RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 STK24Q9Y6E0 443 aa22.46■■□□□ 1.19
PTPN11-202ENST00000392597 BICDL2A1A5D9 508 aa22.45■■□□□ 1.19
PTPN11-202ENST00000392597 FAM20AQ96MK3 541 aa22.45■■□□□ 1.19
PTPN11-202ENST00000392597 NUDT12Q9BQG2 462 aa22.45■■□□□ 1.19
PTPN11-202ENST00000392597 MAPK8IP1Q9UQF2 711 aa22.45■■□□□ 1.19
PTPN11-202ENST00000392597 ITIH6Q6UXX5 1313 aa22.45■■□□□ 1.18
PTPN11-202ENST00000392597 MYMKA6NI61 221 aa22.45■■□□□ 1.18
PTPN11-202ENST00000392597 KCNJ18B7U540 433 aa22.45■■□□□ 1.18
PTPN11-202ENST00000392597 CCP110O43303 1012 aa22.45■■□□□ 1.18
PTPN11-202ENST00000392597 EEF1GP26641 437 aaKnown RBP22.45■■□□□ 1.18
PTPN11-202ENST00000392597 KCNJ12Q14500 433 aa22.45■■□□□ 1.18
PTPN11-202ENST00000392597 TTI2Q6NXR4 508 aa22.45■■□□□ 1.18
PTPN11-202ENST00000392597 FCHSD1Q86WN1 690 aa22.45■■□□□ 1.18
PTPN11-202ENST00000392597 C16orf45Q96MC5 204 aaPredicted RBP22.45■■□□□ 1.18
PTPN11-202ENST00000392597 GPRC5DQ9NZD1 345 aa22.45■■□□□ 1.18
PTPN11-202ENST00000392597 CCNE1P24864 410 aa22.44■■□□□ 1.18
PTPN11-202ENST00000392597 NYAP1Q6ZVC0 841 aa22.44■■□□□ 1.18
PTPN11-202ENST00000392597 MICALL2Q8IY33 904 aa22.44■■□□□ 1.18
PTPN11-202ENST00000392597 MRPL11Q9Y3B7 192 aaKnown RBP22.44■■□□□ 1.18
PTPN11-202ENST00000392597 KIF2AO00139 706 aaPredicted RBP22.43■■□□□ 1.18
PTPN11-202ENST00000392597 TEX33O43247 280 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 TNNT1P13805 278 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 CCT6AP40227 531 aaKnown RBP22.43■■□□□ 1.18
PTPN11-202ENST00000392597 COPB1P53618 953 aaKnown RBP22.43■■□□□ 1.18
PTPN11-202ENST00000392597 PRR16Q569H4 304 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 E4F1Q66K89 784 aaPredicted RBP22.43■■□□□ 1.18
PTPN11-202ENST00000392597 TC2NQ8N9U0 490 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 MYRIPQ8NFW9 859 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 P2RX5Q93086 422 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 KIFC2Q96AC6 838 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 LENG9Q96B70 501 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 CNOT7Q9UIV1 285 aaKnown RBP22.43■■□□□ 1.18
PTPN11-202ENST00000392597 ABCB11O95342 1321 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 USP27XA6NNY8 438 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 STX10O60499 249 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 STK4Q13043 487 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 PSMD2Q13200 908 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 HAUS3Q68CZ6 603 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 TMEM139Q8IV31 216 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 LPAR1Q92633 364 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 TRIM47Q96LD4 638 aa22.43■■□□□ 1.18
PTPN11-202ENST00000392597 SMCHD1A6NHR9 2005 aa22.42■■□□□ 1.18
PTPN11-202ENST00000392597 WDR90Q96KV7 1748 aa22.42■■□□□ 1.18
PTPN11-202ENST00000392597 GCOM1H8Y6P7 765 aaPredicted RBP22.42■■□□□ 1.18
PTPN11-202ENST00000392597 N4BP3O15049 544 aa22.42■■□□□ 1.18
PTPN11-202ENST00000392597 ARHGAP6O43182 974 aa22.42■■□□□ 1.18
PTPN11-202ENST00000392597 CTNND1O60716 968 aaKnown RBP22.42■■□□□ 1.18
PTPN11-202ENST00000392597 EGFRP00533 1210 aa22.42■■□□□ 1.18
PTPN11-202ENST00000392597 POLR2MP0CAP2 368 aa22.42■■□□□ 1.18
PTPN11-202ENST00000392597 KCNK18Q7Z418 384 aa22.42■■□□□ 1.18
PTPN11-202ENST00000392597 IRF2BP1Q8IU81 584 aa22.42■■□□□ 1.18
PTPN11-202ENST00000392597 PANX2Q96RD6 677 aa22.42■■□□□ 1.18
PTPN11-202ENST00000392597 ZNF341Q9BYN7 854 aa22.42■■□□□ 1.18
PTPN11-202ENST00000392597 DEFB129Q9H1M3 183 aa22.42■■□□□ 1.18
PTPN11-202ENST00000392597 EHMT1Q9H9B1 1298 aa22.42■■□□□ 1.18
PTPN11-202ENST00000392597 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.42■■□□□ 1.18
PTPN11-202ENST00000392597 TRIM49BA6NDI0 452 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 COBLO75128 1261 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 HOXA13P31271 388 aaPredicted RBP22.41■■□□□ 1.18
PTPN11-202ENST00000392597 PMS1P54277 932 aaKnown RBP22.41■■□□□ 1.18
PTPN11-202ENST00000392597 SPIRE1Q08AE8 756 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 PTPN14Q15678 1187 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 ECM1Q16610 540 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 PPFIBP1Q86W92 1011 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 ERMNQ8TAM6 284 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 GJA10Q969M2 543 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 FEZ1Q99689 392 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 GLIS2Q9BZE0 524 aaPredicted RBP22.41■■□□□ 1.18
PTPN11-202ENST00000392597 KIAA1683Q9H0B3 1180 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 SCN4AP35499 1836 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 UQCRHLA0A096LP55 91 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 AKR1B15C9JRZ8 316 aaPredicted RBP22.41■■□□□ 1.18
PTPN11-202ENST00000392597 FAM86B1E9PN63 330 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 WDR46O15213 610 aaKnown RBP22.41■■□□□ 1.18
PTPN11-202ENST00000392597 TUBB4AP04350 444 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 UQCRHP07919 91 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 FAM86B2P0C5J1 330 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 EHHADHQ08426 723 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 ZYXQ15942 572 aaKnown RBP22.41■■□□□ 1.18
PTPN11-202ENST00000392597 PTPN21Q16825 1174 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 CCDC174Q6PII3 467 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 FOXR2Q6PJQ5 311 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 KIAA0895Q8NCT3 520 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 DDX12PQ92771 950 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 BAG1Q99933 345 aaPredicted RBP22.41■■□□□ 1.18
PTPN11-202ENST00000392597 PAXBP1Q9Y5B6 917 aa22.41■■□□□ 1.18
PTPN11-202ENST00000392597 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.41■■□□□ 1.182e-7■□□□□ 10.1
PTPN11-202ENST00000392597 FCER1AP12319 257 aa22.4■■□□□ 1.18
PTPN11-202ENST00000392597 TRIM14Q14142 442 aa22.4■■□□□ 1.18
PTPN11-202ENST00000392597 FAM114A1Q8IWE2 563 aa22.4■■□□□ 1.18
PTPN11-202ENST00000392597 GUF1Q8N442 669 aaKnown RBP22.4■■□□□ 1.18
PTPN11-202ENST00000392597 KCTD17Q8N5Z5 321 aa22.4■■□□□ 1.18
PTPN11-202ENST00000392597 DUSP9Q99956 384 aaKnown RBP22.4■■□□□ 1.18
PTPN11-202ENST00000392597 BMP2KQ9NSY1 1161 aaPredicted RBP22.4■■□□□ 1.18
PTPN11-202ENST00000392597 MAGEC2Q9UBF1 373 aaPredicted RBP22.4■■□□□ 1.18
PTPN11-202ENST00000392597 TAL1P17542 331 aaPredicted RBP22.39■■□□□ 1.18
PTPN11-202ENST00000392597 GTF2F1P35269 517 aaKnown RBP eCLIP22.39■■□□□ 1.18
PTPN11-202ENST00000392597 CENPPQ6IPU0 288 aa22.39■■□□□ 1.18
PTPN11-202ENST00000392597 CSGALNACT2Q8N6G5 542 aa22.39■■□□□ 1.18
PTPN11-202ENST00000392597 PPP1R13BQ96KQ4 1090 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms