RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 CYTH3O43739 400 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 ADAM9Q13443 819 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 HS2ST1Q7LGA3 356 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 SRLQ86TD4 932 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 EIF3CQ99613 913 aaKnown RBP11.63□□□□□ -0.55
CALD1-203ENST00000393118 SPZ1Q9BXG8 430 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 TSGA10Q9BZW7 698 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 HOMER2Q9NSB8 354 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 AGPAT5Q9NUQ2 364 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 ADAM21Q9UKJ8 722 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 FAM237AA0A1B0GTK4 181 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 E9PMD0 336 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 MYL1P05976 194 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 SP4Q02446 784 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 RASSF7Q02833 373 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 ODF2Q5BJF6 829 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 C16orf86Q6ZW13 317 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 CSRNP1Q96S65 589 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 CCSER1Q9C0I3 900 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 SLC24A3Q9HC58 644 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 HDAC9Q9UKV0 1011 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 MRFAP1Q9Y605 127 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 MARF1Q9Y4F3 1742 aaKnown RBP11.63□□□□□ -0.55
CALD1-203ENST00000393118 PDHBP11177 359 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 KLK7P49862 253 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 ZBED6P86452 979 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 FUT2Q10981 343 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 TUBB2AQ13885 445 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 SEPT2Q15019 361 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 SFMBT2Q5VUG0 894 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 PDXDC2PQ6P474 469 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 KRT26Q7Z3Y9 468 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 MYCT1Q8N699 235 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 TUBB2BQ9BVA1 445 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 EHMT1Q9H9B1 1298 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 SWAP70Q9UH65 585 aa11.63□□□□□ -0.55
CALD1-203ENST00000393118 LIMA1Q9UHB6 759 aaKnown RBP11.63□□□□□ -0.55
CALD1-203ENST00000393118 MAGEA9P43362 315 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 SLC20A2Q08357 652 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 SF3B2Q13435 895 aaKnown RBP11.62□□□□□ -0.55
CALD1-203ENST00000393118 BRD3Q15059 726 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 CDC37Q16543 378 aaPredicted RBP11.62□□□□□ -0.55
CALD1-203ENST00000393118 MCTP2Q6DN12 878 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 FNBP4Q8N3X1 1017 aaPredicted RBP11.62□□□□□ -0.55
CALD1-203ENST00000393118 OTUD6BQ8N6M0 293 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 CCDC17Q96LX7 622 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 SCLT1Q96NL6 688 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 RTFDC1Q9BY42 306 aaPredicted RBP11.62□□□□□ -0.55
CALD1-203ENST00000393118 CXorf56Q9H5V9 222 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 STK17AQ9UEE5 414 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 ZNF142P52746 1687 aaPredicted RBP11.62□□□□□ -0.55
CALD1-203ENST00000393118 GPR75-ASB3A0A0A6YYF3 556 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 HMGB2P26583 209 aaKnown RBP11.62□□□□□ -0.55
CALD1-203ENST00000393118 INPP5BP32019 993 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 EIF4A3P38919 411 aaKnown RBP11.62□□□□□ -0.55
CALD1-203ENST00000393118 CRKP46108 304 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 ELOA2Q8IYF1 753 aaPredicted RBP11.62□□□□□ -0.55
CALD1-203ENST00000393118 LARGE2Q8N3Y3 721 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 NOX5Q96PH1 765 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 NAP1L4Q99733 375 aaKnown RBP11.62□□□□□ -0.55
CALD1-203ENST00000393118 AMNQ9BXJ7 453 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 GLT8D2Q9H1C3 349 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 L2HGDHQ9H9P8 463 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 BCCIPQ9P287 314 aaKnown RBP eCLIP11.62□□□□□ -0.55
CALD1-203ENST00000393118 PARP4Q9UKK3 1724 aaKnown RBP11.62□□□□□ -0.55
CALD1-203ENST00000393118 POTEB3A0JP26 581 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 PALM3A6NDB9 673 aaPredicted RBP11.62□□□□□ -0.55
CALD1-203ENST00000393118 POTECB2RU33 542 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 STAT3P40763 770 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 PPP4CP60510 307 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 MAN2A1Q16706 1144 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 POTEBQ6S5H4 581 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 ZMYND12Q9H0C1 365 aa11.62□□□□□ -0.55
CALD1-203ENST00000393118 TDRD3Q9H7E2 651 aaKnown RBP11.62□□□□□ -0.55
CALD1-203ENST00000393118 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.62□□□□□ -0.553e-13■■■■■ 29.2
CALD1-203ENST00000393118 KDM3AQ9Y4C1 1321 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 ALS2Q96Q42 1657 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 SLURP2P0DP57 97 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 EPB41P11171 864 aaKnown RBP11.61□□□□□ -0.55
CALD1-203ENST00000393118 EEF2P13639 858 aaKnown RBP11.61□□□□□ -0.55
CALD1-203ENST00000393118 ADRA2BP18089 450 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 GUCY2CP25092 1073 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 FKBP3Q00688 224 aaKnown RBP11.61□□□□□ -0.55
CALD1-203ENST00000393118 ASIC2Q16515 512 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 NT5DC1Q5TFE4 455 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 ARHGEF10LQ9HCE6 1279 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 PHRF1Q9P1Y6 1649 aaKnown RBP11.61□□□□□ -0.55
CALD1-203ENST00000393118 A0A0U1RQJ8 604 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 ZBTB5O15062 677 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 PLA2G4BP0C869 781 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 GYS1P13807 737 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 RPL13P26373 211 aaKnown RBP11.61□□□□□ -0.55
CALD1-203ENST00000393118 CLNS1AP54105 237 aaKnown RBP11.61□□□□□ -0.55
CALD1-203ENST00000393118 PMS1P54277 932 aaKnown RBP11.61□□□□□ -0.55
CALD1-203ENST00000393118 TUBB4BP68371 445 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 STXBP4Q6ZWJ1 553 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 MAATS1Q7Z4T9 603 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 ATRIPQ8WXE1 791 aa11.61□□□□□ -0.55
CALD1-203ENST00000393118 JPH2Q9BR39 696 aaPredicted RBP11.61□□□□□ -0.55
CALD1-203ENST00000393118 ZBTB12Q9Y330 459 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms