RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 ITGA7Q13683 1181 aa35.45■■■■□ 3.27
CMTM4-202ENST00000394106 BADQ92934 168 aa35.45■■■■□ 3.27
CMTM4-202ENST00000394106 BRF1Q92994 677 aa35.45■■■■□ 3.27
CMTM4-202ENST00000394106 POLR3EQ9NVU0 708 aa35.45■■■■□ 3.27
CMTM4-202ENST00000394106 CNTNAP5Q8WYK1 1306 aa35.44■■■■□ 3.26
CMTM4-202ENST00000394106 CCND2P30279 289 aa35.44■■■■□ 3.26
CMTM4-202ENST00000394106 USP17L6PQ6QN14 398 aa35.44■■■■□ 3.26
CMTM4-202ENST00000394106 HEATR3Q7Z4Q2 680 aa35.44■■■■□ 3.26
CMTM4-202ENST00000394106 ZFP91Q96JP5 570 aaPredicted RBP35.44■■■■□ 3.26
CMTM4-202ENST00000394106 MRVI1Q9Y6F6 885 aa35.44■■■■□ 3.26
CMTM4-202ENST00000394106 KIAA0355O15063 1070 aa35.43■■■■□ 3.26
CMTM4-202ENST00000394106 VSIG10LQ86VR7 867 aa35.43■■■■□ 3.26
CMTM4-202ENST00000394106 TDHQ8IZJ6 230 aa35.43■■■■□ 3.26
CMTM4-202ENST00000394106 GPKOWQ92917 476 aaPredicted RBP eCLIP35.43■■■■□ 3.26
CMTM4-202ENST00000394106 RANBP2P49792 3224 aaKnown RBP35.42■■■■□ 3.26
CMTM4-202ENST00000394106 GH1P01241 217 aa35.42■■■■□ 3.26
CMTM4-202ENST00000394106 RAG1P15918 1043 aa35.42■■■■□ 3.26
CMTM4-202ENST00000394106 PURAQ00577 322 aaKnown RBP35.42■■■■□ 3.26
CMTM4-202ENST00000394106 DDX41Q9UJV9 622 aaKnown RBP35.42■■■■□ 3.26
CMTM4-202ENST00000394106 GRIN2DO15399 1336 aa35.41■■■■□ 3.26
CMTM4-202ENST00000394106 A6NJR5 290 aa35.41■■■■□ 3.26
CMTM4-202ENST00000394106 TLR3O15455 904 aaKnown RBP35.41■■■■□ 3.26
CMTM4-202ENST00000394106 ITGB8P26012 769 aa35.41■■■■□ 3.26
CMTM4-202ENST00000394106 CDC27P30260 824 aa35.41■■■■□ 3.26
CMTM4-202ENST00000394106 RCAN1P53805 252 aa35.41■■■■□ 3.26
CMTM4-202ENST00000394106 FAM126BQ8IXS8 530 aa35.41■■■■□ 3.26
CMTM4-202ENST00000394106 PSTPIP2Q9H939 334 aa35.41■■■■□ 3.26
CMTM4-202ENST00000394106 MEIS2O14770 477 aa35.4■■■■□ 3.26
CMTM4-202ENST00000394106 RGS20O76081 388 aa35.4■■■■□ 3.26
CMTM4-202ENST00000394106 METAP2P50579 478 aaKnown RBP eCLIP35.4■■■■□ 3.26
CMTM4-202ENST00000394106 ARHGAP1Q07960 439 aa35.4■■■■□ 3.26
CMTM4-202ENST00000394106 SLC43A3Q8NBI5 491 aa35.4■■■■□ 3.26
CMTM4-202ENST00000394106 AFG1LQ8WV93 481 aa35.4■■■■□ 3.26
CMTM4-202ENST00000394106 MTG1Q9BT17 334 aaPredicted RBP35.4■■■■□ 3.26
CMTM4-202ENST00000394106 FAM217BQ9NTX9 383 aaPredicted RBP35.4■■■■□ 3.26
CMTM4-202ENST00000394106 PIK3CDO00329 1044 aa35.39■■■■□ 3.26
CMTM4-202ENST00000394106 FUT2Q10981 343 aa35.39■■■■□ 3.26
CMTM4-202ENST00000394106 V9GY48 417 aaPredicted RBP35.39■■■■□ 3.26
CMTM4-202ENST00000394106 FRMPD4Q14CM0 1322 aa35.38■■■■□ 3.25
CMTM4-202ENST00000394106 RUFY3Q7L099 469 aa35.38■■■■□ 3.25
CMTM4-202ENST00000394106 TBX21Q9UL17 535 aa35.38■■■■□ 3.25
CMTM4-202ENST00000394106 KPNA6O60684 536 aa35.37■■■■□ 3.25
CMTM4-202ENST00000394106 ADD1P35611 737 aaKnown RBP35.37■■■■□ 3.25
CMTM4-202ENST00000394106 WWC2Q6AWC2 1192 aa35.37■■■■□ 3.25
CMTM4-202ENST00000394106 CCDC196A0A1B0GTZ2 297 aa35.36■■■■□ 3.25
CMTM4-202ENST00000394106 SORBS3O60504 671 aa35.36■■■■□ 3.25
CMTM4-202ENST00000394106 UBE2SQ16763 222 aa35.36■■■■□ 3.25
CMTM4-202ENST00000394106 KCNV1Q6PIU1 500 aa35.36■■■■□ 3.25
CMTM4-202ENST00000394106 FBXL16Q8N461 479 aa35.36■■■■□ 3.25
CMTM4-202ENST00000394106 SEZ6LQ9BYH1 1024 aa35.36■■■■□ 3.25
CMTM4-202ENST00000394106 AGXT2Q9BYV1 514 aa35.36■■■■□ 3.25
CMTM4-202ENST00000394106 ZSWIM6Q9HCJ5 1215 aa35.36■■■■□ 3.25
CMTM4-202ENST00000394106 CYP46A1Q9Y6A2 500 aa35.36■■■■□ 3.25
CMTM4-202ENST00000394106 CD4P01730 458 aa35.35■■■■□ 3.25
CMTM4-202ENST00000394106 MMP3P08254 477 aa35.35■■■■□ 3.25
CMTM4-202ENST00000394106 NAPAP54920 295 aa35.35■■■■□ 3.25
CMTM4-202ENST00000394106 MRPS9P82933 396 aaKnown RBP35.35■■■■□ 3.25
CMTM4-202ENST00000394106 DHX37Q8IY37 1157 aaKnown RBP35.35■■■■□ 3.25
CMTM4-202ENST00000394106 MYH7BA7E2Y1 1941 aa35.35■■■■□ 3.25
CMTM4-202ENST00000394106 SOX1O00570 391 aaPredicted RBP35.34■■■■□ 3.25
CMTM4-202ENST00000394106 CHMP4BP1P59074 171 aa35.34■■■■□ 3.25
CMTM4-202ENST00000394106 LAMC2Q13753 1193 aa35.34■■■■□ 3.25
CMTM4-202ENST00000394106 TRPV6Q9H1D0 765 aa35.34■■■■□ 3.25
CMTM4-202ENST00000394106 RTEL1Q9NZ71 1219 aa35.34■■■■□ 3.25
CMTM4-202ENST00000394106 TIMP1P01033 207 aa35.33■■■■□ 3.25
CMTM4-202ENST00000394106 FAM47CQ5HY64 1035 aa35.33■■■■□ 3.25
CMTM4-202ENST00000394106 PPP1R13LQ8WUF5 828 aa35.33■■■■□ 3.25
CMTM4-202ENST00000394106 EMID1Q96A84 441 aaPredicted RBP35.33■■■■□ 3.25
CMTM4-202ENST00000394106 UPF3BQ9BZI7 483 aaKnown RBP35.33■■■■□ 3.25
CMTM4-202ENST00000394106 PPP1R12CQ9BZL4 782 aa35.33■■■■□ 3.25
CMTM4-202ENST00000394106 B4GALT4O60513 344 aa35.32■■■■□ 3.24
CMTM4-202ENST00000394106 STAM2O75886 525 aa35.32■■■■□ 3.24
CMTM4-202ENST00000394106 FPGSQ05932 587 aa35.32■■■■□ 3.24
CMTM4-202ENST00000394106 NBPF20Q3BBV1 942 aa35.32■■■■□ 3.24
CMTM4-202ENST00000394106 GNPTABQ3T906 1256 aa35.32■■■■□ 3.24
CMTM4-202ENST00000394106 ALDH8A1Q9H2A2 487 aaPredicted RBP35.32■■■■□ 3.24
CMTM4-202ENST00000394106 SCN10AQ9Y5Y9 1956 aa35.31■■■■□ 3.24
CMTM4-202ENST00000394106 GGPS1O95749 300 aa35.31■■■■□ 3.24
CMTM4-202ENST00000394106 TGFB3P10600 412 aa35.31■■■■□ 3.24
CMTM4-202ENST00000394106 UBA1P22314 1058 aaKnown RBP35.31■■■■□ 3.24
CMTM4-202ENST00000394106 SP2Q02086 613 aa35.31■■■■□ 3.24
CMTM4-202ENST00000394106 CELF3Q5SZQ8 465 aaKnown RBP35.31■■■■□ 3.24
CMTM4-202ENST00000394106 PCNX4Q63HM2 1172 aa35.31■■■■□ 3.24
CMTM4-202ENST00000394106 TYW1BQ6NUM6 668 aa35.31■■■■□ 3.24
CMTM4-202ENST00000394106 TM6SF1Q9BZW5 370 aa35.31■■■■□ 3.24
CMTM4-202ENST00000394106 NID2Q14112 1375 aa35.3■■■■□ 3.24
CMTM4-202ENST00000394106 SPDYE3A6NKU9 549 aa35.3■■■■□ 3.24
CMTM4-202ENST00000394106 STXBP3O00186 592 aa35.3■■■■□ 3.24
CMTM4-202ENST00000394106 TOB2Q14106 344 aaPredicted RBP35.3■■■■□ 3.24
CMTM4-202ENST00000394106 DGKDQ16760 1214 aa35.3■■■■□ 3.24
CMTM4-202ENST00000394106 PPP1R18Q6NYC8 613 aa35.3■■■■□ 3.24
CMTM4-202ENST00000394106 PPTC7Q8NI37 304 aa35.3■■■■□ 3.24
CMTM4-202ENST00000394106 LRCH3Q96II8 777 aa35.3■■■■□ 3.24
CMTM4-202ENST00000394106 INPP4AQ96PE3 977 aaPredicted RBP35.3■■■■□ 3.24
CMTM4-202ENST00000394106 hCG_1984214I3L0E3 225 aa35.29■■■■□ 3.24
CMTM4-202ENST00000394106 SHHQ15465 462 aa35.29■■■■□ 3.24
CMTM4-202ENST00000394106 LRIT3Q3SXY7 679 aa35.29■■■■□ 3.24
CMTM4-202ENST00000394106 C9orf50Q5SZB4 431 aa35.29■■■■□ 3.24
CMTM4-202ENST00000394106 MYSM1Q5VVJ2 828 aa35.29■■■■□ 3.24
CMTM4-202ENST00000394106 XRRA1Q6P2D8 792 aa35.29■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms