RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 SMCHD1A6NHR9 2005 aa9.46□□□□□ -0.89
CASP4-201ENST00000393150 ANP32CO43423 234 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 GNAI2P04899 355 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 TAL1P17542 331 aaPredicted RBP9.46□□□□□ -0.9
CASP4-201ENST00000393150 CCL23P55773 120 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 GJA9P57773 515 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 ICA1Q05084 483 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 TMEM132BQ14DG7 1078 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 PHLDB3Q6NSJ2 640 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 Q6ZVU0 165 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 FAM126BQ8IXS8 530 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 GJD3Q8N144 294 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 ANKRD35Q8N283 1001 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 MAGEB6Q8N7X4 407 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 PHOSPHO2Q8TCD6 241 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 CLP1Q92989 425 aaKnown RBP9.46□□□□□ -0.9
CASP4-201ENST00000393150 CCDC17Q96LX7 622 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 CRBNQ96SW2 442 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 SLC9A7Q96T83 725 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 TEX13BQ9BXU2 312 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 GPR108Q9NPR9 543 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 FBXO40Q9UH90 709 aa9.46□□□□□ -0.9
CASP4-201ENST00000393150 VWA5AO00534 786 aa9.45□□□□□ -0.9
CASP4-201ENST00000393150 ZBED4O75132 1171 aa9.45□□□□□ -0.9
CASP4-201ENST00000393150 ZIC2O95409 532 aaPredicted RBP9.45□□□□□ -0.9
CASP4-201ENST00000393150 CYP2E1P05181 493 aaPredicted RBP9.45□□□□□ -0.9
CASP4-201ENST00000393150 SHMT1P34896 483 aa9.45□□□□□ -0.9
CASP4-201ENST00000393150 KCNJ6P48051 423 aa9.45□□□□□ -0.9
CASP4-201ENST00000393150 WDR4P57081 412 aaKnown RBP9.45□□□□□ -0.9
CASP4-201ENST00000393150 SWI5Q1ZZU3 235 aa9.45□□□□□ -0.9
CASP4-201ENST00000393150 BRDTQ58F21 947 aaPredicted RBP9.45□□□□□ -0.9
CASP4-201ENST00000393150 HPS1Q92902 700 aa9.45□□□□□ -0.9
CASP4-201ENST00000393150 ZNF512BQ96KM6 892 aaPredicted RBP9.45□□□□□ -0.9
CASP4-201ENST00000393150 MFSD14AQ96MC6 490 aa9.45□□□□□ -0.9
CASP4-201ENST00000393150 UPF3BQ9BZI7 483 aaKnown RBP9.45□□□□□ -0.9
CASP4-201ENST00000393150 FTOQ9C0B1 505 aaKnown RBP eCLIP9.45□□□□□ -0.9
CASP4-201ENST00000393150 VCPKMTQ9H867 229 aa9.45□□□□□ -0.9
CASP4-201ENST00000393150 ETNK1Q9HBU6 452 aa9.45□□□□□ -0.9
CASP4-201ENST00000393150 ZNF358Q9NW07 568 aa9.45□□□□□ -0.9
CASP4-201ENST00000393150 LMCD1Q9NZU5 365 aa9.45□□□□□ -0.9
CASP4-201ENST00000393150 TMX2Q9Y320 296 aa9.45□□□□□ -0.9
CASP4-201ENST00000393150 ZNF236Q9UL36 1845 aa9.45□□□□□ -0.9
CASP4-201ENST00000393150 ZNF536O15090 1300 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 M0R2N6 131 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 IPO8O15397 1037 aaKnown RBP9.44□□□□□ -0.9
CASP4-201ENST00000393150 BRD1O95696 1058 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 CA3P07451 260 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 CT47B1P0C2W7 299 aaPredicted RBP9.44□□□□□ -0.9
CASP4-201ENST00000393150 RFC2P35250 354 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 ZAP70P43403 619 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 PLCD1P51178 756 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 GDF10P55107 478 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 FOXK2Q01167 660 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 TNFAIP2Q03169 654 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 ITGA7Q13683 1181 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 TTF1Q15361 905 aaPredicted RBP9.44□□□□□ -0.9
CASP4-201ENST00000393150 CCDC144BQ3MJ40 725 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 MAMDC4Q6UXC1 1216 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 Q6ZNB5 142 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 ADGRA1Q86SQ6 560 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 FAM9BQ8IZU0 186 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 LENG1Q96BZ8 264 aaPredicted RBP9.44□□□□□ -0.9
CASP4-201ENST00000393150 KANSL2Q9H9L4 492 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 CERS4Q9HA82 394 aa9.44□□□□□ -0.9
CASP4-201ENST00000393150 NOB1Q9ULX3 412 aaKnown RBP9.44□□□□□ -0.9
CASP4-201ENST00000393150 PRRC2BQ5JSZ5 2229 aaKnown RBP9.43□□□□□ -0.9
CASP4-201ENST00000393150 CD4P01730 458 aa9.43□□□□□ -0.9
CASP4-201ENST00000393150 ADH1AP07327 375 aa9.43□□□□□ -0.9
CASP4-201ENST00000393150 MYOGP15173 224 aa9.43□□□□□ -0.9
CASP4-201ENST00000393150 NHLH1Q02575 133 aa9.43□□□□□ -0.9
CASP4-201ENST00000393150 MTX1Q13505 466 aa9.43□□□□□ -0.9
CASP4-201ENST00000393150 TNNI3KQ59H18 835 aa9.43□□□□□ -0.9
CASP4-201ENST00000393150 SNRNP48Q6IEG0 339 aaKnown RBP9.43□□□□□ -0.9
CASP4-201ENST00000393150 CCSAPQ6IQ19 270 aaPredicted RBP9.43□□□□□ -0.9
CASP4-201ENST00000393150 CYP2U1Q7Z449 544 aa9.43□□□□□ -0.9
CASP4-201ENST00000393150 KCTD17Q8N5Z5 321 aa9.43□□□□□ -0.9
CASP4-201ENST00000393150 TSEN2Q8NCE0 465 aaKnown RBP9.43□□□□□ -0.9
CASP4-201ENST00000393150 MEIS3Q99687 375 aa9.43□□□□□ -0.9
CASP4-201ENST00000393150 PRRX2Q99811 253 aa9.43□□□□□ -0.9
CASP4-201ENST00000393150 SLF1Q9BQI6 1058 aa9.43□□□□□ -0.9
CASP4-201ENST00000393150 UPF3AQ9H1J1 476 aaKnown RBP9.43□□□□□ -0.9
CASP4-201ENST00000393150 CTNNA3Q9UI47 895 aa9.43□□□□□ -0.9
CASP4-201ENST00000393150 PPP1R9AQ9ULJ8 1098 aa9.43□□□□□ -0.9
CASP4-201ENST00000393150 FPGT-TNNI3KV9GXZ4 949 aa9.43□□□□□ -0.9
CASP4-201ENST00000393150 A0A1W2PRG0 241 aa9.42□□□□□ -0.9
CASP4-201ENST00000393150 ASB14A6NK59 587 aa9.42□□□□□ -0.9
CASP4-201ENST00000393150 RFXAPO00287 272 aa9.42□□□□□ -0.9
CASP4-201ENST00000393150 GUCY1A2P33402 732 aa9.42□□□□□ -0.9
CASP4-201ENST00000393150 EPHA4P54764 986 aa9.42□□□□□ -0.9
CASP4-201ENST00000393150 OCLNQ16625 522 aa9.42□□□□□ -0.9
CASP4-201ENST00000393150 FSCN1Q16658 493 aaKnown RBP9.42□□□□□ -0.9
CASP4-201ENST00000393150 CXCL17Q6UXB2 119 aa9.42□□□□□ -0.9
CASP4-201ENST00000393150 DEFB128Q7Z7B8 93 aa9.42□□□□□ -0.9
CASP4-201ENST00000393150 CPXCR1Q8N123 301 aa9.42□□□□□ -0.9
CASP4-201ENST00000393150 PRPF38AQ8NAV1 312 aaKnown RBP9.42□□□□□ -0.9
CASP4-201ENST00000393150 DBNDD2Q9BQY9 259 aa9.42□□□□□ -0.9
CASP4-201ENST00000393150 NOC4LQ9BVI4 516 aaKnown RBP9.42□□□□□ -0.9
CASP4-201ENST00000393150 HRH3Q9Y5N1 445 aa9.42□□□□□ -0.9
CASP4-201ENST00000393150 MYADML2A6NDP7 307 aa9.41□□□□□ -0.9
CASP4-201ENST00000393150 DYNC1LI2O43237 492 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms