQ16769 361 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 SFMBT2Q5VUG0 894 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 SV2BQ7L1I2 683 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 MREGQ8N565 214 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 CALML4Q96GE6 196 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 RNF14Q9UBS8 474 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 DDX20Q9UHI6 824 aaKnown RBP18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 ADAMTS1Q9UHI8 967 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 CEP83Q9Y592 693 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 GMNCA6NCL1 334 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 M0R2N6 131 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 NF2P35240 595 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 NEDD9Q14511 834 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 EP400NLQ6ZTU2 488 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 DNAAF5Q86Y56 855 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 CD302Q8IX05 232 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 UBLCP1Q8WVY7 318 aaPredicted RBP18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 N4BP2L2Q92802 583 aaPredicted RBP18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 FAM212AQ96EL1 285 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 AP1M1Q9BXS5 423 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 HAUS2Q9NVX0 235 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 MCM9Q9NXL9 1143 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 MYMKA6NI61 221 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 ORC4O43929 436 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 RASSF9O75901 435 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 PCP11498 1178 aaKnown RBP18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 ERVK-9P63128 1117 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 TNNC1P63316 161 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 TAF4BQ92750 862 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 SH3GLB2Q9NR46 395 aa18.07■□□□□ 0.48
EFEMP1-202ENST00000394555 USP17L3A6NCW0 530 aa18.06■□□□□ 0.48
EFEMP1-202ENST00000394555 USP17L4A6NCW7 530 aa18.06■□□□□ 0.48
EFEMP1-202ENST00000394555 CYTH3O43739 400 aa18.06■□□□□ 0.48
EFEMP1-202ENST00000394555 TLR2O60603 784 aa18.06■□□□□ 0.48
EFEMP1-202ENST00000394555 USP17L8P0C7I0 530 aa18.06■□□□□ 0.48
EFEMP1-202ENST00000394555 KCNMA1Q12791 1236 aa18.06■□□□□ 0.48
EFEMP1-202ENST00000394555 RAPGEF1Q13905 1077 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms