RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 PARNO95453 639 aaKnown RBP6.56□□□□□ -1.36
NPM1-203ENST00000393820 BPNT1O95861 308 aa6.56□□□□□ -1.36
NPM1-203ENST00000393820 MX1P20591 662 aa6.56□□□□□ -1.36
NPM1-203ENST00000393820 RFC4P35249 363 aa6.56□□□□□ -1.36
NPM1-203ENST00000393820 RBM10P98175 930 aaKnown RBP6.56□□□□□ -1.36
NPM1-203ENST00000393820 PCDH1Q08174 1060 aa6.56□□□□□ -1.36
NPM1-203ENST00000393820 ITPK1Q13572 414 aa6.56□□□□□ -1.36
NPM1-203ENST00000393820 MTERF2Q49AM1 385 aa6.56□□□□□ -1.36
NPM1-203ENST00000393820 CCDC183Q5T5S1 534 aa6.56□□□□□ -1.36
NPM1-203ENST00000393820 LLGL2Q6P1M3 1020 aa6.56□□□□□ -1.36
NPM1-203ENST00000393820 VN1R5Q7Z5H4 357 aa6.56□□□□□ -1.36
NPM1-203ENST00000393820 WFDC8Q8IUA0 241 aa6.56□□□□□ -1.36
NPM1-203ENST00000393820 C19orf47Q8N9M1 422 aaKnown RBP6.56□□□□□ -1.36
NPM1-203ENST00000393820 THAP3Q8WTV1 239 aaPredicted RBP6.56□□□□□ -1.36
NPM1-203ENST00000393820 IRF2BPLQ9H1B7 796 aa6.56□□□□□ -1.36
NPM1-203ENST00000393820 PRDM6Q9NQX0 595 aa6.56□□□□□ -1.36
NPM1-203ENST00000393820 SPTLC3Q9NUV7 552 aa6.56□□□□□ -1.36
NPM1-203ENST00000393820 BABAM1Q9NWV8 329 aa6.56□□□□□ -1.36
NPM1-203ENST00000393820 POLR3KQ9Y2Y1 108 aaPredicted RBP6.56□□□□□ -1.36
NPM1-203ENST00000393820 B2RBV5 119 aa6.55□□□□□ -1.36
NPM1-203ENST00000393820 ATE1O95260 518 aa6.55□□□□□ -1.36
NPM1-203ENST00000393820 PTPRAP18433 802 aa6.55□□□□□ -1.36
NPM1-203ENST00000393820 CDC27P30260 824 aa6.55□□□□□ -1.36
NPM1-203ENST00000393820 HSPA4P34932 840 aa6.55□□□□□ -1.36
NPM1-203ENST00000393820 CABP4P57796 275 aa6.55□□□□□ -1.36
NPM1-203ENST00000393820 UBE2HP62256 183 aa6.55□□□□□ -1.36
NPM1-203ENST00000393820 ZNF252P-AS1Q0IIN9 211 aa6.55□□□□□ -1.36
NPM1-203ENST00000393820 DCTN1Q14203 1278 aa6.55□□□□□ -1.36
NPM1-203ENST00000393820 NOLC1Q14978 699 aaKnown RBP eCLIP6.55□□□□□ -1.364e-67■□□□□ 8.6
NPM1-203ENST00000393820 ZNF423Q2M1K9 1284 aa6.55□□□□□ -1.36
NPM1-203ENST00000393820 C1orf141Q5JVX7 400 aa6.55□□□□□ -1.36
NPM1-203ENST00000393820 SULT6B1Q6IMI4 303 aa6.55□□□□□ -1.36
NPM1-203ENST00000393820 GRIN3AQ8TCU5 1115 aa6.55□□□□□ -1.36
NPM1-203ENST00000393820 CCDC94Q9BW85 323 aaPredicted RBP6.55□□□□□ -1.36
NPM1-203ENST00000393820 ADAM19Q9H013 955 aa6.55□□□□□ -1.36
NPM1-203ENST00000393820 DDX56Q9NY93 547 aaKnown RBP6.55□□□□□ -1.36
NPM1-203ENST00000393820 SOX13Q9UN79 622 aa6.55□□□□□ -1.36
NPM1-203ENST00000393820 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.55□□□□□ -1.36
NPM1-203ENST00000393820 PCDHB14Q9Y5E9 798 aa6.55□□□□□ -1.36
NPM1-203ENST00000393820 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.55□□□□□ -1.36
NPM1-203ENST00000393820 KIF13BQ9NQT8 1826 aa6.54□□□□□ -1.36
NPM1-203ENST00000393820 VIL1P09327 827 aaKnown RBP6.54□□□□□ -1.36
NPM1-203ENST00000393820 GYS1P13807 737 aa6.54□□□□□ -1.36
NPM1-203ENST00000393820 RPL6Q02878 288 aaKnown RBP6.54□□□□□ -1.36
NPM1-203ENST00000393820 PTPN11Q06124 597 aaPredicted RBP6.54□□□□□ -1.36
NPM1-203ENST00000393820 LRRC14Q15048 493 aa6.54□□□□□ -1.36
NPM1-203ENST00000393820 UTP14CQ5TAP6 766 aaKnown RBP6.54□□□□□ -1.36
NPM1-203ENST00000393820 CCDC30Q5VVM6 783 aa6.54□□□□□ -1.36
NPM1-203ENST00000393820 RUFY4Q6ZNE9 571 aa6.54□□□□□ -1.36
NPM1-203ENST00000393820 SPATC1Q76KD6 591 aa6.54□□□□□ -1.36
NPM1-203ENST00000393820 AMIGO3Q86WK7 504 aa6.54□□□□□ -1.36
NPM1-203ENST00000393820 SLC7A3Q8WY07 619 aa6.54□□□□□ -1.36
NPM1-203ENST00000393820 STK31Q9BXU1 1019 aa6.54□□□□□ -1.36
NPM1-203ENST00000393820 PIM2Q9P1W9 311 aa6.54□□□□□ -1.36
NPM1-203ENST00000393820 PRDM4Q9UKN5 801 aa6.54□□□□□ -1.36
NPM1-203ENST00000393820 PPME1Q9Y570 386 aa6.54□□□□□ -1.36
NPM1-203ENST00000393820 PTCH2Q9Y6C5 1203 aa6.54□□□□□ -1.36
NPM1-203ENST00000393820 C10orf71Q711Q0 1435 aa6.54□□□□□ -1.36
NPM1-203ENST00000393820 PXDNLA1KZ92 1463 aa6.54□□□□□ -1.36
NPM1-203ENST00000393820 A0A0A0MRY4 1105 aa6.53□□□□□ -1.36
NPM1-203ENST00000393820 DEAF1O75398 565 aaPredicted RBP6.53□□□□□ -1.36
NPM1-203ENST00000393820 ZSCAN22P10073 491 aaPredicted RBP6.53□□□□□ -1.36
NPM1-203ENST00000393820 ARNTP27540 789 aa6.53□□□□□ -1.36
NPM1-203ENST00000393820 MASP1P48740 699 aa6.53□□□□□ -1.36
NPM1-203ENST00000393820 FSTL1Q12841 308 aa6.53□□□□□ -1.36
NPM1-203ENST00000393820 TAF7LQ5H9L4 462 aa6.53□□□□□ -1.36
NPM1-203ENST00000393820 DNTTIP2Q5QJE6 756 aaKnown RBP6.53□□□□□ -1.36
NPM1-203ENST00000393820 SCARA3Q6AZY7 606 aa6.53□□□□□ -1.36
NPM1-203ENST00000393820 MRM1Q6IN84 353 aaKnown RBP6.53□□□□□ -1.36
NPM1-203ENST00000393820 ZNF530Q6P9A1 599 aaPredicted RBP6.53□□□□□ -1.36
NPM1-203ENST00000393820 RNF214Q8ND24 703 aa6.53□□□□□ -1.36
NPM1-203ENST00000393820 ST13P5Q8NFI4 369 aaPredicted RBP6.53□□□□□ -1.36
NPM1-203ENST00000393820 RTF1Q92541 710 aaKnown RBP6.53□□□□□ -1.36
NPM1-203ENST00000393820 ZSCAN31Q96LW9 406 aaPredicted RBP6.53□□□□□ -1.36
NPM1-203ENST00000393820 DIAPH3Q9NSV4 1193 aa6.53□□□□□ -1.36
NPM1-203ENST00000393820 USP25Q9UHP3 1055 aa6.53□□□□□ -1.36
NPM1-203ENST00000393820 LIMCH1Q9UPQ0 1083 aa6.53□□□□□ -1.36
NPM1-203ENST00000393820 A0A1W2PQH9 124 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 MEIS3P2A8K0S8 358 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 GOLGA6L6A8MZA4 724 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 SOX1O00570 391 aaPredicted RBP6.52□□□□□ -1.36
NPM1-203ENST00000393820 ADCY5O95622 1261 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 TRIM28Q13263 835 aaKnown RBP6.52□□□□□ -1.36
NPM1-203ENST00000393820 GRIK4Q16099 956 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 PPP2R5EQ16537 467 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 DALRD3Q5D0E6 543 aaKnown RBP6.52□□□□□ -1.36
NPM1-203ENST00000393820 SLC4A10Q6U841 1118 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 C6orf15Q6UXA7 325 aaPredicted RBP6.52□□□□□ -1.36
NPM1-203ENST00000393820 MCM10Q7L590 875 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 TTC6Q86TZ1 520 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 PDZD3Q86UT5 571 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 GALNT11Q8NCW6 608 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 SSH3Q8TE77 659 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 RILPL2Q969X0 211 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 ZNF669Q96BR6 464 aaPredicted RBP6.52□□□□□ -1.36
NPM1-203ENST00000393820 CBX8Q9HC52 389 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 PFDN2Q9UHV9 154 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 TSPYL4Q9UJ04 414 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 ZMYM5Q9UJ78 669 aa6.52□□□□□ -1.36
NPM1-203ENST00000393820 PALD1Q9ULE6 856 aa6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms