RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 RHOXF2Q9BQY4 288 aa13.69□□□□□ -0.22
RFC5-201ENST00000392542 MXD3Q9BW11 206 aa13.69□□□□□ -0.22
RFC5-201ENST00000392542 NDST4Q9H3R1 872 aa13.69□□□□□ -0.22
RFC5-201ENST00000392542 RCCD1A6NED2 376 aa13.69□□□□□ -0.22
RFC5-201ENST00000392542 USP17L10C9JJH3 530 aa13.69□□□□□ -0.22
RFC5-201ENST00000392542 MPHOSPH10O00566 681 aaKnown RBP13.69□□□□□ -0.22
RFC5-201ENST00000392542 POLR3GO15318 223 aaPredicted RBP13.69□□□□□ -0.22
RFC5-201ENST00000392542 ATP1A1P05023 1023 aaKnown RBP13.69□□□□□ -0.22
RFC5-201ENST00000392542 SLC16A2P36021 539 aa13.69□□□□□ -0.22
RFC5-201ENST00000392542 SCNN1DP51172 638 aa13.69□□□□□ -0.22
RFC5-201ENST00000392542 NOA1Q8NC60 698 aaKnown RBP13.69□□□□□ -0.22
RFC5-201ENST00000392542 LACRTQ9GZZ8 138 aa13.69□□□□□ -0.22
RFC5-201ENST00000392542 GBP3Q9H0R5 595 aa13.69□□□□□ -0.22
RFC5-201ENST00000392542 HDAC6Q9UBN7 1215 aa13.69□□□□□ -0.22
RFC5-201ENST00000392542 TRPC5Q9UL62 973 aaPredicted RBP13.69□□□□□ -0.22
RFC5-201ENST00000392542 SAR1BQ9Y6B6 198 aa13.69□□□□□ -0.22
RFC5-201ENST00000392542 ENC1O14682 589 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 VAV2P52735 878 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 ATP2B2Q01814 1243 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 SEPT2Q15019 361 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 ECM1Q16610 540 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 DOK7Q18PE1 504 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 LRRC55Q6ZSA7 311 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 KCTD1Q719H9 257 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 PURBQ96QR8 312 aaKnown RBP13.68□□□□□ -0.22
RFC5-201ENST00000392542 NAP1L4Q99733 375 aaKnown RBP13.68□□□□□ -0.22
RFC5-201ENST00000392542 TSG101Q99816 390 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 EHD4Q9H223 541 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 ABCB6Q9NP58 842 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
RFC5-201ENST00000392542 VSNL1P62760 191 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 HYIQ5T013 277 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 APOBEC3HQ6NTF7 200 aaKnown RBP13.68□□□□□ -0.22
RFC5-201ENST00000392542 HDXQ7Z353 690 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 TEKT1Q969V4 418 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 DNAJC19Q96DA6 116 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 CCDC42Q96M95 316 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 TSGA10Q9BZW7 698 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 PSTPIP2Q9H939 334 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 PLAGL2Q9UPG8 496 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 KDM3AQ9Y4C1 1321 aa13.68□□□□□ -0.22
RFC5-201ENST00000392542 NRXN2Q9P2S2 1712 aa13.67□□□□□ -0.22
RFC5-201ENST00000392542 MARCH6O60337 910 aa13.67□□□□□ -0.22
RFC5-201ENST00000392542 NPR1P16066 1061 aa13.67□□□□□ -0.22
RFC5-201ENST00000392542 CYP2C19P33261 490 aa13.67□□□□□ -0.22
RFC5-201ENST00000392542 MSL3Q8N5Y2 521 aaKnown RBP13.67□□□□□ -0.22
RFC5-201ENST00000392542 CCDC17Q96LX7 622 aa13.67□□□□□ -0.22
RFC5-201ENST00000392542 GLT8D2Q9H1C3 349 aa13.67□□□□□ -0.22
RFC5-201ENST00000392542 L1RE1Q9UN81 338 aa13.67□□□□□ -0.22
RFC5-201ENST00000392542 SIPA1L1O43166 1804 aa13.67□□□□□ -0.22
RFC5-201ENST00000392542 ANO9A1A5B4 782 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 CKAP4Q07065 602 aaKnown RBP13.66□□□□□ -0.22
RFC5-201ENST00000392542 KIF5AQ12840 1032 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 NFIAQ12857 509 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 COASYQ13057 564 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 LRRC41Q15345 812 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 SPA17Q15506 151 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 WDR93Q6P2C0 686 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 CCDC84Q86UT8 332 aaPredicted RBP13.66□□□□□ -0.22
RFC5-201ENST00000392542 MYOCDQ8IZQ8 938 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 PROM2Q8N271 834 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 NT5C3AQ9H0P0 336 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.66□□□□□ -0.22
RFC5-201ENST00000392542 PCDHA12Q9UN75 941 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 ZNF263O14978 683 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 EPHB6O15197 1021 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 CYP27A1Q02318 531 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 GLIS3Q8NEA6 775 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 SECISBP2LQ93073 1101 aaKnown RBP13.66□□□□□ -0.22
RFC5-201ENST00000392542 RPGRIP1Q96KN7 1286 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 MMRN2Q9H8L6 949 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 FAM207AQ9NSI2 230 aaPredicted RBP13.66□□□□□ -0.22
RFC5-201ENST00000392542 ARHGAP20Q9P2F6 1191 aa13.66□□□□□ -0.22
RFC5-201ENST00000392542 PLEKP08567 350 aaPredicted RBP13.65□□□□□ -0.22
RFC5-201ENST00000392542 CRKP46108 304 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 USP14P54578 494 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 ZCWPW2Q504Y3 356 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 C2CD5Q86YS7 1000 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 GJA10Q969M2 543 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 MMS19Q96T76 1030 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 ZCCHC17Q9NP64 241 aaKnown RBP13.65□□□□□ -0.22
RFC5-201ENST00000392542 PANK4Q9NVE7 773 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 G3V3G9 751 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 H3BQF6 201 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 SLC26A4O43511 780 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 USO1O60763 962 aaKnown RBP13.65□□□□□ -0.22
RFC5-201ENST00000392542 SRGAP2O75044 1071 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 LCA5LO95447 670 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 SLURP2P0DP57 97 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 QRICH1Q2TAL8 776 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 FAM26FQ5R3K3 315 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 DCAF8Q5TAQ9 597 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 KRT26Q7Z3Y9 468 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 DCAF4Q8WV16 495 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 EDEM3Q9BZQ6 932 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 DNAJC18Q9H819 358 aa13.65□□□□□ -0.22
RFC5-201ENST00000392542 BMP2KQ9NSY1 1161 aaPredicted RBP13.65□□□□□ -0.22
RFC5-201ENST00000392542 COL11A2P13942 1736 aaPredicted RBP13.65□□□□□ -0.22
RFC5-201ENST00000392542 ALDH1B1P30837 517 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 EIF4A3P38919 411 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms