RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 KLF15Q9UIH9 416 aa12.49□□□□□ -0.41
LAMB1-203ENST00000393560 PNMA6EA0A0J9YXQ4 647 aa12.48□□□□□ -0.41
LAMB1-203ENST00000393560 FBXO21O94952 628 aa12.48□□□□□ -0.41
LAMB1-203ENST00000393560 ZC3H6P61129 1189 aaKnown RBP12.48□□□□□ -0.41
LAMB1-203ENST00000393560 GUCY2DQ02846 1103 aa12.48□□□□□ -0.41
LAMB1-203ENST00000393560 KIF5AQ12840 1032 aa12.48□□□□□ -0.41
LAMB1-203ENST00000393560 NEPROQ6NW34 567 aa12.48□□□□□ -0.41
LAMB1-203ENST00000393560 TPK1Q9H3S4 243 aa12.48□□□□□ -0.41
LAMB1-203ENST00000393560 LEMD3Q9Y2U8 911 aa12.48□□□□□ -0.41
LAMB1-203ENST00000393560 DLG5Q8TDM6 1919 aa12.48□□□□□ -0.41
LAMB1-203ENST00000393560 PPIP5K2O43314 1243 aa12.48□□□□□ -0.41
LAMB1-203ENST00000393560 LLGL2Q6P1M3 1020 aa12.48□□□□□ -0.41
LAMB1-203ENST00000393560 PLPP6Q8IY26 295 aa12.48□□□□□ -0.41
LAMB1-203ENST00000393560 PPFIBP2Q8ND30 876 aa12.48□□□□□ -0.41
LAMB1-203ENST00000393560 VTI1AQ96AJ9 217 aa12.48□□□□□ -0.41
LAMB1-203ENST00000393560 SPATA32Q96LK8 384 aa12.48□□□□□ -0.41
LAMB1-203ENST00000393560 GLT8D2Q9H1C3 349 aa12.48□□□□□ -0.41
LAMB1-203ENST00000393560 AS3MTQ9HBK9 375 aa12.48□□□□□ -0.41
LAMB1-203ENST00000393560 ANKRD62A6NC57 917 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 MAGEA13PA6NCF6 341 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 CNGA3Q16281 694 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 CYP26C1Q6V0L0 522 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 RSPH3Q86UC2 560 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 SESTD1Q86VW0 696 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 GRAMD2AQ8IUY3 354 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 RASEFQ8IZ41 740 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 CYP4X1Q8N118 509 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 CASP10Q92851 521 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 HINFPQ9BQA5 517 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 KIAA1522Q9P206 1035 aaPredicted RBP12.47□□□□□ -0.41
LAMB1-203ENST00000393560 ZNF148Q9UQR1 794 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 TTLL13PA6NNM8 815 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 OXSR1O95747 527 aaPredicted RBP12.47□□□□□ -0.41
LAMB1-203ENST00000393560 ANXA1P04083 346 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 LDHBP07195 334 aaKnown RBP12.47□□□□□ -0.41
LAMB1-203ENST00000393560 PIP4K2BP78356 416 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 GPSM2P81274 684 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 MSLNQ13421 630 aaPredicted RBP12.47□□□□□ -0.41
LAMB1-203ENST00000393560 MORC4Q8TE76 937 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 KIAA1257Q9ULG3 409 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 PLAAQ9Y263 795 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 RGL2O15211 777 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 PLCG2P16885 1265 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 ERCC5P28715 1186 aaPredicted RBP12.47□□□□□ -0.41
LAMB1-203ENST00000393560 TUBA1BP68363 451 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 QPCTQ16769 361 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 TBC1D9BQ66K14 1250 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 TUBA1AQ71U36 451 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 ARHGEF25Q86VW2 580 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 CCNJLQ8IV13 435 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 DQX1Q8TE96 717 aaKnown RBP12.47□□□□□ -0.41
LAMB1-203ENST00000393560 SEC16BQ96JE7 1060 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 GBP5Q96PP8 586 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 SIL1Q9H173 461 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 TUT1Q9H6E5 874 aaKnown RBP12.47□□□□□ -0.41
LAMB1-203ENST00000393560 INTUQ9ULD6 942 aa12.47□□□□□ -0.41
LAMB1-203ENST00000393560 TDRKHQ9Y2W6 561 aaKnown RBP12.47□□□□□ -0.41
LAMB1-203ENST00000393560 ETS2P15036 469 aa12.46□□□□□ -0.41
LAMB1-203ENST00000393560 TBL3Q12788 808 aaKnown RBP12.46□□□□□ -0.41
LAMB1-203ENST00000393560 NNTQ13423 1086 aa12.46□□□□□ -0.41
LAMB1-203ENST00000393560 COL9A3Q14050 684 aaPredicted RBP12.46□□□□□ -0.41
LAMB1-203ENST00000393560 CNPY1Q3B7I2 92 aa12.46□□□□□ -0.41
LAMB1-203ENST00000393560 ZNF569Q5MCW4 686 aa12.46□□□□□ -0.41
LAMB1-203ENST00000393560 NCAPH2Q6IBW4 605 aa12.46□□□□□ -0.41
LAMB1-203ENST00000393560 RUFY4Q6ZNE9 571 aa12.46□□□□□ -0.41
LAMB1-203ENST00000393560 CACNA2D3Q8IZS8 1091 aa12.46□□□□□ -0.41
LAMB1-203ENST00000393560 ZNF280CQ8ND82 737 aa12.46□□□□□ -0.41
LAMB1-203ENST00000393560 PMM1Q92871 262 aa12.46□□□□□ -0.41
LAMB1-203ENST00000393560 HAUS1Q96CS2 278 aa12.46□□□□□ -0.41
LAMB1-203ENST00000393560 NAP1L3Q99457 506 aaPredicted RBP12.46□□□□□ -0.41
LAMB1-203ENST00000393560 MRPL44Q9H9J2 332 aaKnown RBP12.46□□□□□ -0.41
LAMB1-203ENST00000393560 IFT122Q9HBG6 1241 aa12.46□□□□□ -0.41
LAMB1-203ENST00000393560 CCDC87Q9NVE4 849 aa12.46□□□□□ -0.41
LAMB1-203ENST00000393560 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.46□□□□□ -0.41
LAMB1-203ENST00000393560 MTUS1Q9ULD2 1270 aa12.46□□□□□ -0.41
LAMB1-203ENST00000393560 A8MUI8 341 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 BACH1O14867 736 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 STAM2O75886 525 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 ALDH2P05091 517 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 ITGA2BP08514 1039 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 GJB2P29033 226 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 USP14P54578 494 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 CTAG1AP78358 180 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 ZNF268Q14587 947 aaPredicted RBP12.46□□□□□ -0.42
LAMB1-203ENST00000393560 CCDC153Q494R4 210 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 SYDE2Q5VT97 1194 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 SND1Q7KZF4 910 aaKnown RBP eCLIP12.46□□□□□ -0.423e-7■■■■□ 19.7
LAMB1-203ENST00000393560 FAM133AQ8N9E0 248 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 CCT6BQ92526 530 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 BRF1Q92994 677 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 LRRC59Q96AG4 307 aaKnown RBP12.46□□□□□ -0.42
LAMB1-203ENST00000393560 FNBP1Q96RU3 617 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 SPOCK3Q9BQ16 436 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 API5Q9BZZ5 524 aaKnown RBP12.46□□□□□ -0.42
LAMB1-203ENST00000393560 EURLQ9NYK6 297 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 SCOCQ9UIL1 159 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 IGSF1Q8N6C5 1336 aa12.46□□□□□ -0.42
LAMB1-203ENST00000393560 TOP1P11387 765 aaKnown RBP12.45□□□□□ -0.42
LAMB1-203ENST00000393560 ALADP13716 330 aa12.45□□□□□ -0.42
LAMB1-203ENST00000393560 ATICP31939 592 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms