RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 CCDC194A0A1B0GVG4 234 aa28.98■■■□□ 2.23
HOMER3-202ENST00000392351 PDCP20941 246 aa28.98■■■□□ 2.23
HOMER3-202ENST00000392351 ZNF333Q96JL9 665 aa28.98■■■□□ 2.23
HOMER3-202ENST00000392351 VTA1Q9NP79 307 aa28.98■■■□□ 2.23
HOMER3-202ENST00000392351 TSHZ2Q9NRE2 1034 aa28.98■■■□□ 2.23
HOMER3-202ENST00000392351 EIF3JO75822 258 aaKnown RBP28.97■■■□□ 2.23
HOMER3-202ENST00000392351 ZNF865P0CJ78 1059 aaPredicted RBP28.97■■■□□ 2.23
HOMER3-202ENST00000392351 MRPS9P82933 396 aaKnown RBP28.97■■■□□ 2.23
HOMER3-202ENST00000392351 ARHGAP4P98171 946 aa28.97■■■□□ 2.23
HOMER3-202ENST00000392351 NONOQ15233 471 aaKnown RBP eCLIP28.97■■■□□ 2.23
HOMER3-202ENST00000392351 XRRA1Q6P2D8 792 aa28.97■■■□□ 2.23
HOMER3-202ENST00000392351 CNGA1P29973 690 aa28.96■■■□□ 2.23
HOMER3-202ENST00000392351 CCND3P30281 292 aaPredicted RBP28.96■■■□□ 2.23
HOMER3-202ENST00000392351 GNL2Q13823 731 aaKnown RBP28.96■■■□□ 2.23
HOMER3-202ENST00000392351 MTFR1Q15390 333 aa28.96■■■□□ 2.23
HOMER3-202ENST00000392351 PIK3AP1Q6ZUJ8 805 aa28.96■■■□□ 2.23
HOMER3-202ENST00000392351 TNFRSF25Q93038 417 aa28.96■■■□□ 2.23
HOMER3-202ENST00000392351 HMX1Q9NP08 348 aaPredicted RBP28.96■■■□□ 2.23
HOMER3-202ENST00000392351 BRCA2P51587 3418 aa28.96■■■□□ 2.23
HOMER3-202ENST00000392351 TBCKQ8TEA7 893 aa28.96■■■□□ 2.23
HOMER3-202ENST00000392351 RTEL1Q9NZ71 1219 aa28.96■■■□□ 2.23
HOMER3-202ENST00000392351 EARS2Q5JPH6 523 aaKnown RBP28.95■■■□□ 2.22
HOMER3-202ENST00000392351 SEPT14Q6ZU15 432 aa28.95■■■□□ 2.22
HOMER3-202ENST00000392351 CRYGNQ8WXF5 182 aa28.95■■■□□ 2.22
HOMER3-202ENST00000392351 UNC93B1Q9H1C4 597 aa28.95■■■□□ 2.22
HOMER3-202ENST00000392351 FOXP1Q9H334 677 aaPredicted RBP28.95■■■□□ 2.22
HOMER3-202ENST00000392351 PDGFCQ9NRA1 345 aa28.95■■■□□ 2.22
HOMER3-202ENST00000392351 STAM2O75886 525 aa28.94■■■□□ 2.22
HOMER3-202ENST00000392351 SYT1P21579 422 aa28.94■■■□□ 2.22
HOMER3-202ENST00000392351 INF2Q27J81 1249 aa28.94■■■□□ 2.22
HOMER3-202ENST00000392351 CCDC144BQ3MJ40 725 aa28.94■■■□□ 2.22
HOMER3-202ENST00000392351 MCTP1Q6DN14 999 aa28.94■■■□□ 2.22
HOMER3-202ENST00000392351 TAPT1Q6NXT6 567 aa28.94■■■□□ 2.22
HOMER3-202ENST00000392351 FRMPD3Q5JV73 1810 aa28.93■■■□□ 2.22
HOMER3-202ENST00000392351 VPS37CA5D8V6 355 aaPredicted RBP28.93■■■□□ 2.22
HOMER3-202ENST00000392351 FAM205CA6NFA0 338 aa28.93■■■□□ 2.22
HOMER3-202ENST00000392351 RGS20O76081 388 aa28.93■■■□□ 2.22
HOMER3-202ENST00000392351 CCL5P13501 91 aa28.93■■■□□ 2.22
HOMER3-202ENST00000392351 KIF28PB7ZC32 967 aa28.92■■■□□ 2.22
HOMER3-202ENST00000392351 SEPT4O43236 478 aa28.92■■■□□ 2.22
HOMER3-202ENST00000392351 CYP3A4P08684 503 aa28.92■■■□□ 2.22
HOMER3-202ENST00000392351 ADCYAP1R1P41586 468 aa28.92■■■□□ 2.22
HOMER3-202ENST00000392351 INPP4AQ96PE3 977 aaPredicted RBP28.92■■■□□ 2.22
HOMER3-202ENST00000392351 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.92■■■□□ 2.22
HOMER3-202ENST00000392351 RNF208Q9H0X6 261 aa28.92■■■□□ 2.22
HOMER3-202ENST00000392351 AKR1A1P14550 325 aa28.92■■■□□ 2.22
HOMER3-202ENST00000392351 ZNF76P36508 570 aa28.92■■■□□ 2.22
HOMER3-202ENST00000392351 GNPTABQ3T906 1256 aa28.92■■■□□ 2.22
HOMER3-202ENST00000392351 NOSTRINQ8IVI9 506 aa28.92■■■□□ 2.22
HOMER3-202ENST00000392351 FAM184BQ9ULE4 1060 aa28.92■■■□□ 2.22
HOMER3-202ENST00000392351 RBM19Q9Y4C8 960 aaKnown RBP28.92■■■□□ 2.22
HOMER3-202ENST00000392351 ITGB5P18084 799 aa28.91■■■□□ 2.22
HOMER3-202ENST00000392351 U2AF2P26368 475 aaKnown RBP eCLIP28.91■■■□□ 2.224e-7■■■□□ 17.8
HOMER3-202ENST00000392351 SCFD2Q8WU76 684 aa28.91■■■□□ 2.22
HOMER3-202ENST00000392351 UBIAD1Q9Y5Z9 338 aa28.91■■■□□ 2.22
HOMER3-202ENST00000392351 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.9■■■□□ 2.22
HOMER3-202ENST00000392351 USP11P51784 963 aa28.9■■■□□ 2.22
HOMER3-202ENST00000392351 CEP55Q53EZ4 464 aa28.9■■■□□ 2.22
HOMER3-202ENST00000392351 NEK8Q86SG6 692 aa28.9■■■□□ 2.22
HOMER3-202ENST00000392351 CYP2W1Q8TAV3 490 aa28.9■■■□□ 2.22
HOMER3-202ENST00000392351 WDR11Q9BZH6 1224 aa28.9■■■□□ 2.22
HOMER3-202ENST00000392351 MRVI1Q9Y6F6 885 aa28.9■■■□□ 2.22
HOMER3-202ENST00000392351 RBM47A0AV96 593 aaKnown RBP28.89■■■□□ 2.22
HOMER3-202ENST00000392351 STX6O43752 255 aa28.89■■■□□ 2.22
HOMER3-202ENST00000392351 ANO1Q5XXA6 986 aa28.89■■■□□ 2.22
HOMER3-202ENST00000392351 NLRX1Q86UT6 975 aa28.89■■■□□ 2.22
HOMER3-202ENST00000392351 MXRA8Q9BRK3 442 aa28.89■■■□□ 2.22
HOMER3-202ENST00000392351 PAK6Q9NQU5 681 aaPredicted RBP28.89■■■□□ 2.22
HOMER3-202ENST00000392351 DDX20Q9UHI6 824 aaKnown RBP28.89■■■□□ 2.22
HOMER3-202ENST00000392351 KIAA0100Q14667 2235 aaKnown RBP28.89■■■□□ 2.22
HOMER3-202ENST00000392351 DOCK5Q9H7D0 1870 aa28.89■■■□□ 2.22
HOMER3-202ENST00000392351 FAM86B1E9PN63 330 aa28.88■■■□□ 2.21
HOMER3-202ENST00000392351 ADCY6O43306 1168 aa28.88■■■□□ 2.21
HOMER3-202ENST00000392351 EDIL3O43854 480 aa28.88■■■□□ 2.21
HOMER3-202ENST00000392351 FAM86B2P0C5J1 330 aa28.88■■■□□ 2.21
HOMER3-202ENST00000392351 TNFAIP2Q03169 654 aa28.88■■■□□ 2.21
HOMER3-202ENST00000392351 TTLL4Q14679 1199 aa28.88■■■□□ 2.21
HOMER3-202ENST00000392351 IQSEC1Q6DN90 963 aa28.88■■■□□ 2.21
HOMER3-202ENST00000392351 LENG1Q96BZ8 264 aaPredicted RBP28.88■■■□□ 2.21
HOMER3-202ENST00000392351 GPRASP2Q96D09 838 aa28.88■■■□□ 2.21
HOMER3-202ENST00000392351 ARIH2O95376 493 aa28.88■■■□□ 2.21
HOMER3-202ENST00000392351 TXNP10599 105 aaKnown RBP28.88■■■□□ 2.21
HOMER3-202ENST00000392351 MTMR1Q13613 665 aa28.88■■■□□ 2.21
HOMER3-202ENST00000392351 LETM2Q2VYF4 491 aa28.88■■■□□ 2.21
HOMER3-202ENST00000392351 TMEM63BQ5T3F8 832 aa28.88■■■□□ 2.21
HOMER3-202ENST00000392351 JADE2Q9NQC1 790 aa28.88■■■□□ 2.21
HOMER3-202ENST00000392351 FIBPO43427 364 aa28.87■■■□□ 2.21
HOMER3-202ENST00000392351 MSCO60682 206 aa28.87■■■□□ 2.21
HOMER3-202ENST00000392351 SMPD1P17405 629 aa28.87■■■□□ 2.21
HOMER3-202ENST00000392351 CIITAP33076 1130 aa28.87■■■□□ 2.21
HOMER3-202ENST00000392351 SEMA3FQ13275 785 aa28.86■■■□□ 2.21
HOMER3-202ENST00000392351 LY6KQ17RY6 165 aa28.86■■■□□ 2.21
HOMER3-202ENST00000392351 DUSP28Q4G0W2 176 aa28.86■■■□□ 2.21
HOMER3-202ENST00000392351 GJC2Q5T442 439 aaPredicted RBP28.86■■■□□ 2.21
HOMER3-202ENST00000392351 CCDC62Q6P9F0 684 aa28.86■■■□□ 2.21
HOMER3-202ENST00000392351 KCNV1Q6PIU1 500 aa28.86■■■□□ 2.21
HOMER3-202ENST00000392351 FERMT3Q86UX7 667 aa28.86■■■□□ 2.21
HOMER3-202ENST00000392351 DEFB118Q96PH6 123 aa28.86■■■□□ 2.21
HOMER3-202ENST00000392351 DAXXQ9UER7 740 aaPredicted RBP28.86■■■□□ 2.21
HOMER3-202ENST00000392351 MTMR6Q9Y217 621 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms