RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 MEFVO15553 781 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-204ENST00000394164 KRT14P02533 472 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 FCER1AP12319 257 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 AKR1B1P15121 316 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 PLCG1P19174 1290 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 KRT9P35527 623 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 SF3B2Q13435 895 aaKnown RBP11.03□□□□□ -0.64
PSEN1-204ENST00000394164 NAA25Q14CX7 972 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 UBE2SQ16763 222 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 TTMPQ5BVD1 217 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 TTBK2Q6IQ55 1244 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 CCNI2Q6ZMN8 369 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-204ENST00000394164 EGFL6Q8IUX8 553 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 FNBP4Q8N3X1 1017 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-204ENST00000394164 JAKMIP2Q96AA8 810 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 RBM17Q96I25 401 aaKnown RBP11.03□□□□□ -0.64
PSEN1-204ENST00000394164 TRIM47Q96LD4 638 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 BTAF1O14981 1849 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 CASZ1Q86V15 1759 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 MACROD2A1Z1Q3 448 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 CHUKO15111 745 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 KLK7P49862 253 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 SNAP25P60880 206 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 SAMD1Q6SPF0 538 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-204ENST00000394164 TSEN2Q8NCE0 465 aaKnown RBP11.03□□□□□ -0.64
PSEN1-204ENST00000394164 ABHD10Q9NUJ1 306 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 EHD2Q9NZN4 543 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 PALM3A6NDB9 673 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-204ENST00000394164 TNNI2P48788 182 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 RBM5P52756 815 aaKnown RBP eCLIP11.03□□□□□ -0.64
PSEN1-204ENST00000394164 COPB1P53618 953 aaKnown RBP11.03□□□□□ -0.64
PSEN1-204ENST00000394164 ASIC1P78348 528 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 CDKAL1Q5VV42 579 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 KCTD1Q719H9 257 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 TRAPPC11Q7Z392 1133 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 CNGA4Q8IV77 575 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 FAXDC2Q96IV6 333 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 NAA15Q9BXJ9 866 aaKnown RBP11.03□□□□□ -0.64
PSEN1-204ENST00000394164 DDX4Q9NQI0 724 aaKnown RBP11.03□□□□□ -0.64
PSEN1-204ENST00000394164 DMGDHQ9UI17 866 aaKnown RBP11.03□□□□□ -0.64
PSEN1-204ENST00000394164 DAGLAQ9Y4D2 1042 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 DUSP10Q9Y6W6 482 aa11.03□□□□□ -0.64
PSEN1-204ENST00000394164 TAL1P17542 331 aaPredicted RBP11.02□□□□□ -0.65
PSEN1-204ENST00000394164 LONP1P36776 959 aaKnown RBP11.02□□□□□ -0.65
PSEN1-204ENST00000394164 PEX19P40855 299 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 CDR1P51861 262 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 RHBDL3P58872 404 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 TUBB2AQ13885 445 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 CCDC40Q4G0X9 1142 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 CABP7Q86V35 215 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 TUBB2BQ9BVA1 445 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 DBNDD1Q9H9R9 158 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 SLC39A2Q9NP94 309 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 REXO2Q9Y3B8 237 aaKnown RBP11.02□□□□□ -0.65
PSEN1-204ENST00000394164 POTEMA6NI47 508 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 TDP2O95551 362 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 IDEP14735 1019 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 CXCR5P32302 372 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 GNAQP50148 359 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 DNA2P51530 1060 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 HDLBPQ00341 1268 aaKnown RBP11.02□□□□□ -0.65
PSEN1-204ENST00000394164 CCDC96Q2M329 555 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 TCP11X2Q5H9J9 407 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 ZNF658Q5TYW1 1059 aaPredicted RBP11.02□□□□□ -0.65
PSEN1-204ENST00000394164 B4GALNT4Q76KP1 1039 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 KIAA1328Q86T90 577 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 CCDC114Q96M63 670 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 LRRC1Q9BTT6 524 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 TCP11L1Q9NUJ3 509 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 LTBP4Q8N2S1 1624 aa11.02□□□□□ -0.65
PSEN1-204ENST00000394164 GPR75-ASB3A0A0A6YYF3 556 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 B4DLN1 442 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 MYO1BO43795 1136 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 MARCH6O60337 910 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 TUBBP07437 444 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 CDC25CP30307 473 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 TRAPPC10P48553 1259 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 TUBB4BP68371 445 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 PDE4DQ08499 809 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 NONOQ15233 471 aaKnown RBP eCLIP11.01□□□□□ -0.65
PSEN1-204ENST00000394164 CYP26C1Q6V0L0 522 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 FAM43BQ6ZT52 329 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-204ENST00000394164 TMTC1Q8IUR5 882 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 ZFPM1Q8IX07 1006 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 CCDC13Q8IYE1 715 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 ELOA2Q8IYF1 753 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-204ENST00000394164 CERS5Q8N5B7 392 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 SMCR8Q8TEV9 937 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-204ENST00000394164 TBC1D31Q96DN5 1066 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 RNPC3Q96LT9 517 aaKnown RBP11.01□□□□□ -0.65
PSEN1-204ENST00000394164 SLC40A1Q9NP59 571 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 PPANQ9NQ55 473 aaKnown RBP11.01□□□□□ -0.65
PSEN1-204ENST00000394164 USP40Q9NVE5 1235 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 DDX20Q9UHI6 824 aaKnown RBP11.01□□□□□ -0.65
PSEN1-204ENST00000394164 PPP1R12AO14974 1030 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-204ENST00000394164 ATP2B4P23634 1241 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 HPDP32754 393 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-204ENST00000394164 NFIAQ12857 509 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 STK4Q13043 487 aa11.01□□□□□ -0.65
PSEN1-204ENST00000394164 NAA35Q5VZE5 725 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms